RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 A6NDX4 124 aa7.92□□□□□ -1.14
CDH1-214ENST00000621016 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
CDH1-214ENST00000621016 SOCS3O14543 225 aa7.92□□□□□ -1.14
CDH1-214ENST00000621016 P0DMU3 169 aa7.92□□□□□ -1.14
CDH1-214ENST00000621016 FAM231AP0DMU4 169 aa7.92□□□□□ -1.14
CDH1-214ENST00000621016 FAM231CP0DMU5 169 aa7.92□□□□□ -1.14
CDH1-214ENST00000621016 NBEAL2Q6ZNJ1 2754 aa7.92□□□□□ -1.14
CDH1-214ENST00000621016 ZNF876PQ49A33 203 aa7.91□□□□□ -1.14
CDH1-214ENST00000621016 MRPL53Q96EL3 112 aaKnown RBP7.91□□□□□ -1.14
CDH1-214ENST00000621016 IGHV3OR16-12A0A075B7B8 117 aa7.91□□□□□ -1.14
CDH1-214ENST00000621016 C18orf65Q6ZTR6 163 aa7.91□□□□□ -1.14
CDH1-214ENST00000621016 RNF223E7ERA6 249 aa7.91□□□□□ -1.14
CDH1-214ENST00000621016 PROK1P58294 105 aa7.91□□□□□ -1.14
CDH1-214ENST00000621016 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
CDH1-214ENST00000621016 TOMM6Q96B49 74 aa7.91□□□□□ -1.14
CDH1-214ENST00000621016 B4DSR2 109 aa7.9□□□□□ -1.14
CDH1-214ENST00000621016 LINC00482Q8N8I6 264 aa7.9□□□□□ -1.14
CDH1-214ENST00000621016 CRYGAP11844 174 aa7.9□□□□□ -1.15
CDH1-214ENST00000621016 SNRPD3P62318 126 aaKnown RBP7.9□□□□□ -1.15
CDH1-214ENST00000621016 PEMTQ9UBM1 199 aa7.9□□□□□ -1.15
CDH1-214ENST00000621016 C19orf54Q5BKX5 351 aa7.89□□□□□ -1.15
CDH1-214ENST00000621016 S100A7L2Q5SY68 101 aa7.89□□□□□ -1.15
CDH1-214ENST00000621016 DCANP1Q8TF63 244 aa7.89□□□□□ -1.15
CDH1-214ENST00000621016 Q9UF83 564 aa7.89□□□□□ -1.15
CDH1-214ENST00000621016 ZNF580Q9UK33 172 aa7.89□□□□□ -1.15
CDH1-214ENST00000621016 ITPR3Q14573 2671 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 IGHV4-4A0A075B6R2 117 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 A0A0U1RRA0 63 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 IGHV4OR15-8A0A075B7B6 117 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 A0A087WW49 117 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 IGHV3-16A0A0C4DH30 117 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 TSHBP01222 138 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 LGALS3P17931 250 aaKnown RBP7.88□□□□□ -1.15
CDH1-214ENST00000621016 LENEPQ9Y5L5 61 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 SLURP1P55000 103 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 TMEM258P61165 79 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 PRORYQ9H606 182 aa7.88□□□□□ -1.15
CDH1-214ENST00000621016 IGHV3-38A0A0C4DH36 116 aa7.87□□□□□ -1.15
CDH1-214ENST00000621016 CRYGDP07320 174 aa7.87□□□□□ -1.15
CDH1-214ENST00000621016 DEFB131AP59861 70 aa7.87□□□□□ -1.15
CDH1-214ENST00000621016 HIST1H4AP62805 103 aaKnown RBP7.87□□□□□ -1.15
CDH1-214ENST00000621016 SS18Q15532 418 aa7.87□□□□□ -1.15
CDH1-214ENST00000621016 TMEM263Q8WUH6 116 aaKnown RBP7.87□□□□□ -1.15
CDH1-214ENST00000621016 VCYO14598 125 aa7.87□□□□□ -1.15
CDH1-214ENST00000621016 HOXD3P31249 432 aaPredicted RBP7.87□□□□□ -1.15
CDH1-214ENST00000621016 LINC01546A6NGU7 62 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 IGLV1-40P01703 118 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 FHL2Q14192 279 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 APRG1Q8IVJ8 170 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 COX6B1P14854 86 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 LINC00315P59091 139 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 DAND5Q8N907 189 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 SLC25A29Q8N8R3 303 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 WFDC9Q8NEX5 89 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 APCP25054 2843 aa7.86□□□□□ -1.15
CDH1-214ENST00000621016 A0A0J9YXV3 536 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 C20orf197Q8N268 126 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 KLLNB2CW77 178 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 NXPH4O95158 308 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 LINC00643Q86TS7 51 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 IGHV1OR15-1A0A075B7D0 117 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 TRAV12-1A0A0B4J245 112 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 A8MZ25 164 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 PSMB8P28062 276 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 TMEM243Q9BU79 118 aa7.85□□□□□ -1.15
CDH1-214ENST00000621016 GCN1Q92616 2671 aaKnown RBP7.84□□□□□ -1.15
CDH1-214ENST00000621016 A0A0J9YX75 114 aa7.84□□□□□ -1.15
CDH1-214ENST00000621016 ATOX1O00244 68 aa7.84□□□□□ -1.15
CDH1-214ENST00000621016 COX6CP09669 75 aa7.84□□□□□ -1.15
CDH1-214ENST00000621016 KRTAP10-9P60411 292 aa7.84□□□□□ -1.15
CDH1-214ENST00000621016 ICOSQ9Y6W8 199 aa7.84□□□□□ -1.15
CDH1-214ENST00000621016 KIF25-AS1Q9Y6Z4 181 aa7.84□□□□□ -1.15
CDH1-214ENST00000621016 ITPR2Q14571 2701 aa7.84□□□□□ -1.15
CDH1-214ENST00000621016 C9orf85Q96MD7 179 aa7.84□□□□□ -1.15
CDH1-214ENST00000621016 IGLV4-69A0A075B6H9 119 aa7.83□□□□□ -1.16
CDH1-214ENST00000621016 RBM3P98179 157 aaKnown RBP7.83□□□□□ -1.16
CDH1-214ENST00000621016 POLR2KP53803 58 aaKnown RBP7.83□□□□□ -1.16
CDH1-214ENST00000621016 UBE2E2Q96LR5 201 aa7.83□□□□□ -1.16
CDH1-214ENST00000621016 IGIPA6NJ69 53 aa7.83□□□□□ -1.16
CDH1-214ENST00000621016 LINC01619G3V211 115 aa7.83□□□□□ -1.16
CDH1-214ENST00000621016 PPP1R17O96001 155 aa7.83□□□□□ -1.16
CDH1-214ENST00000621016 ZNF625Q96I27 306 aaPredicted RBP7.83□□□□□ -1.16
CDH1-214ENST00000621016 M0QY20 66 aa7.82□□□□□ -1.16
CDH1-214ENST00000621016 ZNF469Q96JG9 3925 aaPredicted RBP7.82□□□□□ -1.16
CDH1-214ENST00000621016 IGHV3-53P01767 116 aa7.82□□□□□ -1.16
CDH1-214ENST00000621016 HILS1P60008 231 aa7.82□□□□□ -1.16
CDH1-214ENST00000621016 SETXQ7Z333 2677 aaKnown RBP7.82□□□□□ -1.16
CDH1-214ENST00000621016 I3L3M4 83 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 RBMY1A1P0DJD3 496 aaKnown RBP7.81□□□□□ -1.16
CDH1-214ENST00000621016 RBMY1CP0DJD4 496 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 RBMY1FQ15415 496 aaKnown RBP7.81□□□□□ -1.16
CDH1-214ENST00000621016 LINC01356Q8N9X3 169 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 XCL2Q9UBD3 114 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.81□□□□□ -1.16
CDH1-214ENST00000621016 IGKV2-29A2NJV5 120 aaPredicted RBP7.81□□□□□ -1.16
CDH1-214ENST00000621016 CD28P10747 220 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 RPL18AQ02543 176 aaKnown RBP7.81□□□□□ -1.16
CDH1-214ENST00000621016 DAZ2Q13117 558 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms