RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 HIGD2BQ4VC39 106 aa7.54□□□□□ -1.2
UPF3B-204ENST00000619445 MRPL52Q86TS9 123 aaKnown RBP7.54□□□□□ -1.2
UPF3B-204ENST00000619445 SMIM7Q9BQ49 75 aa7.54□□□□□ -1.2
UPF3B-204ENST00000619445 TRBV27A0A0K0K1C4 114 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 LINC00959A0A1B0GUT2 108 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 C7orf77A4D0Y5 90 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 HIGD1CA8MV81 97 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 XCL1P47992 114 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 CEBPGP53567 150 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 ALKAL2Q6UX46 152 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 ISOC2Q96AB3 205 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 EIF5A2Q9GZV4 153 aaKnown RBP7.53□□□□□ -1.2
UPF3B-204ENST00000619445 OSTCQ9NRP0 149 aa7.53□□□□□ -1.2
UPF3B-204ENST00000619445 IGKV2-24A0A0C4DH68 120 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 ZNF561-AS1K7EIQ3 104 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 VCYO14598 125 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 PHOX2AO14813 284 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 TSHBP01222 138 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 POLR2KP53803 58 aaKnown RBP7.52□□□□□ -1.21
UPF3B-204ENST00000619445 RIGQ13278 110 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 CD164L2Q6UWJ8 174 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 LINC01551Q86U37 167 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 STPG4Q8N801 248 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 PRSS3P2Q8NHM4 247 aa7.52□□□□□ -1.21
UPF3B-204ENST00000619445 ZNF727A8MUV8 499 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 C1orf196B1AJZ1 125 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 PPP1R2P9O14990 202 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 FCER1GP30273 86 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 ZNF664Q8N3J9 261 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 CARD19Q96LW7 228 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 KIR2DL4Q99706 377 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 TMEM242Q9NWH2 141 aa7.51□□□□□ -1.21
UPF3B-204ENST00000619445 CSDC2Q9Y534 153 aaKnown RBP7.51□□□□□ -1.21
UPF3B-204ENST00000619445 LCE2BO14633 110 aa7.5□□□□□ -1.21
UPF3B-204ENST00000619445 TCAPO15273 167 aa7.5□□□□□ -1.21
UPF3B-204ENST00000619445 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
UPF3B-204ENST00000619445 TMEM18Q96B42 140 aa7.5□□□□□ -1.21
UPF3B-204ENST00000619445 GHRHP01286 108 aa7.49□□□□□ -1.21
UPF3B-204ENST00000619445 RAB4AP20338 218 aa7.49□□□□□ -1.21
UPF3B-204ENST00000619445 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
UPF3B-204ENST00000619445 FAM74A3Q4VXF1 159 aa7.49□□□□□ -1.21
UPF3B-204ENST00000619445 A0A096LNI7 61 aa7.48□□□□□ -1.21
UPF3B-204ENST00000619445 A0A1B0GW15 77 aa7.48□□□□□ -1.21
UPF3B-204ENST00000619445 MALP21145 153 aa7.48□□□□□ -1.21
UPF3B-204ENST00000619445 SUMO2P61956 95 aaKnown RBP7.48□□□□□ -1.21
UPF3B-204ENST00000619445 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
UPF3B-204ENST00000619445 NAT8BQ9UHF3 227 aa7.48□□□□□ -1.21
UPF3B-204ENST00000619445 LINC00862A6NCI5 91 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 COX7A2LO14548 114 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 APOMO95445 188 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 CAMPP49913 170 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 SPINK6Q6UWN8 80 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 Q6ZRP5 223 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 LINC01600Q96MT4 127 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 TIMM21Q9BVV7 248 aa7.47□□□□□ -1.21
UPF3B-204ENST00000619445 LOC107984640A0A0U1RRK4 108 aa7.46□□□□□ -1.21
UPF3B-204ENST00000619445 TMEM241Q24JQ0 296 aa7.46□□□□□ -1.21
UPF3B-204ENST00000619445 V9GYV3 84 aa7.46□□□□□ -1.21
UPF3B-204ENST00000619445 UBR4Q5T4S7 5183 aa7.46□□□□□ -1.22
UPF3B-204ENST00000619445 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
UPF3B-204ENST00000619445 GAS8-AS1O95177 125 aa7.46□□□□□ -1.22
UPF3B-204ENST00000619445 S100A8P05109 93 aa7.46□□□□□ -1.22
UPF3B-204ENST00000619445 SRP19P09132 144 aaKnown RBP7.46□□□□□ -1.22
UPF3B-204ENST00000619445 RPL32P62910 135 aaKnown RBP7.46□□□□□ -1.22
UPF3B-204ENST00000619445 NUP35Q8NFH5 326 aa7.46□□□□□ -1.22
UPF3B-204ENST00000619445 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
UPF3B-204ENST00000619445 C20orf78Q9BR46 151 aa7.46□□□□□ -1.22
UPF3B-204ENST00000619445 F8WDY8 70 aa7.45□□□□□ -1.22
UPF3B-204ENST00000619445 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
UPF3B-204ENST00000619445 FAM104BQ5XKR9 115 aa7.45□□□□□ -1.22
UPF3B-204ENST00000619445 NRACQ8N912 160 aa7.45□□□□□ -1.22
UPF3B-204ENST00000619445 CAMK2N2Q96S95 79 aa7.45□□□□□ -1.22
UPF3B-204ENST00000619445 SMDT1Q9H4I9 107 aa7.45□□□□□ -1.22
UPF3B-204ENST00000619445 UBE2D4Q9Y2X8 147 aa7.45□□□□□ -1.22
UPF3B-204ENST00000619445 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
UPF3B-204ENST00000619445 NAT8Q9UHE5 227 aa7.44□□□□□ -1.22
UPF3B-204ENST00000619445 TMA7Q9Y2S6 64 aaKnown RBP7.44□□□□□ -1.22
UPF3B-204ENST00000619445 A0A0J9YXV3 536 aa7.43□□□□□ -1.22
UPF3B-204ENST00000619445 F8W036 122 aa7.43□□□□□ -1.22
UPF3B-204ENST00000619445 RNF151Q2KHN1 245 aa7.43□□□□□ -1.22
UPF3B-204ENST00000619445 OR10D4PQ8NGN7 298 aa7.43□□□□□ -1.22
UPF3B-204ENST00000619445 LINC00526Q96FQ7 95 aa7.43□□□□□ -1.22
UPF3B-204ENST00000619445 hCG_2014768A0A024R1R8 64 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 TRAV13-1A0A0B4J241 112 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 SMIM27A0A1W2PRY6 76 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 SMKR1H3BMG3 65 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 PPBPP02775 128 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 CKS2P33552 79 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 RPL23P62829 140 aaKnown RBP7.42□□□□□ -1.22
UPF3B-204ENST00000619445 GAGE2BQ13066 116 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 PEA15Q15121 130 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 ADIRFQ15847 76 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 MRPL51Q4U2R6 128 aaKnown RBP7.42□□□□□ -1.22
UPF3B-204ENST00000619445 SPANXA1Q9NS26 97 aa7.42□□□□□ -1.22
UPF3B-204ENST00000619445 SPAG11BQ08648 103 aa7.4□□□□□ -1.22
UPF3B-204ENST00000619445 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
UPF3B-204ENST00000619445 Q6ZUT4 128 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms