RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 EMP1P54849 157 aa12.78□□□□□ -0.36
SEMA6C-209ENST00000613223 TRGV2A0A075B6R0 118 aa12.78□□□□□ -0.36
SEMA6C-209ENST00000613223 ZNRF2Q8NHG8 242 aa12.78□□□□□ -0.36
SEMA6C-209ENST00000613223 IGHV3-38A0A0C4DH36 116 aa12.77□□□□□ -0.37
SEMA6C-209ENST00000613223 TSPAN13O95857 204 aa12.77□□□□□ -0.37
SEMA6C-209ENST00000613223 RPL36AP83881 106 aaKnown RBP12.77□□□□□ -0.37
SEMA6C-209ENST00000613223 TMEM170BQ5T4T1 132 aa12.77□□□□□ -0.37
SEMA6C-209ENST00000613223 NFE4Q86UQ8 179 aa12.77□□□□□ -0.37
SEMA6C-209ENST00000613223 RPL36ALQ969Q0 106 aaKnown RBP12.77□□□□□ -0.37
SEMA6C-209ENST00000613223 SLC25A29Q8N8R3 303 aa12.76□□□□□ -0.37
SEMA6C-209ENST00000613223 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
SEMA6C-209ENST00000613223 VCX2Q9H322 139 aa12.76□□□□□ -0.37
SEMA6C-209ENST00000613223 GAGE12HA6NDE8 117 aa12.76□□□□□ -0.37
SEMA6C-209ENST00000613223 CRYBA4P53673 196 aa12.76□□□□□ -0.37
SEMA6C-209ENST00000613223 TSPEAR-AS2P59090 65 aa12.76□□□□□ -0.37
SEMA6C-209ENST00000613223 SPANXA1Q9NS26 97 aa12.76□□□□□ -0.37
SEMA6C-209ENST00000613223 WIPF1O43516 503 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 IGHV3-30P01768 117 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 IGHV3-30-5P0DP03 117 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 SCGB1A1P11684 91 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 UBE2D3P61077 147 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 UBE2D2P62837 147 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 LYRM7Q5U5X0 104 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 AMELXQ99217 191 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
SEMA6C-209ENST00000613223 ATP6V0E2Q8NHE4 81 aa12.74□□□□□ -0.37
SEMA6C-209ENST00000613223 UBE2D4Q9Y2X8 147 aa12.74□□□□□ -0.37
SEMA6C-209ENST00000613223 J3QQQ9 107 aa12.74□□□□□ -0.37
SEMA6C-209ENST00000613223 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
SEMA6C-209ENST00000613223 MTURNQ8N3F0 131 aa12.74□□□□□ -0.37
SEMA6C-209ENST00000613223 KIR2DL5BQ8NHK3 375 aa12.74□□□□□ -0.37
SEMA6C-209ENST00000613223 FAM104AQ969W3 186 aa12.74□□□□□ -0.37
SEMA6C-209ENST00000613223 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
SEMA6C-209ENST00000613223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.73□□□□□ -0.37
SEMA6C-209ENST00000613223 IGKV2-29A2NJV5 120 aaPredicted RBP12.73□□□□□ -0.37
SEMA6C-209ENST00000613223 SMIM9A6NGZ8 99 aa12.73□□□□□ -0.37
SEMA6C-209ENST00000613223 APOMO95445 188 aa12.73□□□□□ -0.37
SEMA6C-209ENST00000613223 LGALS3P17931 250 aaKnown RBP12.73□□□□□ -0.37
SEMA6C-209ENST00000613223 X6R8D5 127 aa12.73□□□□□ -0.37
SEMA6C-209ENST00000613223 TRBV6-4A0A1B0GX49 114 aa12.72□□□□□ -0.37
SEMA6C-209ENST00000613223 LEPROTO15243 131 aa12.72□□□□□ -0.37
SEMA6C-209ENST00000613223 LOC107984156A0A0G2JMH3 177 aa12.72□□□□□ -0.37
SEMA6C-209ENST00000613223 TMEM223A0PJW6 202 aa12.72□□□□□ -0.37
SEMA6C-209ENST00000613223 APOC4P55056 127 aa12.72□□□□□ -0.37
SEMA6C-209ENST00000613223 KRTAP24-1Q3LI83 254 aa12.72□□□□□ -0.37
SEMA6C-209ENST00000613223 CEMP1Q6PRD7 247 aaPredicted RBP12.72□□□□□ -0.37
SEMA6C-209ENST00000613223 ARL17AQ8IVW1 177 aa12.72□□□□□ -0.37
SEMA6C-209ENST00000613223 CFC1BP0CG36 223 aa12.71□□□□□ -0.37
SEMA6C-209ENST00000613223 CFC1P0CG37 223 aa12.71□□□□□ -0.37
SEMA6C-209ENST00000613223 PSMB2P49721 201 aa12.71□□□□□ -0.37
SEMA6C-209ENST00000613223 LINC00612Q8N6U2 182 aa12.71□□□□□ -0.37
SEMA6C-209ENST00000613223 GTSF1LQ9H1H1 148 aa12.71□□□□□ -0.37
SEMA6C-209ENST00000613223 TRGV4A0A0C4DH28 118 aa12.7□□□□□ -0.38
SEMA6C-209ENST00000613223 GAGE12JA6NER3 117 aa12.7□□□□□ -0.38
SEMA6C-209ENST00000613223 SMCPP49901 116 aaPredicted RBP12.7□□□□□ -0.38
SEMA6C-209ENST00000613223 GAGE4Q13068 117 aa12.7□□□□□ -0.38
SEMA6C-209ENST00000613223 GAGE5Q13069 117 aa12.7□□□□□ -0.38
SEMA6C-209ENST00000613223 TIMM21Q9BVV7 248 aa12.7□□□□□ -0.38
SEMA6C-209ENST00000613223 TRBV20-1A0A075B6N2 111 aa12.69□□□□□ -0.38
SEMA6C-209ENST00000613223 C10orf126Q8N4M7 172 aa12.69□□□□□ -0.38
SEMA6C-209ENST00000613223 A0A0J9YXV3 536 aa12.69□□□□□ -0.38
SEMA6C-209ENST00000613223 FOXI1Q12951 378 aa12.69□□□□□ -0.38
SEMA6C-209ENST00000613223 FHL2Q14192 279 aa12.69□□□□□ -0.38
SEMA6C-209ENST00000613223 ZNF22P17026 224 aaPredicted RBP12.68□□□□□ -0.38
SEMA6C-209ENST00000613223 MRPS36P82909 103 aaKnown RBP12.68□□□□□ -0.38
SEMA6C-209ENST00000613223 Q6ZUT4 128 aa12.68□□□□□ -0.38
SEMA6C-209ENST00000613223 PRO1854Q9UHT4 67 aa12.67□□□□□ -0.38
SEMA6C-209ENST00000613223 DEFB130BP0DP73 79 aa12.67□□□□□ -0.38
SEMA6C-209ENST00000613223 DEFB130AP0DP74 79 aa12.67□□□□□ -0.38
SEMA6C-209ENST00000613223 DEFB135Q30KP9 77 aa12.67□□□□□ -0.38
SEMA6C-209ENST00000613223 RNASE13Q5GAN3 156 aaKnown RBP12.67□□□□□ -0.38
SEMA6C-209ENST00000613223 NTM-AS1Q6ZSK4 140 aa12.67□□□□□ -0.38
SEMA6C-209ENST00000613223 SMAGPQ0VAQ4 97 aa12.66□□□□□ -0.38
SEMA6C-209ENST00000613223 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
SEMA6C-209ENST00000613223 LOC100131303A0A0U1RQF7 123 aa12.65□□□□□ -0.38
SEMA6C-209ENST00000613223 TCL1BO95988 128 aa12.65□□□□□ -0.38
SEMA6C-209ENST00000613223 SBSPONQ8IVN8 264 aa12.65□□□□□ -0.38
SEMA6C-209ENST00000613223 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
SEMA6C-209ENST00000613223 TRRAPQ9Y4A5 3859 aa12.65□□□□□ -0.39
SEMA6C-209ENST00000613223 TINCRA0A1B0GVN0 87 aa12.63□□□□□ -0.39
SEMA6C-209ENST00000613223 LYRM9A8MSI8 78 aa12.63□□□□□ -0.39
SEMA6C-209ENST00000613223 CSDC2Q9Y534 153 aaKnown RBP12.63□□□□□ -0.39
SEMA6C-209ENST00000613223 A4D1N5 150 aa12.63□□□□□ -0.39
SEMA6C-209ENST00000613223 LINC00694P0DN24 101 aa12.63□□□□□ -0.39
SEMA6C-209ENST00000613223 IGHV4-30-4P0DP06 118 aa12.63□□□□□ -0.39
SEMA6C-209ENST00000613223 A0A0B4J2C4 111 aa12.62□□□□□ -0.39
SEMA6C-209ENST00000613223 TEN1Q86WV5 123 aa12.62□□□□□ -0.39
SEMA6C-209ENST00000613223 C3orf56Q8N813 242 aa12.62□□□□□ -0.39
SEMA6C-209ENST00000613223 PPDPFLQ8WWR9 84 aa12.62□□□□□ -0.39
SEMA6C-209ENST00000613223 TMEM243Q9BU79 118 aa12.62□□□□□ -0.39
SEMA6C-209ENST00000613223 FAM222AQ5U5X8 452 aa12.61□□□□□ -0.39
SEMA6C-209ENST00000613223 SCGB1C2P0DMR2 95 aa12.61□□□□□ -0.39
SEMA6C-209ENST00000613223 SHISA2Q6UWI4 295 aa12.61□□□□□ -0.39
SEMA6C-209ENST00000613223 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
SEMA6C-209ENST00000613223 IGHV4-28A0A0C4DH34 117 aa12.6□□□□□ -0.39
SEMA6C-209ENST00000613223 IGHV3-33P01772 117 aa12.6□□□□□ -0.39
SEMA6C-209ENST00000613223 MUSTN1Q8IVN3 82 aa12.6□□□□□ -0.39
SEMA6C-209ENST00000613223 IGHV3-64A0A075B6Q5 118 aa12.6□□□□□ -0.39
SEMA6C-209ENST00000613223 H7C423 109 aa12.6□□□□□ -0.39
SEMA6C-209ENST00000613223 EIF4EBP3O60516 100 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms