RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 CRCT1Q9UGL9 99 aa9.15□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 FXYD6-FXYD2A0A087WZ82 144 aa9.14□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 C19orf71A6NCJ1 209 aa9.14□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 C1orf196B1AJZ1 125 aa9.14□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 I3L3M4 83 aa9.14□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 FAM19A5Q7Z5A7 132 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 KRTAP11-1Q8IUC1 163 aa9.14□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 CDC42SE2Q9NRR3 84 aa9.14□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 FAM168BA1KXE4 195 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 ESDP10768 282 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 RNF151Q2KHN1 245 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 Q5BKY6 102 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 TEX261Q6UWH6 196 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 SMIM15Q7Z3B0 74 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 KCNRGQ8N5I3 272 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 IMMP2LQ96T52 175 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 ALG5Q9Y673 324 aa9.12□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 SPAG11BQ08648 103 aa9.11□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 CENPWQ5EE01 88 aa9.11□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 C9orf62Q8N4C0 152 aa9.11□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 CTRLP40313 264 aa9.1□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 FAM213BQ8TBF2 198 aa9.1□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 G3V3Q6 166 aa9.09□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 M0QXV9 152 aa9.09□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 GNG4P50150 75 aa9.09□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 MBD3L1Q8WWY6 194 aa9.09□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 TMEM242Q9NWH2 141 aa9.09□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 MRPL35Q9NZE8 188 aaKnown RBP9.09□□□□□ -0.95
NEDD8-MDP1-204ENST00000605847 GIPP09681 153 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 GAGE2EQ4V326 116 aa9.08□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 SMIM12Q96EX1 92 aa9.08□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 FAM210AQ96ND0 272 aa9.08□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 RPP21Q9H633 154 aaKnown RBP9.08□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 BIN3Q9NQY0 253 aa9.08□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 GAGE2DQ9UEU5 116 aa9.08□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 TRAV13-1A0A0B4J241 112 aa9.07□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 C7orf77A4D0Y5 90 aa9.07□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 NDUFA1O15239 70 aa9.07□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 TSHBP01222 138 aa9.07□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 TYMSOSQ8TAI1 123 aa9.07□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 CNFNQ9BYD5 112 aa9.07□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 ZNF861PO60384 105 aa9.06□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 C11orf52Q96A22 123 aa9.06□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 RAB19A4D1S5 217 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 UMAD1C9J7I0 102 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 F8WDY8 70 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 H2AFB1P0C5Y9 115 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 TMEM241Q24JQ0 296 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 RNASE13Q5GAN3 156 aaKnown RBP9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 ORAOV1Q8WV07 137 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 MANBALQ9NQG1 85 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 CYTL1Q9NRR1 136 aa9.05□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 FOXA3P55318 350 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 LINC01547P58512 204 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 CCL20P78556 96 aa9.04□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 ARPC5O15511 151 aa9.03□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 CRYGAP11844 174 aa9.03□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 NUDT10Q8NFP7 164 aa9.03□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 NUDT11Q96G61 164 aa9.03□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 GNG13Q9P2W3 67 aa9.03□□□□□ -0.96
NEDD8-MDP1-204ENST00000605847 A0A087X002 238 aa9.02□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 RNASE7Q9H1E1 156 aaKnown RBP9.02□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 SMDT1Q9H4I9 107 aa9.02□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 FCER1GP30273 86 aa9.01□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 C10orf25Q5T742 122 aa9.01□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 KRTAP7-1Q8IUC3 87 aa9.01□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 CSDC2Q9Y534 153 aaKnown RBP9.01□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 UNQ6190/PRO20217Q6UXQ8 127 aa9□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 C6orf48Q9UBA6 75 aa9□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 UBE2D4Q9Y2X8 147 aa9□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 NUPR1O60356 82 aa8.99□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 POLR2KP53803 58 aaKnown RBP8.99□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 MUC17Q685J3 4493 aa8.99□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 LINC00173Q6ZV60 143 aa8.98□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 MED9Q9NWA0 146 aa8.98□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 TRBV20OR9-2A0A075B6H5 130 aa8.97□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 PDE6DO43924 150 aa8.97□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 Q6ZUT4 128 aa8.97□□□□□ -0.97
NEDD8-MDP1-204ENST00000605847 VCYO14598 125 aa8.96□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 RPL28P46779 137 aaKnown RBP8.96□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 TMEM18Q96B42 140 aa8.96□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 CTDSP1Q9GZU7 261 aa8.96□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 SRSF3P84103 164 aaKnown RBP8.95□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 BORCS7Q96B45 105 aa8.95□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 KIR2DL4Q99706 377 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms