RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CRIP2P52943 208 aaPredicted RBP10.35□□□□□ -0.75
CHD1-212ENST00000614616 COX17Q14061 63 aa10.34□□□□□ -0.75
CHD1-212ENST00000614616 PSPHP1O15172 72 aa10.34□□□□□ -0.75
CHD1-212ENST00000614616 GPHB5Q86YW7 130 aa10.33□□□□□ -0.76
CHD1-212ENST00000614616 Q8N9W7 124 aa10.33□□□□□ -0.76
CHD1-212ENST00000614616 APRG1Q8IVJ8 170 aa10.33□□□□□ -0.76
CHD1-212ENST00000614616 LINC00574Q9H8X3 128 aa10.33□□□□□ -0.76
CHD1-212ENST00000614616 C3orf84H3BNL1 204 aa10.33□□□□□ -0.76
CHD1-212ENST00000614616 C22orf34Q6ZV56 151 aa10.32□□□□□ -0.76
CHD1-212ENST00000614616 COL4A4P53420 1690 aaPredicted RBP10.32□□□□□ -0.76
CHD1-212ENST00000614616 ANKHD1Q8IWZ3 2542 aaKnown RBP10.32□□□□□ -0.76
CHD1-212ENST00000614616 C2CD3Q4AC94 2353 aa10.32□□□□□ -0.76
CHD1-212ENST00000614616 BRWD1-AS2P59051 145 aa10.32□□□□□ -0.76
CHD1-212ENST00000614616 WFDC10AQ9H1F0 79 aa10.31□□□□□ -0.76
CHD1-212ENST00000614616 URB1-AS1Q96HZ7 61 aa10.31□□□□□ -0.76
CHD1-212ENST00000614616 DKK4Q9UBT3 224 aa10.31□□□□□ -0.76
CHD1-212ENST00000614616 CRIP3Q6Q6R5 217 aa10.31□□□□□ -0.76
CHD1-212ENST00000614616 LRCOL1A6NCL2 159 aa10.3□□□□□ -0.76
CHD1-212ENST00000614616 CCL24O00175 119 aa10.3□□□□□ -0.76
CHD1-212ENST00000614616 K7ENP7 123 aa10.29□□□□□ -0.76
CHD1-212ENST00000614616 SIRPDQ9H106 197 aa10.29□□□□□ -0.76
CHD1-212ENST00000614616 CGB3P0DN86 165 aa10.29□□□□□ -0.76
CHD1-212ENST00000614616 RPL28P46779 137 aaKnown RBP10.29□□□□□ -0.76
CHD1-212ENST00000614616 TSHBP01222 138 aa10.28□□□□□ -0.76
CHD1-212ENST00000614616 ESRGQ1W209 222 aa10.28□□□□□ -0.76
CHD1-212ENST00000614616 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
CHD1-212ENST00000614616 C6orf99Q4VX62 202 aa10.27□□□□□ -0.76
CHD1-212ENST00000614616 IGFL3Q6UXB1 125 aa10.27□□□□□ -0.76
CHD1-212ENST00000614616 DEFB112Q30KQ8 113 aa10.27□□□□□ -0.77
CHD1-212ENST00000614616 C1orf158Q8N1D5 194 aa10.27□□□□□ -0.77
CHD1-212ENST00000614616 IGLV1-47P01700 117 aa10.27□□□□□ -0.77
CHD1-212ENST00000614616 LIMD2Q9BT23 127 aa10.27□□□□□ -0.77
CHD1-212ENST00000614616 SLURP1P55000 103 aa10.27□□□□□ -0.77
CHD1-212ENST00000614616 C9orf85Q96MD7 179 aa10.27□□□□□ -0.77
CHD1-212ENST00000614616 IGIPA6NJ69 53 aa10.25□□□□□ -0.77
CHD1-212ENST00000614616 Q8N814 137 aa10.25□□□□□ -0.77
CHD1-212ENST00000614616 A0A087WVE0 104 aa10.25□□□□□ -0.77
CHD1-212ENST00000614616 CXCL6P80162 114 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 B9D2Q9BPU9 175 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 PRR4Q16378 134 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 CGB7P0DN87 165 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 DEFB136Q30KP8 78 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 IGLV4-69A0A075B6H9 119 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
CHD1-212ENST00000614616 UBE2D4Q9Y2X8 147 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 Q8N9L7 120 aa10.24□□□□□ -0.77
CHD1-212ENST00000614616 UNQ9165/PRO28630Q6UXU0 137 aa10.23□□□□□ -0.77
CHD1-212ENST00000614616 Q8N3U1 123 aa10.23□□□□□ -0.77
CHD1-212ENST00000614616 IGHV4-59P01825 116 aa10.23□□□□□ -0.77
CHD1-212ENST00000614616 DEFB1P60022 68 aa10.23□□□□□ -0.77
CHD1-212ENST00000614616 NTM-AS1Q6ZSK4 140 aa10.23□□□□□ -0.77
CHD1-212ENST00000614616 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
CHD1-212ENST00000614616 PLAC8L1A1L4L8 177 aa10.22□□□□□ -0.77
CHD1-212ENST00000614616 LY6G6EA0A0G2JKS1 128 aa10.22□□□□□ -0.77
CHD1-212ENST00000614616 A0A0J9YWU9 116 aa10.22□□□□□ -0.77
CHD1-212ENST00000614616 TMEM89A2RUT3 159 aa10.22□□□□□ -0.77
CHD1-212ENST00000614616 MUC7Q8TAX7 377 aa10.22□□□□□ -0.77
CHD1-212ENST00000614616 U3KQA8 63 aa10.22□□□□□ -0.77
CHD1-212ENST00000614616 SMAD5-AS1Q9Y6J3 95 aa10.22□□□□□ -0.77
CHD1-212ENST00000614616 Q8N7P7 452 aa10.22□□□□□ -0.77
CHD1-212ENST00000614616 POLR2KP53803 58 aaKnown RBP10.21□□□□□ -0.77
CHD1-212ENST00000614616 REG3AQ06141 175 aa10.21□□□□□ -0.78
CHD1-212ENST00000614616 KLK12Q9UKR0 248 aa10.21□□□□□ -0.78
CHD1-212ENST00000614616 DHRS4-AS1Q9P1J3 65 aa10.21□□□□□ -0.78
CHD1-212ENST00000614616 CCDC140Q96MF4 163 aa10.21□□□□□ -0.78
CHD1-212ENST00000614616 TMEM254Q8TBM7 123 aa10.2□□□□□ -0.78
CHD1-212ENST00000614616 POM121L12Q8N7R1 296 aa10.2□□□□□ -0.78
CHD1-212ENST00000614616 TRBV10-3A0A0K0K1G6 114 aa10.2□□□□□ -0.78
CHD1-212ENST00000614616 Q6ZQY7 126 aa10.2□□□□□ -0.78
CHD1-212ENST00000614616 A0A087WYN8 130 aa10.19□□□□□ -0.78
CHD1-212ENST00000614616 C4orf3Q8WVX3 66 aa10.19□□□□□ -0.78
CHD1-212ENST00000614616 FAM215AQ9Y5M1 114 aa10.19□□□□□ -0.78
CHD1-212ENST00000614616 RNASE3P12724 160 aaKnown RBP10.19□□□□□ -0.78
CHD1-212ENST00000614616 CHCHD10Q8WYQ3 142 aaPredicted RBP10.19□□□□□ -0.78
CHD1-212ENST00000614616 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
CHD1-212ENST00000614616 BCE1O60756 84 aa10.18□□□□□ -0.78
CHD1-212ENST00000614616 PRO0255Q9UI72 69 aa10.18□□□□□ -0.78
CHD1-212ENST00000614616 TRBV6-8A0A0A6YYG3 113 aa10.17□□□□□ -0.78
CHD1-212ENST00000614616 Q8N6K4 173 aa10.17□□□□□ -0.78
CHD1-212ENST00000614616 LINC01546A6NGU7 62 aa10.17□□□□□ -0.78
CHD1-212ENST00000614616 PRO0461Q9UI25 63 aa10.17□□□□□ -0.78
CHD1-212ENST00000614616 CELA1Q9UNI1 258 aa10.17□□□□□ -0.78
CHD1-212ENST00000614616 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
CHD1-212ENST00000614616 DEFB121Q5J5C9 76 aa10.16□□□□□ -0.78
CHD1-212ENST00000614616 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
CHD1-212ENST00000614616 C4orf48Q5BLP8 95 aa10.15□□□□□ -0.78
CHD1-212ENST00000614616 DCANP1Q8TF63 244 aa10.15□□□□□ -0.78
CHD1-212ENST00000614616 RNF223E7ERA6 249 aa10.15□□□□□ -0.78
CHD1-212ENST00000614616 FAM19A1Q7Z5A9 133 aa10.15□□□□□ -0.78
CHD1-212ENST00000614616 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
CHD1-212ENST00000614616 F8WDY8 70 aa10.15□□□□□ -0.79
CHD1-212ENST00000614616 WFDC13Q8IUB5 93 aa10.15□□□□□ -0.79
CHD1-212ENST00000614616 MAP6D1Q9H9H5 199 aa10.14□□□□□ -0.79
CHD1-212ENST00000614616 A0A096LNJ9 63 aa10.14□□□□□ -0.79
CHD1-212ENST00000614616 IGF1P05019 195 aa10.14□□□□□ -0.79
CHD1-212ENST00000614616 C1orf229Q6ZS94 237 aaPredicted RBP10.14□□□□□ -0.79
CHD1-212ENST00000614616 KIR2DL5BQ8NHK3 375 aa10.14□□□□□ -0.79
CHD1-212ENST00000614616 hDV103S1A0JD37 113 aa10.13□□□□□ -0.79
CHD1-212ENST00000614616 LINC01547P58512 204 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms