RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 Q1RN00 199 aa10.67□□□□□ -0.7
CTCFL-219ENST00000608720 CEMP1Q6PRD7 247 aaPredicted RBP10.67□□□□□ -0.7
CTCFL-219ENST00000608720 TMEM101Q96IK0 257 aa10.67□□□□□ -0.7
CTCFL-219ENST00000608720 DNAJC30Q96LL9 226 aa10.67□□□□□ -0.7
CTCFL-219ENST00000608720 CHCHD7Q9BUK0 85 aa10.67□□□□□ -0.7
CTCFL-219ENST00000608720 SPANXCQ9NY87 97 aa10.67□□□□□ -0.7
CTCFL-219ENST00000608720 SPG11Q96JI7 2443 aa10.67□□□□□ -0.7
CTCFL-219ENST00000608720 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
CTCFL-219ENST00000608720 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
CTCFL-219ENST00000608720 H7C423 109 aa10.66□□□□□ -0.7
CTCFL-219ENST00000608720 FSHBP01225 129 aa10.66□□□□□ -0.7
CTCFL-219ENST00000608720 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
CTCFL-219ENST00000608720 TRAV8-3A0A0A6YYJ7 113 aa10.66□□□□□ -0.7
CTCFL-219ENST00000608720 VSIG2Q96IQ7 327 aa10.66□□□□□ -0.7
CTCFL-219ENST00000608720 LINC00467Q9BRT7 94 aa10.66□□□□□ -0.7
CTCFL-219ENST00000608720 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
CTCFL-219ENST00000608720 UBE2D4Q9Y2X8 147 aa10.66□□□□□ -0.7
CTCFL-219ENST00000608720 NOTCH2Q04721 2471 aa10.65□□□□□ -0.7
CTCFL-219ENST00000608720 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.7
CTCFL-219ENST00000608720 PRSS2P07478 247 aa10.65□□□□□ -0.7
CTCFL-219ENST00000608720 COX6CP09669 75 aa10.65□□□□□ -0.7
CTCFL-219ENST00000608720 Q6ZSN1 163 aa10.65□□□□□ -0.7
CTCFL-219ENST00000608720 PEMTQ9UBM1 199 aa10.65□□□□□ -0.7
CTCFL-219ENST00000608720 ATP5G1P05496 136 aa10.65□□□□□ -0.71
CTCFL-219ENST00000608720 CSPG4Q6UVK1 2322 aa10.64□□□□□ -0.71
CTCFL-219ENST00000608720 RNASE13Q5GAN3 156 aaKnown RBP10.64□□□□□ -0.71
CTCFL-219ENST00000608720 MAPK1IP1LQ8NDC0 245 aa10.64□□□□□ -0.71
CTCFL-219ENST00000608720 BEX4Q9NWD9 120 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-219ENST00000608720 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
CTCFL-219ENST00000608720 PRM2P04554 102 aa10.64□□□□□ -0.71
CTCFL-219ENST00000608720 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
CTCFL-219ENST00000608720 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
CTCFL-219ENST00000608720 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
CTCFL-219ENST00000608720 APCP25054 2843 aa10.63□□□□□ -0.71
CTCFL-219ENST00000608720 IGHV3-53P01767 116 aa10.63□□□□□ -0.71
CTCFL-219ENST00000608720 MIAQ16674 131 aa10.63□□□□□ -0.71
CTCFL-219ENST00000608720 BEAN1Q3B7T3 259 aa10.63□□□□□ -0.71
CTCFL-219ENST00000608720 TMEM61Q8N0U2 210 aa10.63□□□□□ -0.71
CTCFL-219ENST00000608720 PPDPFQ9H3Y8 114 aa10.63□□□□□ -0.71
CTCFL-219ENST00000608720 Q9UF83 564 aa10.63□□□□□ -0.71
CTCFL-219ENST00000608720 LST1O00453 97 aa10.62□□□□□ -0.71
CTCFL-219ENST00000608720 ADAMTSL4-AS1Q5T5F5 129 aa10.62□□□□□ -0.71
CTCFL-219ENST00000608720 Q8N2B8 174 aa10.62□□□□□ -0.71
CTCFL-219ENST00000608720 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-219ENST00000608720 IGKV2-29A2NJV5 120 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-219ENST00000608720 C11orf72Q8NBR9 251 aa10.62□□□□□ -0.71
CTCFL-219ENST00000608720 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
CTCFL-219ENST00000608720 RS1O15537 224 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 TIMM17BO60830 172 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 UQCRQO14949 82 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 INSP01308 110 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 IGHV4-31P0DP07 118 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 TIRAPP58753 221 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 C3orf22Q8N5N4 141 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 DYNLRB2Q8TF09 96 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 C4orf3Q8WVX3 66 aa10.61□□□□□ -0.71
CTCFL-219ENST00000608720 A0A1B0GX51 115 aa10.6□□□□□ -0.71
CTCFL-219ENST00000608720 LRRC75A-AS1Q8N1F1 130 aa10.6□□□□□ -0.71
CTCFL-219ENST00000608720 UNC79Q9P2D8 2635 aa10.59□□□□□ -0.71
CTCFL-219ENST00000608720 ZNF469Q96JG9 3925 aaPredicted RBP10.59□□□□□ -0.71
CTCFL-219ENST00000608720 NDUFA7O95182 113 aa10.59□□□□□ -0.71
CTCFL-219ENST00000608720 C5orf47Q569G3 176 aa10.59□□□□□ -0.71
CTCFL-219ENST00000608720 SORL1Q92673 2214 aa10.59□□□□□ -0.71
CTCFL-219ENST00000608720 IGHV3-38A0A0C4DH36 116 aa10.58□□□□□ -0.72
CTCFL-219ENST00000608720 A8MZ25 164 aa10.58□□□□□ -0.72
CTCFL-219ENST00000608720 DEFB114Q30KQ6 69 aa10.58□□□□□ -0.72
CTCFL-219ENST00000608720 LINC00526Q96FQ7 95 aa10.58□□□□□ -0.72
CTCFL-219ENST00000608720 CSDC2Q9Y534 153 aaKnown RBP10.58□□□□□ -0.72
CTCFL-219ENST00000608720 IGLV5-45A0A087WSX0 123 aa10.58□□□□□ -0.72
CTCFL-219ENST00000608720 FAM236AA0A1B0GUQ0 79 aa10.58□□□□□ -0.72
CTCFL-219ENST00000608720 FAM236BA0A1B0GV22 79 aa10.58□□□□□ -0.72
CTCFL-219ENST00000608720 SDIM1Q6ZPB5 146 aa10.58□□□□□ -0.72
CTCFL-219ENST00000608720 DGAT2L7PQ6IED9 249 aa10.57□□□□□ -0.72
CTCFL-219ENST00000608720 LINC00643Q86TS7 51 aa10.57□□□□□ -0.72
CTCFL-219ENST00000608720 NDUFA1O15239 70 aa10.57□□□□□ -0.72
CTCFL-219ENST00000608720 C9orf153Q5TBE3 101 aa10.57□□□□□ -0.72
CTCFL-219ENST00000608720 CDKN2A-AS1Q9UH64 79 aa10.57□□□□□ -0.72
CTCFL-219ENST00000608720 TEX15Q9BXT5 2789 aa10.56□□□□□ -0.72
CTCFL-219ENST00000608720 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
CTCFL-219ENST00000608720 CXCL5P42830 114 aa10.56□□□□□ -0.72
CTCFL-219ENST00000608720 RPS28P62857 69 aaKnown RBP10.56□□□□□ -0.72
CTCFL-219ENST00000608720 CIRBPQ14011 172 aaKnown RBP10.56□□□□□ -0.72
CTCFL-219ENST00000608720 KHDC1LQ5JSQ8 128 aa10.56□□□□□ -0.72
CTCFL-219ENST00000608720 CREBBPQ92793 2442 aa10.55□□□□□ -0.72
CTCFL-219ENST00000608720 J3KT08 172 aa10.54□□□□□ -0.72
CTCFL-219ENST00000608720 NPC2P61916 151 aa10.54□□□□□ -0.72
CTCFL-219ENST00000608720 HERVK_113P63121 156 aa10.54□□□□□ -0.72
CTCFL-219ENST00000608720 AKAP9Q99996 3911 aa10.54□□□□□ -0.72
CTCFL-219ENST00000608720 CCDC168Q8NDH2 2452 aa10.53□□□□□ -0.72
CTCFL-219ENST00000608720 IGHV3OR16-12A0A075B7B8 117 aa10.53□□□□□ -0.72
CTCFL-219ENST00000608720 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
CTCFL-219ENST00000608720 XCL2Q9UBD3 114 aa10.53□□□□□ -0.72
CTCFL-219ENST00000608720 PRRC2AP48634 2157 aaKnown RBP10.52□□□□□ -0.72
CTCFL-219ENST00000608720 IGLV5-39A0A0G2JS06 123 aa10.52□□□□□ -0.73
CTCFL-219ENST00000608720 COX6A2Q02221 97 aa10.52□□□□□ -0.73
CTCFL-219ENST00000608720 FAM19A3Q7Z5A8 133 aa10.52□□□□□ -0.73
CTCFL-219ENST00000608720 C5orf38Q86SI9 138 aa10.52□□□□□ -0.73
CTCFL-219ENST00000608720 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-219ENST00000608720 CLEC2BQ92478 149 aa10.52□□□□□ -0.73
CTCFL-219ENST00000608720 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms