RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 UBE2D4Q9Y2X8 147 aa18.13■□□□□ 0.49
VEGFC-202ENST00000618562 PLAC8L1A1L4L8 177 aa18.12■□□□□ 0.49
VEGFC-202ENST00000618562 WIPF1O43516 503 aa18.12■□□□□ 0.49
VEGFC-202ENST00000618562 TRGV1A0A0A0MS02 117 aa18.11■□□□□ 0.49
VEGFC-202ENST00000618562 TSPAN13O95857 204 aa18.11■□□□□ 0.49
VEGFC-202ENST00000618562 COTL1Q14019 142 aa18.11■□□□□ 0.49
VEGFC-202ENST00000618562 C16orf74Q96GX8 76 aa18.11■□□□□ 0.49
VEGFC-202ENST00000618562 CEMP1Q6PRD7 247 aaPredicted RBP18.1■□□□□ 0.49
VEGFC-202ENST00000618562 APOMO95445 188 aa18.1■□□□□ 0.49
VEGFC-202ENST00000618562 GAGE13Q4V321 117 aa18.09■□□□□ 0.49
VEGFC-202ENST00000618562 Q6ZTI0 123 aa18.09■□□□□ 0.49
VEGFC-202ENST00000618562 TIMM21Q9BVV7 248 aa18.09■□□□□ 0.49
VEGFC-202ENST00000618562 TINCRA0A1B0GVN0 87 aa18.08■□□□□ 0.49
VEGFC-202ENST00000618562 RPL24P83731 157 aaKnown RBP18.08■□□□□ 0.49
VEGFC-202ENST00000618562 DAZ2Q13117 558 aaKnown RBP18.08■□□□□ 0.49
VEGFC-202ENST00000618562 LYRM7Q5U5X0 104 aa18.08■□□□□ 0.49
VEGFC-202ENST00000618562 NOP10Q9NPE3 64 aaKnown RBP18.08■□□□□ 0.49
VEGFC-202ENST00000618562 IGHV3-64A0A075B6Q5 118 aa18.08■□□□□ 0.48
VEGFC-202ENST00000618562 CFC1BP0CG36 223 aa18.08■□□□□ 0.48
VEGFC-202ENST00000618562 CFC1P0CG37 223 aa18.08■□□□□ 0.48
VEGFC-202ENST00000618562 TEX48A0A1B0GUV7 120 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 TMEM238C9JI98 176 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 IGHV3-30-3P0DP02 117 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 UBE2D3P61077 147 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 UBE2D2P62837 147 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 C3orf56Q8N813 242 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 STAB1Q9NY15 2570 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.07■□□□□ 0.48
VEGFC-202ENST00000618562 IGKV2-29A2NJV5 120 aaPredicted RBP18.07■□□□□ 0.48
VEGFC-202ENST00000618562 WFDC2Q14508 124 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 PRO0461Q9UI25 63 aa18.07■□□□□ 0.48
VEGFC-202ENST00000618562 C10orf126Q8N4M7 172 aa18.05■□□□□ 0.48
VEGFC-202ENST00000618562 IGHV3-38A0A0C4DH36 116 aa18.04■□□□□ 0.48
VEGFC-202ENST00000618562 IGHV1-58A0A0C4DH39 117 aa18.04■□□□□ 0.48
VEGFC-202ENST00000618562 Q6ZUT4 128 aa18.04■□□□□ 0.48
VEGFC-202ENST00000618562 RNASE13Q5GAN3 156 aaKnown RBP18.03■□□□□ 0.48
VEGFC-202ENST00000618562 A0A0J9YXY3 114 aa18.03■□□□□ 0.48
VEGFC-202ENST00000618562 PRO1854Q9UHT4 67 aa18.03■□□□□ 0.48
VEGFC-202ENST00000618562 TRBV10-1A0A0K0K1A3 114 aa18.02■□□□□ 0.48
VEGFC-202ENST00000618562 SHISA2Q6UWI4 295 aa18.02■□□□□ 0.48
VEGFC-202ENST00000618562 OVOL2Q9BRP0 275 aa18.02■□□□□ 0.48
VEGFC-202ENST00000618562 MAST4O15021 2626 aa18.02■□□□□ 0.48
VEGFC-202ENST00000618562 LOC107984156A0A0G2JMH3 177 aa18.02■□□□□ 0.47
VEGFC-202ENST00000618562 ARL17AQ8IVW1 177 aa18.02■□□□□ 0.47
VEGFC-202ENST00000618562 TRAV4A0A0B4J268 109 aa18■□□□□ 0.47
VEGFC-202ENST00000618562 A4D1N5 150 aa18■□□□□ 0.47
VEGFC-202ENST00000618562 VSIG2Q96IQ7 327 aa18■□□□□ 0.47
VEGFC-202ENST00000618562 C21orf62-AS1Q17RA5 79 aa18■□□□□ 0.47
VEGFC-202ENST00000618562 TRAV8-3A0A0A6YYJ7 113 aa17.99■□□□□ 0.47
VEGFC-202ENST00000618562 A0A0B4J2C4 111 aa17.99■□□□□ 0.47
VEGFC-202ENST00000618562 K7EQD1 137 aa17.99■□□□□ 0.47
VEGFC-202ENST00000618562 OXLD1Q5BKU9 147 aa17.99■□□□□ 0.47
VEGFC-202ENST00000618562 KIR2DL5BQ8NHK3 375 aa17.99■□□□□ 0.47
VEGFC-202ENST00000618562 X6R8D5 127 aa17.99■□□□□ 0.47
VEGFC-202ENST00000618562 J3QR89 54 aa17.98■□□□□ 0.47
VEGFC-202ENST00000618562 GAGE7O76087 117 aa17.98■□□□□ 0.47
VEGFC-202ENST00000618562 GAGE12FP0CL80 117 aa17.98■□□□□ 0.47
VEGFC-202ENST00000618562 GAGE12GP0CL81 117 aa17.98■□□□□ 0.47
VEGFC-202ENST00000618562 GAGE12IP0CL82 117 aa17.98■□□□□ 0.47
VEGFC-202ENST00000618562 RPL36AP83881 106 aaKnown RBP17.98■□□□□ 0.47
VEGFC-202ENST00000618562 ETDBQ3ZM63 59 aa17.98■□□□□ 0.47
VEGFC-202ENST00000618562 MUSTN1Q8IVN3 82 aa17.98■□□□□ 0.47
VEGFC-202ENST00000618562 RPL36ALQ969Q0 106 aaKnown RBP17.98■□□□□ 0.47
VEGFC-202ENST00000618562 GEMIN7Q9H840 131 aaKnown RBP17.98■□□□□ 0.47
VEGFC-202ENST00000618562 TRBV20-1A0A075B6N2 111 aa17.97■□□□□ 0.47
VEGFC-202ENST00000618562 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.97■□□□□ 0.47
VEGFC-202ENST00000618562 TIRAPP58753 221 aa17.97■□□□□ 0.47
VEGFC-202ENST00000618562 NDUFA12Q9UI09 145 aa17.97■□□□□ 0.47
VEGFC-202ENST00000618562 IGLV5-45A0A087WSX0 123 aa17.96■□□□□ 0.47
VEGFC-202ENST00000618562 PSMB2P49721 201 aa17.96■□□□□ 0.47
VEGFC-202ENST00000618562 DGAT2L7PQ6IED9 249 aa17.96■□□□□ 0.47
VEGFC-202ENST00000618562 LITAFQ99732 161 aa17.96■□□□□ 0.47
VEGFC-202ENST00000618562 DAZ4Q86SG3 579 aaKnown RBP17.95■□□□□ 0.46
VEGFC-202ENST00000618562 DAZ3Q9NR90 486 aaKnown RBP17.95■□□□□ 0.46
VEGFC-202ENST00000618562 NBEAL2Q6ZNJ1 2754 aa17.95■□□□□ 0.46
VEGFC-202ENST00000618562 APOC4P55056 127 aa17.95■□□□□ 0.46
VEGFC-202ENST00000618562 SFTA2Q6UW10 78 aa17.95■□□□□ 0.46
VEGFC-202ENST00000618562 SH2D6Q7Z4S9 175 aa17.95■□□□□ 0.46
VEGFC-202ENST00000618562 MTURNQ8N3F0 131 aa17.95■□□□□ 0.46
VEGFC-202ENST00000618562 TRGV2A0A075B6R0 118 aa17.94■□□□□ 0.46
VEGFC-202ENST00000618562 SPINK8P0C7L1 97 aa17.94■□□□□ 0.46
VEGFC-202ENST00000618562 DEFB135Q30KP9 77 aa17.94■□□□□ 0.46
VEGFC-202ENST00000618562 ZFAND6Q6FIF0 208 aa17.94■□□□□ 0.46
VEGFC-202ENST00000618562 SPANXDQ9BXN6 97 aa17.94■□□□□ 0.46
VEGFC-202ENST00000618562 SPANXCQ9NY87 97 aa17.94■□□□□ 0.46
VEGFC-202ENST00000618562 CSDC2Q9Y534 153 aaKnown RBP17.94■□□□□ 0.46
VEGFC-202ENST00000618562 IGHV3-33P01772 117 aa17.93■□□□□ 0.46
VEGFC-202ENST00000618562 IGHV4-30-4P0DP06 118 aa17.93■□□□□ 0.46
VEGFC-202ENST00000618562 SMIM9A6NGZ8 99 aa17.92■□□□□ 0.46
VEGFC-202ENST00000618562 EIF4EBP3O60516 100 aaPredicted RBP17.92■□□□□ 0.46
VEGFC-202ENST00000618562 PKD1L1Q8TDX9 2849 aa17.92■□□□□ 0.46
VEGFC-202ENST00000618562 KRTAP10-11P60412 298 aa17.92■□□□□ 0.46
VEGFC-202ENST00000618562 ATP6V0E2Q8NHE4 81 aa17.92■□□□□ 0.46
VEGFC-202ENST00000618562 COL6A5A8TX70 2615 aa17.91■□□□□ 0.46
VEGFC-202ENST00000618562 TCL1BO95988 128 aa17.91■□□□□ 0.46
VEGFC-202ENST00000618562 SMAGPQ0VAQ4 97 aa17.91■□□□□ 0.46
VEGFC-202ENST00000618562 FAM19A3Q7Z5A8 133 aa17.91■□□□□ 0.46
VEGFC-202ENST00000618562 CDKN2A-AS1Q9UH64 79 aa17.91■□□□□ 0.46
VEGFC-202ENST00000618562 ERG28Q9UKR5 140 aa17.9■□□□□ 0.46
VEGFC-202ENST00000618562 CIDEAO60543 219 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms