RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 PSPHP1O15172 72 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 EBI3Q14213 229 aa4.49□□□□□ -1.69
RFX3-212ENST00000617270 LOC100131303A0A0U1RQF7 123 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 LINC00694P0DN24 101 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 A6NDX4 124 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 M0R378 163 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 PROK1P58294 105 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 MAPKAPK5-AS1Q8N8E1 139 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 BBC3Q96PG8 261 aaPredicted RBP4.48□□□□□ -1.69
RFX3-212ENST00000617270 C2CD3Q4AC94 2353 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 IGLV1-47P01700 117 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 A0A1B0GXF2 115 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 ODF3L1Q8IXM7 274 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 HELZP42694 1942 aaKnown RBP4.48□□□□□ -1.69
RFX3-212ENST00000617270 TICRRQ7Z2Z1 1910 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 SMIM9A6NGZ8 99 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 COX7CP15954 63 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 GDF5OSQ5U4N7 250 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 BEAN1Q3B7T3 259 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 RLFQ13129 1914 aa4.48□□□□□ -1.69
RFX3-212ENST00000617270 ARHGAP21Q5T5U3 1957 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 LINC00208Q96KT6 92 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 ANKHD1Q8IWZ3 2542 aaKnown RBP4.47□□□□□ -1.69
RFX3-212ENST00000617270 M0QXV9 152 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 ANK1P16157 1881 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 PCOTHQ58A44 107 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 LOC107984640A0A0U1RRK4 108 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 DAZAP2Q15038 168 aaPredicted RBP4.47□□□□□ -1.69
RFX3-212ENST00000617270 CIRBP-AS1Q8TBR5 109 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 M0QY20 66 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 IGLV2-14P01704 120 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 RBX1P62877 108 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 NAV3Q8IVL0 2385 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 MUC6Q6W4X9 2439 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 TRAV10A0A0B4J240 114 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 WDR81Q562E7 1941 aa4.47□□□□□ -1.69
RFX3-212ENST00000617270 INAFM1C9JVW0 142 aa4.46□□□□□ -1.69
RFX3-212ENST00000617270 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.69
RFX3-212ENST00000617270 PLA2G5P39877 138 aa4.46□□□□□ -1.69
RFX3-212ENST00000617270 HIVEP3Q5T1R4 2406 aa4.46□□□□□ -1.69
RFX3-212ENST00000617270 DEFB114Q30KQ6 69 aa4.46□□□□□ -1.69
RFX3-212ENST00000617270 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
RFX3-212ENST00000617270 PIP4P1Q86T03 277 aa4.46□□□□□ -1.7
RFX3-212ENST00000617270 PLXND1Q9Y4D7 1925 aa4.46□□□□□ -1.7
RFX3-212ENST00000617270 ODF3Q96PU9 254 aa4.46□□□□□ -1.7
RFX3-212ENST00000617270 CLUHP3Q96NS8 147 aa4.46□□□□□ -1.7
RFX3-212ENST00000617270 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
RFX3-212ENST00000617270 XGP55808 180 aa4.46□□□□□ -1.7
RFX3-212ENST00000617270 SMIM11BQ8TCY0 68 aa4.46□□□□□ -1.7
RFX3-212ENST00000617270 LST1O00453 97 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 PRR14LQ5THK1 2151 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 IGLV4-69A0A075B6H9 119 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 A0A087WVE0 104 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 K7EQG2 157 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 IGLV2-8P01709 118 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 TRBV6-4A0A1B0GX49 114 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 KPRPQ5T749 579 aaPredicted RBP4.45□□□□□ -1.7
RFX3-212ENST00000617270 LRRC75A-AS1Q8N1F1 130 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 KRTAP27-1Q3LI81 207 aa4.45□□□□□ -1.7
RFX3-212ENST00000617270 IMUPQ9GZP8 106 aa4.44□□□□□ -1.7
RFX3-212ENST00000617270 KIAA1671Q9BY89 1806 aa4.44□□□□□ -1.7
RFX3-212ENST00000617270 Q6JHZ5 121 aa4.44□□□□□ -1.7
RFX3-212ENST00000617270 CRYGAP11844 174 aa4.44□□□□□ -1.7
RFX3-212ENST00000617270 C10orf99Q6UWK7 81 aa4.44□□□□□ -1.7
RFX3-212ENST00000617270 ODF3BA8MYP8 253 aa4.44□□□□□ -1.7
RFX3-212ENST00000617270 MRPS36P82909 103 aaKnown RBP4.44□□□□□ -1.7
RFX3-212ENST00000617270 LINC01547P58512 204 aaPredicted RBP4.44□□□□□ -1.7
RFX3-212ENST00000617270 CSDC2Q9Y534 153 aaKnown RBP4.44□□□□□ -1.7
RFX3-212ENST00000617270 TNFRSF13BO14836 293 aaPredicted RBP4.43□□□□□ -1.7
RFX3-212ENST00000617270 LINC00474Q9P2X8 69 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 FRMPD3Q5JV73 1810 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 TSHBP01222 138 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 MED12LQ86YW9 2145 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 C1orf137Q5JT78 98 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 NTM-AS1Q6ZSK4 140 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 MBD6Q96DN6 1003 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 PYGO1Q9Y3Y4 419 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 LINC00959A0A1B0GUT2 108 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
RFX3-212ENST00000617270 Q6YL49 198 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 VWA8A3KMH1 1905 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 SERTAD4-AS1Q5TG53 156 aa4.43□□□□□ -1.7
RFX3-212ENST00000617270 SBF1O95248 1867 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 RPL28P46779 137 aaKnown RBP4.42□□□□□ -1.7
RFX3-212ENST00000617270 ZNF843Q8N446 348 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 SHISA2Q6UWI4 295 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 GREB1LQ9C091 1923 aaPredicted RBP4.42□□□□□ -1.7
RFX3-212ENST00000617270 SIPA1L1O43166 1804 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 CYSRT1A8MQ03 144 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 IGFL2Q6UWQ7 119 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 Q6ZS46 218 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 RNF185Q96GF1 192 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 PRM2P04554 102 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 MSMPQ1L6U9 139 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 PLXNA4Q9HCM2 1894 aa4.42□□□□□ -1.7
RFX3-212ENST00000617270 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
RFX3-212ENST00000617270 LELP1Q5T871 98 aa4.41□□□□□ -1.7
RFX3-212ENST00000617270 SBSPONQ8IVN8 264 aa4.41□□□□□ -1.7
RFX3-212ENST00000617270 Q6ZSR3 168 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms