RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PDCD11Q14690 1871 aaKnown RBP3.2□□□□□ -1.9
SDCBP-213ENST00000630925 CABIN1Q9Y6J0 2220 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 KIAA2026Q5HYC2 2103 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 MED13Q9UHV7 2174 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.2□□□□□ -1.9
SDCBP-213ENST00000630925 H7BZZ5 65 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 DNAH10OSP0CZ25 163 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 Q1RN00 199 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 Q6ZQT0 140 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 SCRT1Q9BWW7 348 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 SMAD5-AS1Q9Y6J3 95 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 STAB1Q9NY15 2570 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 ABCA7Q8IZY2 2146 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 A0A0B4J2C4 111 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 TCRBV4S1A1TA0A5B7 111 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 CRYM-AS1A6NIL9 109 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 UBE2G1P62253 170 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 ZNF117Q03924 483 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 C9orf47Q6ZRZ4 202 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 SMIM7Q9BQ49 75 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 NHP2Q9NX24 153 aaKnown RBP3.2□□□□□ -1.9
SDCBP-213ENST00000630925 ZNRD1Q9P1U0 126 aa3.2□□□□□ -1.9
SDCBP-213ENST00000630925 TRAV7A0A075B6U4 112 aa3.19□□□□□ -1.9
SDCBP-213ENST00000630925 TRAV3A0A0B4J244 114 aa3.19□□□□□ -1.9
SDCBP-213ENST00000630925 F2Z2F3 143 aa3.19□□□□□ -1.9
SDCBP-213ENST00000630925 NDUFC1O43677 76 aa3.19□□□□□ -1.9
SDCBP-213ENST00000630925 SMIM13P0DJ93 91 aa3.19□□□□□ -1.9
SDCBP-213ENST00000630925 HOXB6P17509 224 aaKnown RBP3.19□□□□□ -1.9
SDCBP-213ENST00000630925 FXYD2P54710 66 aa3.19□□□□□ -1.9
SDCBP-213ENST00000630925 SNRPFP62306 86 aaKnown RBP3.19□□□□□ -1.9
SDCBP-213ENST00000630925 TMEM136Q6ZRR5 245 aa3.19□□□□□ -1.9
SDCBP-213ENST00000630925 MUC4Q99102 2169 aa3.19□□□□□ -1.9
SDCBP-213ENST00000630925 TRBV10-2A0A0K0K1G8 114 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 LHBP01229 141 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 CRPP02741 224 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 ZNF79Q15937 498 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 FAM27BQ5VT28 67 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 RPRMLQ8N4K4 120 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 CMTM2Q8TAZ6 248 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 SCN3AQ9NY46 2000 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 TRAV13-2A0A0B4J235 113 aa3.18□□□□□ -1.9
SDCBP-213ENST00000630925 RPL36AP83881 106 aaKnown RBP3.18□□□□□ -1.9
SDCBP-213ENST00000630925 KIAA1549LQ6ZVL6 1849 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 RYR3Q15413 4870 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 NNATQ16517 81 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 CYP2G1PQ6ZSU1 146 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 TRAPPC1Q9Y5R8 145 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 TMEM14AQ9Y6G1 99 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 V9GYH0 126 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 GOLGA4Q13439 2230 aaKnown RBP3.17□□□□□ -1.9
SDCBP-213ENST00000630925 CUBNO60494 3623 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 AGRNO00468 2067 aa3.17□□□□□ -1.9
SDCBP-213ENST00000630925 PIGBOS1A0A0B4J2F0 54 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 C15orf32Q32M92 178 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 C9orf116Q5BN46 136 aaPredicted RBP3.16□□□□□ -1.9
SDCBP-213ENST00000630925 C9orf129Q5T035 196 aaKnown RBP3.16□□□□□ -1.9
SDCBP-213ENST00000630925 SPANXA2-OT1Q8N9U9 137 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 FAM215AQ9Y5M1 114 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 NBASA2RRP1 2371 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 PANO1I0J062 215 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 SLC48A1Q6P1K1 146 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 ZCCHC23Q6ZST2 131 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 JMJD1CQ15652 2540 aa3.16□□□□□ -1.9
SDCBP-213ENST00000630925 ZNF469Q96JG9 3925 aaPredicted RBP3.15□□□□□ -1.9
SDCBP-213ENST00000630925 HCG22E2RYF7 251 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 H3BPC8 53 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 ACYP1P07311 99 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 PI4KAP42356 2102 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 KLKP1Q107X0 134 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 KIF26BQ2KJY2 2108 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 RPL7L1Q6DKI1 246 aaKnown RBP3.15□□□□□ -1.9
SDCBP-213ENST00000630925 CRIP3Q6Q6R5 217 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 Q6ZR54 194 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 LINC00643Q86TS7 51 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 ZNF355PQ9NSJ1 428 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 TIMM9Q9Y5J7 89 aa3.15□□□□□ -1.9
SDCBP-213ENST00000630925 A0A0G2JND7 137 aa3.15□□□□□ -1.91
SDCBP-213ENST00000630925 H7C2G1 150 aa3.15□□□□□ -1.91
SDCBP-213ENST00000630925 EIF4EBP1Q13541 118 aaPredicted RBP3.15□□□□□ -1.91
SDCBP-213ENST00000630925 C20orf166-AS1Q96NR2 134 aa3.15□□□□□ -1.91
SDCBP-213ENST00000630925 CYP4F30PQ9H0H9 118 aa3.15□□□□□ -1.91
SDCBP-213ENST00000630925 COL6A5A8TX70 2615 aa3.15□□□□□ -1.91
SDCBP-213ENST00000630925 MEGF8Q7Z7M0 2845 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 PKD1L1Q8TDX9 2849 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 MALRD1Q5VYJ5 2156 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 CCDC168Q8NDH2 2452 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 IGKV1D-42A0A075B6H8 117 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 BCE1O60756 84 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 DSCR4P56555 118 aaPredicted RBP3.14□□□□□ -1.91
SDCBP-213ENST00000630925 TMEM170BQ5T4T1 132 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 FAM223AQ8IWN6 122 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 BPESC1Q9GZL8 116 aa3.14□□□□□ -1.91
SDCBP-213ENST00000630925 FLNAP21333 2647 aaKnown RBP3.14□□□□□ -1.91
SDCBP-213ENST00000630925 H3BQ85 93 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 P0C880 135 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 NBEAL2Q6ZNJ1 2754 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 DEFB119Q8N690 84 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 DIDO1Q9BTC0 2240 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms