RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 Q6ZSN1 163 aa9.34□□□□□ -0.91
IRF3-225ENST00000600022 NEGR1Q7Z3B1 354 aa9.34□□□□□ -0.91
IRF3-225ENST00000600022 VPS13BQ7Z7G8 4022 aa9.34□□□□□ -0.92
IRF3-225ENST00000600022 DMBT1Q9UGM3 2413 aaPredicted RBP9.33□□□□□ -0.92
IRF3-225ENST00000600022 H0Y8G0 127 aa9.33□□□□□ -0.92
IRF3-225ENST00000600022 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.33□□□□□ -0.92
IRF3-225ENST00000600022 C2orf66Q6UXQ4 117 aa9.33□□□□□ -0.92
IRF3-225ENST00000600022 Q6ZN92 141 aa9.33□□□□□ -0.92
IRF3-225ENST00000600022 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
IRF3-225ENST00000600022 SLC25A29Q8N8R3 303 aa9.33□□□□□ -0.92
IRF3-225ENST00000600022 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
IRF3-225ENST00000600022 SCGB3A1Q96QR1 104 aa9.33□□□□□ -0.92
IRF3-225ENST00000600022 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
IRF3-225ENST00000600022 A0A096LNJ9 63 aa9.32□□□□□ -0.92
IRF3-225ENST00000600022 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
IRF3-225ENST00000600022 PRSS1P07477 247 aa9.32□□□□□ -0.92
IRF3-225ENST00000600022 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
IRF3-225ENST00000600022 FHL2Q14192 279 aa9.32□□□□□ -0.92
IRF3-225ENST00000600022 HHLA3Q9XRX5 114 aa9.32□□□□□ -0.92
IRF3-225ENST00000600022 H3BNG1 76 aa9.31□□□□□ -0.92
IRF3-225ENST00000600022 TSHBP01222 138 aa9.31□□□□□ -0.92
IRF3-225ENST00000600022 DNAH10OSP0CZ25 163 aa9.31□□□□□ -0.92
IRF3-225ENST00000600022 PRO0255Q9UI72 69 aa9.31□□□□□ -0.92
IRF3-225ENST00000600022 GAGE12JA6NER3 117 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 INAFM2P0DMQ5 153 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 KRTAP10-1P60331 282 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 GAGE1Q13065 139 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 GAGE4Q13068 117 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 GAGE5Q13069 117 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 GAGE13Q4V321 117 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 PAPPA-AS1Q5QFB9 102 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 LINC00173Q6ZV60 143 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 ERASQ7Z444 233 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 TMEM141Q96I45 108 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 VAMP8Q9BV40 100 aa9.3□□□□□ -0.92
IRF3-225ENST00000600022 SIVA1O15304 175 aa9.29□□□□□ -0.92
IRF3-225ENST00000600022 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
IRF3-225ENST00000600022 PAX4O43316 350 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 SMR3BP02814 79 aaPredicted RBP9.28□□□□□ -0.92
IRF3-225ENST00000600022 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 UBE2D3P61077 147 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 UBE2D2P62837 147 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 HAMPP81172 84 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 LINC01545Q5VT33 79 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 C20orf203Q8NBC4 194 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 TIMM17AQ99595 171 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
IRF3-225ENST00000600022 IGHV3-38A0A0C4DH36 116 aa9.27□□□□□ -0.93
IRF3-225ENST00000600022 CRYBA4P53673 196 aa9.27□□□□□ -0.93
IRF3-225ENST00000600022 TEX43Q6ZNM6 134 aa9.27□□□□□ -0.93
IRF3-225ENST00000600022 TSTD3H0UI37 97 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 UBE2L6O14933 153 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 NPSP0C0P6 89 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 GYPEP15421 78 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 Q5VSD8 79 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 SH2D6Q7Z4S9 175 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 DEFB104AQ8WTQ1 72 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 Q9UF83 564 aa9.26□□□□□ -0.93
IRF3-225ENST00000600022 A0A087WTM6 91 aa9.25□□□□□ -0.93
IRF3-225ENST00000600022 TRAV12-1A0A0B4J245 112 aa9.25□□□□□ -0.93
IRF3-225ENST00000600022 RPL39P62891 51 aaKnown RBP9.25□□□□□ -0.93
IRF3-225ENST00000600022 DGAT2L7PQ6IED9 249 aa9.25□□□□□ -0.93
IRF3-225ENST00000600022 Q8N976 141 aa9.25□□□□□ -0.93
IRF3-225ENST00000600022 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
IRF3-225ENST00000600022 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
IRF3-225ENST00000600022 TRAV9-2A0A087WT02 112 aa9.24□□□□□ -0.93
IRF3-225ENST00000600022 A0A087WX48 190 aa9.24□□□□□ -0.93
IRF3-225ENST00000600022 PLNP26678 52 aa9.24□□□□□ -0.93
IRF3-225ENST00000600022 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
IRF3-225ENST00000600022 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
IRF3-225ENST00000600022 PYGO1Q9Y3Y4 419 aa9.24□□□□□ -0.93
IRF3-225ENST00000600022 LOC100131303A0A0U1RQF7 123 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 DPM2O94777 84 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 PKIAP61925 76 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 PMVKQ15126 192 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 CDPF1Q6NVV7 123 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 BAALCQ8WXS3 180 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 PAM16Q9Y3D7 125 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
IRF3-225ENST00000600022 H7C423 109 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 ODF1Q14990 250 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
IRF3-225ENST00000600022 SPATA45Q537H7 98 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 AMMECR1LQ6DCA0 310 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 WFDC10BQ8IUB3 73 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 TMEM101Q96IK0 257 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 CHCHD7Q9BUK0 85 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 VCX2Q9H322 139 aa9.22□□□□□ -0.93
IRF3-225ENST00000600022 CHTOPQ9Y3Y2 248 aaKnown RBP9.22□□□□□ -0.93
IRF3-225ENST00000600022 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.21□□□□□ -0.94
IRF3-225ENST00000600022 IGKV2-29A2NJV5 120 aaPredicted RBP9.21□□□□□ -0.94
IRF3-225ENST00000600022 F8VRH5 84 aa9.21□□□□□ -0.94
IRF3-225ENST00000600022 IGKCP01834 107 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms