RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869	C5orf47	Q569G3	176 aa		14.12	□□□□□ -0.15
STRN4-222	ENST00000601869	C2orf48	Q96LS8	159 aa		14.12	□□□□□ -0.15
STRN4-222	ENST00000601869	C22orf24	Q9Y442	160 aa		14.12	□□□□□ -0.15
STRN4-222	ENST00000601869		A8MTW9	85 aa		14.11	□□□□□ -0.15
STRN4-222	ENST00000601869	BLCAP	P62952	87 aa		14.11	□□□□□ -0.15
STRN4-222	ENST00000601869	DGAT2L7P	Q6IED9	249 aa		14.11	□□□□□ -0.15
STRN4-222	ENST00000601869	PSMB8	P28062	276 aa		14.11	□□□□□ -0.15
STRN4-222	ENST00000601869	GAGE2A	Q6NT46	116 aa		14.11	□□□□□ -0.15
STRN4-222	ENST00000601869	TRAV13-2	A0A0B4J235	113 aa		14.1	□□□□□ -0.15
STRN4-222	ENST00000601869	HIST2H2BC	Q6DN03	193 aa		14.1	□□□□□ -0.15
STRN4-222	ENST00000601869	HIST2H2BD	Q6DRA6	164 aa		14.1	□□□□□ -0.15
STRN4-222	ENST00000601869	SOSTDC1	Q6X4U4	206 aa		14.1	□□□□□ -0.15
STRN4-222	ENST00000601869		Q8N2B8	174 aa		14.1	□□□□□ -0.15
STRN4-222	ENST00000601869	NACA	E9PAV3	2078 aa		14.1	□□□□□ -0.15
STRN4-222	ENST00000601869	MAL	P21145	153 aa		14.1	□□□□□ -0.15
STRN4-222	ENST00000601869	RPL28	P46779	137 aa	Known RBP	14.1	□□□□□ -0.15
STRN4-222	ENST00000601869	ZNF625	Q96I27	306 aa	Predicted RBP	14.1	□□□□□ -0.15
STRN4-222	ENST00000601869	RBMY1A1	P0DJD3	496 aa	Known RBP	14.09	□□□□□ -0.15
STRN4-222	ENST00000601869	RBMY1C	P0DJD4	496 aa		14.09	□□□□□ -0.15
STRN4-222	ENST00000601869	RBMY1F	Q15415	496 aa	Known RBP	14.09	□□□□□ -0.15
STRN4-222	ENST00000601869	SPTAN1	Q13813	2472 aa	Known RBP	14.09	□□□□□ -0.15
STRN4-222	ENST00000601869	SMIM1	B2RUZ4	78 aa		14.09	□□□□□ -0.15
STRN4-222	ENST00000601869	LINC00242	Q5T6M2	205 aa		14.09	□□□□□ -0.15
STRN4-222	ENST00000601869	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	14.09	□□□□□ -0.15
STRN4-222	ENST00000601869	IGHV3OR16-12	A0A075B7B8	117 aa		14.07	□□□□□ -0.16
STRN4-222	ENST00000601869	PRIMA1	Q86XR5	153 aa		14.07	□□□□□ -0.16
STRN4-222	ENST00000601869	COL12A1	Q99715	3063 aa		14.07	□□□□□ -0.16
STRN4-222	ENST00000601869	COX6A2	Q02221	97 aa		14.07	□□□□□ -0.16
STRN4-222	ENST00000601869		Q6ZSN1	163 aa		14.07	□□□□□ -0.16
STRN4-222	ENST00000601869	IGSF10	Q6WRI0	2623 aa		14.07	□□□□□ -0.16
STRN4-222	ENST00000601869	RPL18A	Q02543	176 aa	Known RBP	14.06	□□□□□ -0.16
STRN4-222	ENST00000601869		Q6JHZ5	121 aa		14.06	□□□□□ -0.16
STRN4-222	ENST00000601869	DNAL4	O96015	105 aa		14.06	□□□□□ -0.16
STRN4-222	ENST00000601869	IGHV4-38-2	P0DP08	117 aa		14.06	□□□□□ -0.16
STRN4-222	ENST00000601869	FAM218A	Q96MZ4	157 aa		14.06	□□□□□ -0.16
STRN4-222	ENST00000601869	TMEM258	P61165	79 aa		14.05	□□□□□ -0.16
STRN4-222	ENST00000601869	OR13C6P	Q8NH95	151 aa		14.05	□□□□□ -0.16
STRN4-222	ENST00000601869	DOPEY2	Q9Y3R5	2298 aa		14.04	□□□□□ -0.16
STRN4-222	ENST00000601869	SMIM9	A6NGZ8	99 aa		14.04	□□□□□ -0.16
STRN4-222	ENST00000601869	KNCN	A6PVL3	124 aa		14.04	□□□□□ -0.16
STRN4-222	ENST00000601869	RS1	O15537	224 aa		14.04	□□□□□ -0.16
STRN4-222	ENST00000601869	CRP	P02741	224 aa		14.04	□□□□□ -0.16
STRN4-222	ENST00000601869	CCL19	Q99731	98 aa		14.04	□□□□□ -0.16
STRN4-222	ENST00000601869	PIMREG	Q9BSJ6	248 aa		14.03	□□□□□ -0.16
STRN4-222	ENST00000601869	VPS13C	Q709C8	3753 aa		14.03	□□□□□ -0.16
STRN4-222	ENST00000601869	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	14.02	□□□□□ -0.16
STRN4-222	ENST00000601869		Q9UF83	564 aa		14.02	□□□□□ -0.16
STRN4-222	ENST00000601869	ACACB	O00763	2458 aa		14.02	□□□□□ -0.16
STRN4-222	ENST00000601869	IGHV3-38	A0A0C4DH36	116 aa		14.02	□□□□□ -0.17
STRN4-222	ENST00000601869	LOC107984640	A0A0U1RRK4	108 aa		14.02	□□□□□ -0.17
STRN4-222	ENST00000601869	OBSCN-AS1	Q96MR7	158 aa		14.02	□□□□□ -0.17
STRN4-222	ENST00000601869	HTN1	P15515	57 aa		14.01	□□□□□ -0.17
STRN4-222	ENST00000601869	ABCA2	Q9BZC7	2435 aa		14.01	□□□□□ -0.17
STRN4-222	ENST00000601869	FLNC	Q14315	2725 aa		14.01	□□□□□ -0.17
STRN4-222	ENST00000601869	IGHV4-61	A0A0C4DH41	118 aa		14	□□□□□ -0.17
STRN4-222	ENST00000601869		H0YGX0	51 aa		14	□□□□□ -0.17
STRN4-222	ENST00000601869	KLK5	Q9Y337	293 aa	Predicted RBP	14	□□□□□ -0.17
STRN4-222	ENST00000601869	DOPEY1	Q5JWR5	2465 aa		14	□□□□□ -0.17
STRN4-222	ENST00000601869		A0A0U1RRA0	63 aa		14	□□□□□ -0.17
STRN4-222	ENST00000601869		F5H768	121 aa		14	□□□□□ -0.17
STRN4-222	ENST00000601869	SERP2	Q8N6R1	65 aa		14	□□□□□ -0.17
STRN4-222	ENST00000601869	C11orf72	Q8NBR9	251 aa		13.99	□□□□□ -0.17
STRN4-222	ENST00000601869	SYNJ2BP	P57105	145 aa		13.99	□□□□□ -0.17
STRN4-222	ENST00000601869	C10orf105	Q8TEF2	133 aa		13.99	□□□□□ -0.17
STRN4-222	ENST00000601869	USP9X	Q93008	2570 aa	Predicted RBP	13.98	□□□□□ -0.17
STRN4-222	ENST00000601869	hADV29S1	A0JD25	119 aa		13.98	□□□□□ -0.17
STRN4-222	ENST00000601869	ATP5J2	P56134	94 aa		13.96	□□□□□ -0.17
STRN4-222	ENST00000601869		Q9HAA7	133 aa		13.96	□□□□□ -0.17
STRN4-222	ENST00000601869	TRBV10-1	A0A0K0K1A3	114 aa		13.95	□□□□□ -0.18
STRN4-222	ENST00000601869	DEFB131A	P59861	70 aa		13.95	□□□□□ -0.18
STRN4-222	ENST00000601869	RBMY1B	A6NDE4	496 aa	Known RBP	13.95	□□□□□ -0.18
STRN4-222	ENST00000601869	RBMY1E	A6NEQ0	496 aa	Known RBP	13.95	□□□□□ -0.18
STRN4-222	ENST00000601869	RBMY1D	P0C7P1	496 aa	Known RBP	13.95	□□□□□ -0.18
STRN4-222	ENST00000601869	IGHV4-30-2	A0A087WSY4	118 aa		13.94	□□□□□ -0.18
STRN4-222	ENST00000601869	WIPF1	O43516	503 aa		13.94	□□□□□ -0.18
STRN4-222	ENST00000601869	UPK3B	Q9BT76	320 aa		13.94	□□□□□ -0.18
STRN4-222	ENST00000601869	ZFHX3	Q15911	3703 aa		13.94	□□□□□ -0.18
STRN4-222	ENST00000601869	CDC42SE2	Q9NRR3	84 aa		13.94	□□□□□ -0.18
STRN4-222	ENST00000601869	TRAV13-1	A0A0B4J241	112 aa		13.93	□□□□□ -0.18
STRN4-222	ENST00000601869	INS	P01308	110 aa		13.93	□□□□□ -0.18
STRN4-222	ENST00000601869	HOXD3	P31249	432 aa	Predicted RBP	13.93	□□□□□ -0.18
STRN4-222	ENST00000601869	LINC00337	Q8N6G1	96 aa		13.93	□□□□□ -0.18
STRN4-222	ENST00000601869	SPG11	Q96JI7	2443 aa		13.93	□□□□□ -0.18
STRN4-222	ENST00000601869	RPL36A	P83881	106 aa	Known RBP	13.92	□□□□□ -0.18
STRN4-222	ENST00000601869	RPL36AL	Q969Q0	106 aa	Known RBP	13.92	□□□□□ -0.18
STRN4-222	ENST00000601869	SND1-IT1	Q9HBX3	110 aa		13.92	□□□□□ -0.18
STRN4-222	ENST00000601869	MYO18B	Q8IUG5	2567 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	MSMB	P08118	114 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	S100A7L2	Q5SY68	101 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	DPH3	Q96FX2	82 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	UBE2E2	Q96LR5	201 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	C14orf132	Q9NPU4	83 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	CELSR1	Q9NYQ6	3014 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	IGKV2-28	A0A075B6P5	120 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	IGKV2D-28	P01615	120 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	USP24	Q9UPU5	2620 aa		13.91	□□□□□ -0.18
STRN4-222	ENST00000601869	SMIM11B	Q8TCY0	68 aa		13.9	□□□□□ -0.18
STRN4-222	ENST00000601869		A0A087WYN8	130 aa		13.9	□□□□□ -0.18
STRN4-222	ENST00000601869	ATP5EP2	Q5VTU8	51 aa		13.9	□□□□□ -0.18
STRN4-222	ENST00000601869	LINC00846	Q9NV44	126 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms