RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CHCHD5Q9BSY4 110 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 UBE2D4Q9Y2X8 147 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 UBE2L6O14933 153 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 SPINK8P0C7L1 97 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 PTTG1IPP53801 180 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 UBE2D3P61077 147 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 DAD1P61803 113 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 UBE2D2P62837 147 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 LINC00469Q8N7U9 141 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 A0A0U1RRA0 63 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 K7ERJ3 54 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 FXYD2P54710 66 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 COX6A2Q02221 97 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 SHISA2Q6UWI4 295 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 Q8N3U1 123 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 PTH2Q96A98 100 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 DNAJC30Q96LL9 226 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 HIST1H4GQ99525 98 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 TRAV26-1A0A087WT03 109 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 PAX4O43316 350 aa2.42□□□□□ -2.02
LIG4-205ENST00000614526 ZNF22P17026 224 aaPredicted RBP2.42□□□□□ -2.02
LIG4-205ENST00000614526 ZNF625Q96I27 306 aaPredicted RBP2.42□□□□□ -2.02
LIG4-205ENST00000614526 GEMIN7Q9H840 131 aaKnown RBP2.42□□□□□ -2.02
LIG4-205ENST00000614526 IGLV4-60A0A075B6I1 120 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 TRBV10-1A0A0K0K1A3 114 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 MYMXA0A1B0GTQ4 84 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 TRBV6-4A0A1B0GX49 114 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 E9PLD3 99 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 HERVK_113P61574 105 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 NPC2P61916 151 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 SRSF9Q13242 221 aaKnown RBP eCLIP2.41□□□□□ -2.02
LIG4-205ENST00000614526 SFTA2Q6UW10 78 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 DAZ4Q86SG3 579 aaKnown RBP2.41□□□□□ -2.02
LIG4-205ENST00000614526 Q8NAQ8 132 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 MDFIQ99750 246 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 TMEM243Q9BU79 118 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 DAZ3Q9NR90 486 aaKnown RBP2.41□□□□□ -2.02
LIG4-205ENST00000614526 NHP2Q9NX24 153 aaKnown RBP2.41□□□□□ -2.02
LIG4-205ENST00000614526 CDKN2A-AS1Q9UH64 79 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 J3QQQ9 107 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 LGALS3P17931 250 aaKnown RBP2.41□□□□□ -2.02
LIG4-205ENST00000614526 CRYBA4P53673 196 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 LBHQ53QV2 105 aaPredicted RBP2.41□□□□□ -2.02
LIG4-205ENST00000614526 OR5A1Q8NGJ0 315 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 ATP6V0E2Q8NHE4 81 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 KIR2DL5BQ8NHK3 375 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 ORAOV1Q8WV07 137 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 EDA2RQ9HAV5 297 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 TAX1BP3O14907 124 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 NPSP0C0P6 89 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 VAMP3Q15836 100 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 PAPPA-AS1Q5QFB9 102 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 RNF183Q96D59 192 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 VSIG2Q96IQ7 327 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 AMELXQ99217 191 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 SPANXA1Q9NS26 97 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 PYGO1Q9Y3Y4 419 aa2.41□□□□□ -2.02
LIG4-205ENST00000614526 TRBV6-8A0A0A6YYG3 113 aa2.4□□□□□ -2.02
LIG4-205ENST00000614526 TMEM223A0PJW6 202 aa2.4□□□□□ -2.02
LIG4-205ENST00000614526 SMIM9A6NGZ8 99 aa2.4□□□□□ -2.02
LIG4-205ENST00000614526 H3BUT2 72 aa2.4□□□□□ -2.02
LIG4-205ENST00000614526 SPART-AS1P0CW21 52 aa2.4□□□□□ -2.02
LIG4-205ENST00000614526 IGHV3-30-3P0DP02 117 aa2.4□□□□□ -2.02
LIG4-205ENST00000614526 HSD52Q0P140 79 aa2.4□□□□□ -2.02
LIG4-205ENST00000614526 TIMM21Q9BVV7 248 aa2.4□□□□□ -2.02
LIG4-205ENST00000614526 CMYA5Q8N3K9 4069 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 LINC01549A6NIU2 74 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 ATP5G1P05496 136 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 PRSS2P07478 247 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 SBSPONQ8IVN8 264 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 DAND5Q8N907 189 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 TMEM101Q96IK0 257 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 C11orf68Q9H3H3 251 aaKnown RBP2.4□□□□□ -2.03
LIG4-205ENST00000614526 CDC42SE2Q9NRR3 84 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 TOMM7Q9P0U1 55 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 A0A0J9YWU9 116 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 LYRM9A8MSI8 78 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 DLEU1O43261 78 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 APOMO95445 188 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 MIFP14174 115 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 UBE2D1P51668 147 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 MRPS36P82909 103 aaKnown RBP2.4□□□□□ -2.03
LIG4-205ENST00000614526 LINC00242Q5T6M2 205 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 Q6ZTC4 211 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 C5orf38Q86SI9 138 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 NFE4Q86UQ8 179 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 COX11Q9Y6N1 276 aa2.4□□□□□ -2.03
LIG4-205ENST00000614526 SIVA1O15304 175 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 XCL1P47992 114 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 NANOS2P60321 138 aaKnown RBP2.39□□□□□ -2.03
LIG4-205ENST00000614526 CEND1Q8N111 149 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 A6NDN8 102 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 H7C2G1 150 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 C12orf74Q32Q52 190 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 C10orf126Q8N4M7 172 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 LINC00612Q8N6U2 182 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 TINCRA0A1B0GVN0 87 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 LEPROTO15243 131 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms