RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 FAM74A7A6NL05 159 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 M0QXV9 152 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 IL7P13232 177 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 ATP6V0CP27449 155 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 RNF151Q2KHN1 245 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 HIST1H2BAQ96A08 127 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 FMC1Q96HJ9 113 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 TMEM101Q96IK0 257 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 BTF3L4Q96K17 158 aa5.29□□□□□ -1.56
CTCFL-220ENST00000608858 ACTR3CQ9C0K3 210 aaPredicted RBP5.29□□□□□ -1.56
CTCFL-220ENST00000608858 C19orf71A6NCJ1 209 aa5.28□□□□□ -1.56
CTCFL-220ENST00000608858 LYRM1O43325 122 aa5.28□□□□□ -1.56
CTCFL-220ENST00000608858 NOL3O60936 208 aaKnown RBP5.28□□□□□ -1.56
CTCFL-220ENST00000608858 LTAP01374 205 aa5.28□□□□□ -1.56
CTCFL-220ENST00000608858 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
CTCFL-220ENST00000608858 C10orf25Q5T742 122 aa5.28□□□□□ -1.56
CTCFL-220ENST00000608858 PPP1R1CQ8WVI7 109 aa5.28□□□□□ -1.56
CTCFL-220ENST00000608858 CTDSP1Q9GZU7 261 aa5.28□□□□□ -1.56
CTCFL-220ENST00000608858 INMT-MINDY4F8WBC2 141 aa5.27□□□□□ -1.57
CTCFL-220ENST00000608858 COX7A2LO14548 114 aa5.27□□□□□ -1.57
CTCFL-220ENST00000608858 SEC61BP60468 96 aaKnown RBP5.27□□□□□ -1.57
CTCFL-220ENST00000608858 UNQ6190/PRO20217Q6UXQ8 127 aa5.27□□□□□ -1.57
CTCFL-220ENST00000608858 OR2D3Q8NGH3 330 aa5.27□□□□□ -1.57
CTCFL-220ENST00000608858 RPL39LQ96EH5 51 aaKnown RBP5.27□□□□□ -1.57
CTCFL-220ENST00000608858 C2orf48Q96LS8 159 aa5.27□□□□□ -1.57
CTCFL-220ENST00000608858 SYNE2Q8WXH0 6885 aaKnown RBP5.26□□□□□ -1.57
CTCFL-220ENST00000608858 CCDC160A6NGH7 325 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 M0R2T5 61 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 APCSP02743 223 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 ESDP10768 282 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 SPAG11BQ08648 103 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 ZNF726P1Q15940 193 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 RNASE13Q5GAN3 156 aaKnown RBP5.26□□□□□ -1.57
CTCFL-220ENST00000608858 LINC00242Q5T6M2 205 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 CST9LP1Q5W188 147 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 GATD1Q8NB37 220 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 CDC42SE2Q9NRR3 84 aa5.26□□□□□ -1.57
CTCFL-220ENST00000608858 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
CTCFL-220ENST00000608858 MPC2O95563 127 aa5.25□□□□□ -1.57
CTCFL-220ENST00000608858 H2BFSP57053 126 aa5.25□□□□□ -1.57
CTCFL-220ENST00000608858 IMMP2LQ96T52 175 aa5.25□□□□□ -1.57
CTCFL-220ENST00000608858 TRAV13-1A0A0B4J241 112 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 H7C423 109 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 CXCL1P09341 107 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 PMCHP20382 165 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 AKR1C3P42330 323 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 BAGE2Q86Y30 109 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 STOML3Q8TAV4 291 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 ALG5Q9Y673 324 aa5.24□□□□□ -1.57
CTCFL-220ENST00000608858 MBP02144 154 aa5.23□□□□□ -1.57
CTCFL-220ENST00000608858 NKX6-2Q9C056 277 aaPredicted RBP5.23□□□□□ -1.57
CTCFL-220ENST00000608858 MED28Q9H204 178 aa5.23□□□□□ -1.57
CTCFL-220ENST00000608858 C6orf48Q9UBA6 75 aa5.23□□□□□ -1.57
CTCFL-220ENST00000608858 IGKV2D-26A0A0A0MRZ7 120 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 FAM240BA0A1B0GVZ2 78 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 C9orf118A6NHY6 69 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 C1orf196B1AJZ1 125 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 ZNF25P17030 456 aaPredicted RBP5.22□□□□□ -1.57
CTCFL-220ENST00000608858 RPL28P46779 137 aaKnown RBP5.22□□□□□ -1.57
CTCFL-220ENST00000608858 FOXA3P55318 350 aaPredicted RBP5.22□□□□□ -1.57
CTCFL-220ENST00000608858 C9orf129Q5T035 196 aaKnown RBP5.22□□□□□ -1.57
CTCFL-220ENST00000608858 MZT2BQ6NZ67 158 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 LYZL1Q6UWQ5 148 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 ORAOV1Q8WV07 137 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 MRPL35Q9NZE8 188 aaKnown RBP5.22□□□□□ -1.57
CTCFL-220ENST00000608858 TNFSF18Q9UNG2 199 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 C22orf24Q9Y442 160 aa5.22□□□□□ -1.57
CTCFL-220ENST00000608858 SDHAF1A6NFY7 115 aa5.21□□□□□ -1.58
CTCFL-220ENST00000608858 G3V3Q6 166 aa5.21□□□□□ -1.58
CTCFL-220ENST00000608858 NCR2O95944 276 aa5.21□□□□□ -1.58
CTCFL-220ENST00000608858 IGLC6P0CF74 106 aa5.21□□□□□ -1.58
CTCFL-220ENST00000608858 SERF2P84101 59 aa5.21□□□□□ -1.58
CTCFL-220ENST00000608858 PSMG3Q9BT73 122 aaPredicted RBP5.21□□□□□ -1.58
CTCFL-220ENST00000608858 SMDT1Q9H4I9 107 aa5.21□□□□□ -1.58
CTCFL-220ENST00000608858 CTXND1A0A1B0GTU2 59 aa5.2□□□□□ -1.58
CTCFL-220ENST00000608858 I3L3M4 83 aa5.2□□□□□ -1.58
CTCFL-220ENST00000608858 NDUFA1O15239 70 aa5.2□□□□□ -1.58
CTCFL-220ENST00000608858 PAGE4O60829 102 aa5.2□□□□□ -1.58
CTCFL-220ENST00000608858 TRGC1P0CF51 173 aa5.2□□□□□ -1.58
CTCFL-220ENST00000608858 TWIST1Q15672 202 aa5.2□□□□□ -1.58
CTCFL-220ENST00000608858 TMEM241Q24JQ0 296 aa5.2□□□□□ -1.58
CTCFL-220ENST00000608858 LINC00469Q8N7U9 141 aa5.2□□□□□ -1.58
CTCFL-220ENST00000608858 RPL37AP8A6NKH3 93 aa5.19□□□□□ -1.58
CTCFL-220ENST00000608858 TLX1NBP0CAT3 122 aa5.19□□□□□ -1.58
CTCFL-220ENST00000608858 C3orf22Q8N5N4 141 aa5.19□□□□□ -1.58
CTCFL-220ENST00000608858 MRAP2Q96G30 205 aa5.19□□□□□ -1.58
CTCFL-220ENST00000608858 MARVELD1Q9BSK0 173 aa5.19□□□□□ -1.58
CTCFL-220ENST00000608858 RNASE7Q9H1E1 156 aaKnown RBP5.19□□□□□ -1.58
CTCFL-220ENST00000608858 TMEM242Q9NWH2 141 aa5.19□□□□□ -1.58
CTCFL-220ENST00000608858 A0A1B0GV50 99 aa5.18□□□□□ -1.58
CTCFL-220ENST00000608858 NUPR1O60356 82 aa5.18□□□□□ -1.58
CTCFL-220ENST00000608858 BCE1O60756 84 aa5.18□□□□□ -1.58
CTCFL-220ENST00000608858 PET100P0DJ07 73 aa5.18□□□□□ -1.58
CTCFL-220ENST00000608858 TMUB2Q71RG4 321 aa5.18□□□□□ -1.58
CTCFL-220ENST00000608858 C2orf82Q6UX34 121 aa5.17□□□□□ -1.58
CTCFL-220ENST00000608858 OR10D4PQ8NGN7 298 aa5.17□□□□□ -1.58
CTCFL-220ENST00000608858 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
CTCFL-220ENST00000608858 MAP1LC3B2A6NCE7 125 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms