RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 TMEM242Q9NWH2 141 aa9.78□□□□□ -0.84
LMBR1-220ENST00000609081 TRBV24-1A0A075B6N3 115 aa9.77□□□□□ -0.85
LMBR1-220ENST00000609081 HBBP68871 147 aa9.77□□□□□ -0.85
LMBR1-220ENST00000609081 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.85
LMBR1-220ENST00000609081 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
LMBR1-220ENST00000609081 NRACQ8N912 160 aa9.77□□□□□ -0.85
LMBR1-220ENST00000609081 CHCHD10Q8WYQ3 142 aaPredicted RBP9.77□□□□□ -0.85
LMBR1-220ENST00000609081 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
LMBR1-220ENST00000609081 GAGE12HA6NDE8 117 aa9.76□□□□□ -0.85
LMBR1-220ENST00000609081 CKS2P33552 79 aa9.76□□□□□ -0.85
LMBR1-220ENST00000609081 RPL32P62910 135 aaKnown RBP9.76□□□□□ -0.85
LMBR1-220ENST00000609081 CIRBP-AS1Q8TBR5 109 aa9.76□□□□□ -0.85
LMBR1-220ENST00000609081 TMEM18Q96B42 140 aa9.76□□□□□ -0.85
LMBR1-220ENST00000609081 CSDC2Q9Y534 153 aaKnown RBP9.76□□□□□ -0.85
LMBR1-220ENST00000609081 VPS13BQ7Z7G8 4022 aa9.75□□□□□ -0.85
LMBR1-220ENST00000609081 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
LMBR1-220ENST00000609081 CCL25O15444 150 aa9.75□□□□□ -0.85
LMBR1-220ENST00000609081 PPBPP02775 128 aa9.75□□□□□ -0.85
LMBR1-220ENST00000609081 MRPL51Q4U2R6 128 aaKnown RBP9.75□□□□□ -0.85
LMBR1-220ENST00000609081 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
LMBR1-220ENST00000609081 A0A1B0GXF2 115 aa9.74□□□□□ -0.85
LMBR1-220ENST00000609081 SMKR1H3BMG3 65 aa9.74□□□□□ -0.85
LMBR1-220ENST00000609081 PHOX2AO14813 284 aa9.74□□□□□ -0.85
LMBR1-220ENST00000609081 SS18Q15532 418 aa9.74□□□□□ -0.85
LMBR1-220ENST00000609081 SDIM1Q6ZPB5 146 aa9.74□□□□□ -0.85
LMBR1-220ENST00000609081 CDC42SE2Q9NRR3 84 aa9.74□□□□□ -0.85
LMBR1-220ENST00000609081 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
LMBR1-220ENST00000609081 FLG2Q5D862 2391 aaPredicted RBP9.73□□□□□ -0.85
LMBR1-220ENST00000609081 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
LMBR1-220ENST00000609081 MT-ND4LP03901 98 aa9.73□□□□□ -0.85
LMBR1-220ENST00000609081 MRPL54Q6P161 138 aaKnown RBP9.73□□□□□ -0.85
LMBR1-220ENST00000609081 ZNF664Q8N3J9 261 aa9.73□□□□□ -0.85
LMBR1-220ENST00000609081 C15orf56Q8N910 161 aa9.73□□□□□ -0.85
LMBR1-220ENST00000609081 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
LMBR1-220ENST00000609081 GVQW2A0A096LPI5 108 aaPredicted RBP9.72□□□□□ -0.85
LMBR1-220ENST00000609081 FOXI1Q12951 378 aa9.72□□□□□ -0.85
LMBR1-220ENST00000609081 CLLU1Q5K131 121 aa9.72□□□□□ -0.85
LMBR1-220ENST00000609081 TIMM21Q9BVV7 248 aa9.72□□□□□ -0.85
LMBR1-220ENST00000609081 TNFRSF6BO95407 300 aa9.71□□□□□ -0.86
LMBR1-220ENST00000609081 CIRBPQ14011 172 aaKnown RBP9.71□□□□□ -0.86
LMBR1-220ENST00000609081 CD164L2Q6UWJ8 174 aa9.71□□□□□ -0.86
LMBR1-220ENST00000609081 PKIGQ9Y2B9 76 aa9.71□□□□□ -0.86
LMBR1-220ENST00000609081 C1orf196B1AJZ1 125 aa9.7□□□□□ -0.86
LMBR1-220ENST00000609081 D6R8Y8 96 aa9.7□□□□□ -0.86
LMBR1-220ENST00000609081 XCL1P47992 114 aa9.7□□□□□ -0.86
LMBR1-220ENST00000609081 SMIM2Q9BVW6 85 aa9.7□□□□□ -0.86
LMBR1-220ENST00000609081 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
LMBR1-220ENST00000609081 IGHV1-58A0A0C4DH39 117 aa9.69□□□□□ -0.86
LMBR1-220ENST00000609081 UQCC3Q6UW78 93 aa9.69□□□□□ -0.86
LMBR1-220ENST00000609081 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
LMBR1-220ENST00000609081 LAMTOR2Q9Y2Q5 125 aa9.69□□□□□ -0.86
LMBR1-220ENST00000609081 SLPIP03973 132 aa9.68□□□□□ -0.86
LMBR1-220ENST00000609081 SPANXA1Q9NS26 97 aa9.67□□□□□ -0.86
LMBR1-220ENST00000609081 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.67□□□□□ -0.86
LMBR1-220ENST00000609081 NPYP01303 97 aa9.66□□□□□ -0.86
LMBR1-220ENST00000609081 HIGD2BQ4VC39 106 aa9.66□□□□□ -0.86
LMBR1-220ENST00000609081 TMEM136Q6ZRR5 245 aa9.66□□□□□ -0.86
LMBR1-220ENST00000609081 MYCBP2O75592 4640 aa9.65□□□□□ -0.86
LMBR1-220ENST00000609081 COX7A2LO14548 114 aa9.65□□□□□ -0.86
LMBR1-220ENST00000609081 RAB5AP20339 215 aa9.65□□□□□ -0.86
LMBR1-220ENST00000609081 DPH3Q96FX2 82 aa9.65□□□□□ -0.86
LMBR1-220ENST00000609081 PRELID3AQ96N28 172 aa9.65□□□□□ -0.86
LMBR1-220ENST00000609081 IMMP2LQ96T52 175 aa9.65□□□□□ -0.86
LMBR1-220ENST00000609081 PRSS47A8MTI9 375 aa9.64□□□□□ -0.87
LMBR1-220ENST00000609081 ZNF561-AS1K7EIQ3 104 aa9.64□□□□□ -0.87
LMBR1-220ENST00000609081 MALP21145 153 aa9.64□□□□□ -0.87
LMBR1-220ENST00000609081 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
LMBR1-220ENST00000609081 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
LMBR1-220ENST00000609081 SPACA4Q8TDM5 124 aa9.64□□□□□ -0.87
LMBR1-220ENST00000609081 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
LMBR1-220ENST00000609081 PANO1I0J062 215 aa9.63□□□□□ -0.87
LMBR1-220ENST00000609081 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
LMBR1-220ENST00000609081 TRAV13-1A0A0B4J241 112 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 K7EMI3 77 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 APOMO95445 188 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 RPL39P62891 51 aaKnown RBP9.62□□□□□ -0.87
LMBR1-220ENST00000609081 COX6A2Q02221 97 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 Q6ZUT4 128 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 CARD19Q96LW7 228 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 CTDSP1Q9GZU7 261 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 MAP1LC3AQ9H492 121 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 PLAC8Q9NZF1 115 aa9.62□□□□□ -0.87
LMBR1-220ENST00000609081 TRAV9-1A0A075B6T8 112 aa9.61□□□□□ -0.87
LMBR1-220ENST00000609081 A0A087WYN8 130 aa9.61□□□□□ -0.87
LMBR1-220ENST00000609081 TMEM218A2RU14 115 aa9.61□□□□□ -0.87
LMBR1-220ENST00000609081 IFI27P40305 119 aaPredicted RBP9.61□□□□□ -0.87
LMBR1-220ENST00000609081 PYGO1Q9Y3Y4 419 aa9.61□□□□□ -0.87
LMBR1-220ENST00000609081 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
LMBR1-220ENST00000609081 J3QL48 77 aa9.6□□□□□ -0.87
LMBR1-220ENST00000609081 SYCNQ0VAF6 134 aa9.6□□□□□ -0.87
LMBR1-220ENST00000609081 RNASE13Q5GAN3 156 aaKnown RBP9.6□□□□□ -0.87
LMBR1-220ENST00000609081 SEC11CQ9BY50 192 aa9.6□□□□□ -0.87
LMBR1-220ENST00000609081 CHTF8P0CG12 524 aa9.59□□□□□ -0.87
LMBR1-220ENST00000609081 IFITM2Q01629 132 aa9.59□□□□□ -0.87
LMBR1-220ENST00000609081 PRSS3P2Q8NHM4 247 aa9.59□□□□□ -0.87
LMBR1-220ENST00000609081 C2orf48Q96LS8 159 aa9.59□□□□□ -0.87
LMBR1-220ENST00000609081 F8WDY8 70 aa9.58□□□□□ -0.88
LMBR1-220ENST00000609081 G0S2P27469 103 aa9.58□□□□□ -0.88
LMBR1-220ENST00000609081 Q8N8P6 123 aa9.58□□□□□ -0.88
LMBR1-220ENST00000609081 OR10D4PQ8NGN7 298 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms