RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 RPL39LQ96EH5 51 aaKnown RBP8.87□□□□□ -0.99
MUC1-222ENST00000610468 IMMP2LQ96T52 175 aa8.87□□□□□ -0.99
MUC1-222ENST00000610468 NIT2Q9NQR4 276 aa8.87□□□□□ -0.99
MUC1-222ENST00000610468 IGLV10-54A0A075B6I4 117 aa8.86□□□□□ -0.99
MUC1-222ENST00000610468 TRBV6-5A0A0K0K1A5 114 aa8.86□□□□□ -0.99
MUC1-222ENST00000610468 RIGQ13278 110 aa8.86□□□□□ -0.99
MUC1-222ENST00000610468 FAM104BQ5XKR9 115 aa8.86□□□□□ -0.99
MUC1-222ENST00000610468 Q6ZRU5 148 aa8.86□□□□□ -0.99
MUC1-222ENST00000610468 NRACQ8N912 160 aa8.86□□□□□ -0.99
MUC1-222ENST00000610468 hDV102S1A0JD36 115 aa8.85□□□□□ -0.99
MUC1-222ENST00000610468 SLPIP03973 132 aa8.85□□□□□ -0.99
MUC1-222ENST00000610468 S100PP25815 95 aa8.85□□□□□ -0.99
MUC1-222ENST00000610468 CBLN2Q8IUK8 224 aa8.85□□□□□ -0.99
MUC1-222ENST00000610468 TMEM243Q9BU79 118 aa8.85□□□□□ -0.99
MUC1-222ENST00000610468 IGLV4-60A0A075B6I1 120 aa8.84□□□□□ -0.99
MUC1-222ENST00000610468 TRAV9-1A0A075B6T8 112 aa8.84□□□□□ -0.99
MUC1-222ENST00000610468 POLR2KP53803 58 aaKnown RBP8.84□□□□□ -0.99
MUC1-222ENST00000610468 MRPL51Q4U2R6 128 aaKnown RBP8.84□□□□□ -0.99
MUC1-222ENST00000610468 MRPL54Q6P161 138 aaKnown RBP8.84□□□□□ -0.99
MUC1-222ENST00000610468 SPACA4Q8TDM5 124 aa8.84□□□□□ -0.99
MUC1-222ENST00000610468 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
MUC1-222ENST00000610468 A0A1B0GW15 77 aa8.83□□□□□ -1
MUC1-222ENST00000610468 SMKR1H3BMG3 65 aa8.83□□□□□ -1
MUC1-222ENST00000610468 ATP5L2Q7Z4Y8 100 aa8.83□□□□□ -1
MUC1-222ENST00000610468 TRBV24-1A0A075B6N3 115 aa8.82□□□□□ -1
MUC1-222ENST00000610468 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
MUC1-222ENST00000610468 CAMPP49913 170 aa8.82□□□□□ -1
MUC1-222ENST00000610468 HBBP68871 147 aa8.82□□□□□ -1
MUC1-222ENST00000610468 MRAP2Q96G30 205 aa8.82□□□□□ -1
MUC1-222ENST00000610468 A0A087WYN8 130 aa8.81□□□□□ -1
MUC1-222ENST00000610468 COLCA2A8K830 154 aa8.81□□□□□ -1
MUC1-222ENST00000610468 CHTF8P0CG12 524 aa8.81□□□□□ -1
MUC1-222ENST00000610468 BORCS7Q96B45 105 aa8.81□□□□□ -1
MUC1-222ENST00000610468 YPEL4Q96NS1 127 aa8.81□□□□□ -1
MUC1-222ENST00000610468 AP5S1Q9NUS5 200 aa8.81□□□□□ -1
MUC1-222ENST00000610468 PLAC8Q9NZF1 115 aa8.81□□□□□ -1
MUC1-222ENST00000610468 NCR2O95944 276 aa8.8□□□□□ -1
MUC1-222ENST00000610468 RAB5AP20339 215 aa8.8□□□□□ -1
MUC1-222ENST00000610468 SMIM15Q7Z3B0 74 aa8.8□□□□□ -1
MUC1-222ENST00000610468 C15orf56Q8N910 161 aa8.8□□□□□ -1
MUC1-222ENST00000610468 TRBV27A0A0K0K1C4 114 aa8.79□□□□□ -1
MUC1-222ENST00000610468 SDHAF1A6NFY7 115 aa8.79□□□□□ -1
MUC1-222ENST00000610468 RAB5BP61020 215 aa8.79□□□□□ -1
MUC1-222ENST00000610468 TMEM136Q6ZRR5 245 aa8.79□□□□□ -1
MUC1-222ENST00000610468 TSHBP01222 138 aa8.78□□□□□ -1
MUC1-222ENST00000610468 ESDP10768 282 aa8.78□□□□□ -1
MUC1-222ENST00000610468 AMTP48728 403 aa8.78□□□□□ -1
MUC1-222ENST00000610468 COTL1Q14019 142 aa8.78□□□□□ -1
MUC1-222ENST00000610468 COX19Q49B96 90 aa8.78□□□□□ -1
MUC1-222ENST00000610468 TMA7Q9Y2S6 64 aaKnown RBP8.78□□□□□ -1
MUC1-222ENST00000610468 PRSS47A8MTI9 375 aa8.77□□□□□ -1.01
MUC1-222ENST00000610468 C1orf196B1AJZ1 125 aa8.77□□□□□ -1.01
MUC1-222ENST00000610468 UBE2L6O14933 153 aa8.77□□□□□ -1.01
MUC1-222ENST00000610468 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1.01
MUC1-222ENST00000610468 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
MUC1-222ENST00000610468 D6R8Y8 96 aa8.76□□□□□ -1.01
MUC1-222ENST00000610468 PHOX2AO14813 284 aa8.76□□□□□ -1.01
MUC1-222ENST00000610468 NPYP01303 97 aa8.76□□□□□ -1.01
MUC1-222ENST00000610468 S100A8P05109 93 aa8.76□□□□□ -1.01
MUC1-222ENST00000610468 CFAP161Q6P656 301 aa8.76□□□□□ -1.01
MUC1-222ENST00000610468 DPH3Q96FX2 82 aa8.76□□□□□ -1.01
MUC1-222ENST00000610468 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
MUC1-222ENST00000610468 TNFRSF6BO95407 300 aa8.75□□□□□ -1.01
MUC1-222ENST00000610468 SUMO2P61956 95 aaKnown RBP8.75□□□□□ -1.01
MUC1-222ENST00000610468 COX6A2Q02221 97 aa8.75□□□□□ -1.01
MUC1-222ENST00000610468 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
MUC1-222ENST00000610468 C20orf78Q9BR46 151 aa8.75□□□□□ -1.01
MUC1-222ENST00000610468 ST20Q9HBF5 79 aa8.75□□□□□ -1.01
MUC1-222ENST00000610468 TNXBP22105 4242 aa8.75□□□□□ -1.01
MUC1-222ENST00000610468 I3L3M4 83 aa8.74□□□□□ -1.01
MUC1-222ENST00000610468 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
MUC1-222ENST00000610468 PPBPP02775 128 aa8.73□□□□□ -1.01
MUC1-222ENST00000610468 CKS2P33552 79 aa8.73□□□□□ -1.01
MUC1-222ENST00000610468 PRR3P79522 188 aaKnown RBP8.73□□□□□ -1.01
MUC1-222ENST00000610468 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
MUC1-222ENST00000610468 PRSS3P2Q8NHM4 247 aa8.73□□□□□ -1.01
MUC1-222ENST00000610468 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
MUC1-222ENST00000610468 LRP2P98164 4655 aa8.72□□□□□ -1.01
MUC1-222ENST00000610468 H7C423 109 aa8.72□□□□□ -1.01
MUC1-222ENST00000610468 VCYO14598 125 aa8.72□□□□□ -1.01
MUC1-222ENST00000610468 MT-ND6P03923 174 aa8.72□□□□□ -1.01
MUC1-222ENST00000610468 LINC01600Q96MT4 127 aa8.72□□□□□ -1.01
MUC1-222ENST00000610468 GNB1LQ9BYB4 327 aa8.72□□□□□ -1.01
MUC1-222ENST00000610468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
MUC1-222ENST00000610468 TGIF2-C20orf24A0A0A6YYL0 155 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 IGKV3OR2-268A0A0C4DH90 116 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
MUC1-222ENST00000610468 PPP1R17O96001 155 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 S100A6P06703 90 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 FGF6P10767 208 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 FOXI1Q12951 378 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 MAJINQ3KP22 176 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 AMMECR1LQ6DCA0 310 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 ORMDL3Q8N138 153 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
MUC1-222ENST00000610468 RNF213Q63HN8 5207 aa8.7□□□□□ -1.02
MUC1-222ENST00000610468 IGKV2-24A0A0C4DH68 120 aa8.7□□□□□ -1.02
MUC1-222ENST00000610468 PMCHP20382 165 aa8.7□□□□□ -1.02
MUC1-222ENST00000610468 STPG4Q8N801 248 aa8.7□□□□□ -1.02
MUC1-222ENST00000610468 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms