RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 UBE2D4Q9Y2X8 147 aa7.86□□□□□ -1.15
SLIRP-212ENST00000613856 CSDC2Q9Y534 153 aaKnown RBP7.86□□□□□ -1.15
SLIRP-212ENST00000613856 FAT2Q9NYQ8 4349 aa7.85□□□□□ -1.15
SLIRP-212ENST00000613856 IGLL5B9A064 214 aa7.85□□□□□ -1.15
SLIRP-212ENST00000613856 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.85□□□□□ -1.15
SLIRP-212ENST00000613856 UBE2L6O14933 153 aa7.85□□□□□ -1.15
SLIRP-212ENST00000613856 ZNF25P17030 456 aaPredicted RBP7.85□□□□□ -1.15
SLIRP-212ENST00000613856 TCTAP57738 103 aa7.85□□□□□ -1.15
SLIRP-212ENST00000613856 PKIAP61925 76 aa7.85□□□□□ -1.15
SLIRP-212ENST00000613856 DNAH2Q9P225 4427 aa7.85□□□□□ -1.15
SLIRP-212ENST00000613856 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
SLIRP-212ENST00000613856 FGF6P10767 208 aa7.84□□□□□ -1.15
SLIRP-212ENST00000613856 MRPS36P82909 103 aaKnown RBP7.84□□□□□ -1.15
SLIRP-212ENST00000613856 SPATA12Q7Z6I5 190 aa7.84□□□□□ -1.15
SLIRP-212ENST00000613856 CHCHD5Q9BSY4 110 aa7.84□□□□□ -1.15
SLIRP-212ENST00000613856 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
SLIRP-212ENST00000613856 KLK5Q9Y337 293 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-212ENST00000613856 DNAH6Q9C0G6 4158 aa7.84□□□□□ -1.15
SLIRP-212ENST00000613856 DYNC1H1Q14204 4646 aaKnown RBP7.83□□□□□ -1.16
SLIRP-212ENST00000613856 IGLV4-3A0A075B6K6 122 aa7.83□□□□□ -1.16
SLIRP-212ENST00000613856 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
SLIRP-212ENST00000613856 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
SLIRP-212ENST00000613856 TRAV12-1A0A0B4J245 112 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 TRAV8-6A0A0B4J262 113 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 A0A1B0GVY2 172 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 SYS1-DBNDD2H3BUS1 97 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 KRTDAPP60985 99 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 GAGE6Q13070 117 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 ESRGQ1W209 222 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 AMMECR1LQ6DCA0 310 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 PET117Q6UWS5 81 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 Q6ZN92 141 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 BAALCQ8WXS3 180 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 FAM104AQ969W3 186 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 APLNQ9ULZ1 77 aa7.82□□□□□ -1.16
SLIRP-212ENST00000613856 AKR1D1P51857 326 aa7.81□□□□□ -1.16
SLIRP-212ENST00000613856 DGAT2L7PQ6IED9 249 aa7.81□□□□□ -1.16
SLIRP-212ENST00000613856 Q6ZUT4 128 aa7.81□□□□□ -1.16
SLIRP-212ENST00000613856 OR5A1Q8NGJ0 315 aa7.81□□□□□ -1.16
SLIRP-212ENST00000613856 TMEM101Q96IK0 257 aa7.81□□□□□ -1.16
SLIRP-212ENST00000613856 AMELXQ99217 191 aa7.81□□□□□ -1.16
SLIRP-212ENST00000613856 MRPS16Q9Y3D3 137 aaKnown RBP7.81□□□□□ -1.16
SLIRP-212ENST00000613856 C20orf202A1L168 122 aa7.8□□□□□ -1.16
SLIRP-212ENST00000613856 CCL18P55774 89 aa7.8□□□□□ -1.16
SLIRP-212ENST00000613856 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
SLIRP-212ENST00000613856 PMVKQ15126 192 aa7.8□□□□□ -1.16
SLIRP-212ENST00000613856 MPV17L2Q567V2 206 aa7.8□□□□□ -1.16
SLIRP-212ENST00000613856 LINC01545Q5VT33 79 aa7.8□□□□□ -1.16
SLIRP-212ENST00000613856 Q8N976 141 aa7.8□□□□□ -1.16
SLIRP-212ENST00000613856 UPK3BQ9BT76 320 aa7.8□□□□□ -1.16
SLIRP-212ENST00000613856 CDC42SE2Q9NRR3 84 aa7.8□□□□□ -1.16
SLIRP-212ENST00000613856 A0A087WX48 190 aa7.79□□□□□ -1.16
SLIRP-212ENST00000613856 PRSS1P07477 247 aa7.79□□□□□ -1.16
SLIRP-212ENST00000613856 RBX1P62877 108 aa7.79□□□□□ -1.16
SLIRP-212ENST00000613856 ODF1Q14990 250 aa7.79□□□□□ -1.16
SLIRP-212ENST00000613856 TEX43Q6ZNM6 134 aa7.79□□□□□ -1.16
SLIRP-212ENST00000613856 OPRPNQ99935 248 aaPredicted RBP7.79□□□□□ -1.16
SLIRP-212ENST00000613856 VCX2Q9H322 139 aa7.79□□□□□ -1.16
SLIRP-212ENST00000613856 LINC00588Q9Y4M8 146 aa7.79□□□□□ -1.16
SLIRP-212ENST00000613856 IGLV4-60A0A075B6I1 120 aa7.78□□□□□ -1.16
SLIRP-212ENST00000613856 PRSS29PA6NIE9 313 aa7.78□□□□□ -1.16
SLIRP-212ENST00000613856 TMEM262E9PQX1 116 aa7.78□□□□□ -1.16
SLIRP-212ENST00000613856 WFDC10BQ8IUB3 73 aa7.78□□□□□ -1.16
SLIRP-212ENST00000613856 ZNF664Q8N3J9 261 aa7.78□□□□□ -1.16
SLIRP-212ENST00000613856 C2orf88Q9BSF0 95 aa7.78□□□□□ -1.16
SLIRP-212ENST00000613856 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
SLIRP-212ENST00000613856 F8VRH5 84 aa7.77□□□□□ -1.17
SLIRP-212ENST00000613856 H0Y8G0 127 aa7.77□□□□□ -1.17
SLIRP-212ENST00000613856 DNAH10OSP0CZ25 163 aa7.77□□□□□ -1.17
SLIRP-212ENST00000613856 SMIM6P0DI80 62 aa7.77□□□□□ -1.17
SLIRP-212ENST00000613856 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
SLIRP-212ENST00000613856 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.17
SLIRP-212ENST00000613856 DNAH11Q96DT5 4516 aa7.77□□□□□ -1.17
SLIRP-212ENST00000613856 PKD1P98161 4303 aa7.76□□□□□ -1.17
SLIRP-212ENST00000613856 DNAH17Q9UFH2 4485 aa7.76□□□□□ -1.17
SLIRP-212ENST00000613856 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
SLIRP-212ENST00000613856 FAM19A3Q7Z5A8 133 aa7.76□□□□□ -1.17
SLIRP-212ENST00000613856 CHTOPQ9Y3Y2 248 aaKnown RBP7.76□□□□□ -1.17
SLIRP-212ENST00000613856 HSPG2P98160 4391 aa7.76□□□□□ -1.17
SLIRP-212ENST00000613856 IGLV4-69A0A075B6H9 119 aa7.75□□□□□ -1.17
SLIRP-212ENST00000613856 IGLC3P0DOY3 106 aa7.75□□□□□ -1.17
SLIRP-212ENST00000613856 PLNP26678 52 aa7.75□□□□□ -1.17
SLIRP-212ENST00000613856 UBE2D1P51668 147 aa7.75□□□□□ -1.17
SLIRP-212ENST00000613856 RNASE13Q5GAN3 156 aaKnown RBP7.75□□□□□ -1.17
SLIRP-212ENST00000613856 ZC2HC1BQ5TFG8 222 aa7.75□□□□□ -1.17
SLIRP-212ENST00000613856 NFE4Q86UQ8 179 aa7.75□□□□□ -1.17
SLIRP-212ENST00000613856 Q8N3U1 123 aa7.75□□□□□ -1.17
SLIRP-212ENST00000613856 MRPL35Q9NZE8 188 aaKnown RBP7.75□□□□□ -1.17
SLIRP-212ENST00000613856 SIVA1O15304 175 aa7.74□□□□□ -1.17
SLIRP-212ENST00000613856 DPM2O94777 84 aa7.74□□□□□ -1.17
SLIRP-212ENST00000613856 ANGP03950 147 aaKnown RBP7.74□□□□□ -1.17
SLIRP-212ENST00000613856 PRR34Q9NV39 138 aa7.74□□□□□ -1.17
SLIRP-212ENST00000613856 TINCRA0A1B0GVN0 87 aa7.73□□□□□ -1.17
SLIRP-212ENST00000613856 K7EP13 123 aa7.73□□□□□ -1.17
SLIRP-212ENST00000613856 CCL25O15444 150 aa7.73□□□□□ -1.17
SLIRP-212ENST00000613856 IGKCP01834 107 aa7.73□□□□□ -1.17
SLIRP-212ENST00000613856 SEC11AP67812 179 aa7.73□□□□□ -1.17
SLIRP-212ENST00000613856 UBE2DNLQ8IWF7 75 aa7.73□□□□□ -1.17
SLIRP-212ENST00000613856 PMCHL2Q9BQD1 86 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms