RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 G3V4G9 280 aa16.22■□□□□ 0.19
SRRM1-222ENST00000596378 TRAV4A0A0B4J268 109 aa16.21■□□□□ 0.19
SRRM1-222ENST00000596378 IGHV1-58A0A0C4DH39 117 aa16.21■□□□□ 0.19
SRRM1-222ENST00000596378 A4D1N5 150 aa16.21■□□□□ 0.19
SRRM1-222ENST00000596378 GAGE12JA6NER3 117 aa16.21■□□□□ 0.19
SRRM1-222ENST00000596378 GAGE4Q13068 117 aa16.21■□□□□ 0.19
SRRM1-222ENST00000596378 GAGE5Q13069 117 aa16.21■□□□□ 0.19
SRRM1-222ENST00000596378 GAGE13Q4V321 117 aa16.21■□□□□ 0.19
SRRM1-222ENST00000596378 EIF4EBP3O60516 100 aaPredicted RBP16.2■□□□□ 0.18
SRRM1-222ENST00000596378 PCP4P48539 62 aa16.2■□□□□ 0.18
SRRM1-222ENST00000596378 MUSTN1Q8IVN3 82 aa16.2■□□□□ 0.18
SRRM1-222ENST00000596378 GAGE7O76087 117 aa16.2■□□□□ 0.18
SRRM1-222ENST00000596378 GAGE12FP0CL80 117 aa16.2■□□□□ 0.18
SRRM1-222ENST00000596378 GAGE12GP0CL81 117 aa16.2■□□□□ 0.18
SRRM1-222ENST00000596378 GAGE12IP0CL82 117 aa16.2■□□□□ 0.18
SRRM1-222ENST00000596378 RPL36AP83881 106 aaKnown RBP16.2■□□□□ 0.18
SRRM1-222ENST00000596378 DGAT2L7PQ6IED9 249 aa16.2■□□□□ 0.18
SRRM1-222ENST00000596378 NTM-AS1Q6ZSK4 140 aa16.2■□□□□ 0.18
SRRM1-222ENST00000596378 RPL36ALQ969Q0 106 aaKnown RBP16.2■□□□□ 0.18
SRRM1-222ENST00000596378 F8W1H4 67 aa16.19■□□□□ 0.18
SRRM1-222ENST00000596378 NDUFA7O95182 113 aa16.19■□□□□ 0.18
SRRM1-222ENST00000596378 CMC4P56277 68 aaPredicted RBP16.19■□□□□ 0.18
SRRM1-222ENST00000596378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.19■□□□□ 0.18
SRRM1-222ENST00000596378 VSIG2Q96IQ7 327 aa16.19■□□□□ 0.18
SRRM1-222ENST00000596378 GEMIN7Q9H840 131 aaKnown RBP16.19■□□□□ 0.18
SRRM1-222ENST00000596378 PRO0461Q9UI25 63 aa16.19■□□□□ 0.18
SRRM1-222ENST00000596378 CSNK1G2-AS1Q8NCQ2 148 aa16.18■□□□□ 0.18
SRRM1-222ENST00000596378 CDKN2A-AS1Q9UH64 79 aa16.18■□□□□ 0.18
SRRM1-222ENST00000596378 NOTCH2Q04721 2471 aa16.18■□□□□ 0.18
SRRM1-222ENST00000596378 SH2D6Q7Z4S9 175 aa16.18■□□□□ 0.18
SRRM1-222ENST00000596378 DAZ2Q13117 558 aaKnown RBP16.17■□□□□ 0.18
SRRM1-222ENST00000596378 C16orf74Q96GX8 76 aa16.17■□□□□ 0.18
SRRM1-222ENST00000596378 NDUFA12Q9UI09 145 aa16.17■□□□□ 0.18
SRRM1-222ENST00000596378 TRGV2A0A075B6R0 118 aa16.17■□□□□ 0.18
SRRM1-222ENST00000596378 TMEM238C9JI98 176 aa16.17■□□□□ 0.18
SRRM1-222ENST00000596378 PSMB2P49721 201 aa16.17■□□□□ 0.18
SRRM1-222ENST00000596378 COX6A2Q02221 97 aa16.17■□□□□ 0.18
SRRM1-222ENST00000596378 LITAFQ99732 161 aa16.17■□□□□ 0.18
SRRM1-222ENST00000596378 OTOGQ6ZRI0 2925 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 TRBV10-1A0A0K0K1A3 114 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 LOC100131303A0A0U1RQF7 123 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 UBE2D3P61077 147 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 UBE2D2P62837 147 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 VWFP04275 2813 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 ETDBQ3ZM63 59 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 FAM110AQ9BQ89 295 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 PRO1854Q9UHT4 67 aa16.16■□□□□ 0.18
SRRM1-222ENST00000596378 LY6G6DO95868 133 aa16.15■□□□□ 0.18
SRRM1-222ENST00000596378 ADAMTSL4-AS1Q5T5F5 129 aa16.14■□□□□ 0.18
SRRM1-222ENST00000596378 DAZ4Q86SG3 579 aaKnown RBP16.13■□□□□ 0.17
SRRM1-222ENST00000596378 DAZ3Q9NR90 486 aaKnown RBP16.13■□□□□ 0.17
SRRM1-222ENST00000596378 H7C2G1 150 aa16.13■□□□□ 0.17
SRRM1-222ENST00000596378 FN1P02751 2386 aaKnown RBP16.12■□□□□ 0.17
SRRM1-222ENST00000596378 PF4P02776 101 aa16.12■□□□□ 0.17
SRRM1-222ENST00000596378 C1QTNF4Q9BXJ3 329 aa16.12■□□□□ 0.17
SRRM1-222ENST00000596378 NPC2P61916 151 aa16.12■□□□□ 0.17
SRRM1-222ENST00000596378 PRSS2P07478 247 aa16.11■□□□□ 0.17
SRRM1-222ENST00000596378 LINC00242Q5T6M2 205 aa16.11■□□□□ 0.17
SRRM1-222ENST00000596378 TRAV13-1A0A0B4J241 112 aa16.11■□□□□ 0.17
SRRM1-222ENST00000596378 TCL1BO95988 128 aa16.11■□□□□ 0.17
SRRM1-222ENST00000596378 SBSPONQ8IVN8 264 aa16.11■□□□□ 0.17
SRRM1-222ENST00000596378 TMEM101Q96IK0 257 aa16.11■□□□□ 0.17
SRRM1-222ENST00000596378 TIRAPP58753 221 aa16.1■□□□□ 0.17
SRRM1-222ENST00000596378 IGLV5-45A0A087WSX0 123 aa16.1■□□□□ 0.17
SRRM1-222ENST00000596378 SMCPP49901 116 aaPredicted RBP16.1■□□□□ 0.17
SRRM1-222ENST00000596378 ZFAND6Q6FIF0 208 aa16.1■□□□□ 0.17
SRRM1-222ENST00000596378 SPATA3Q8NHX4 192 aa16.1■□□□□ 0.17
SRRM1-222ENST00000596378 IGHV3-33P01772 117 aa16.08■□□□□ 0.17
SRRM1-222ENST00000596378 LINC00482Q8N8I6 264 aa16.08■□□□□ 0.17
SRRM1-222ENST00000596378 OVOL2Q9BRP0 275 aa16.08■□□□□ 0.17
SRRM1-222ENST00000596378 A0A0B4J2C4 111 aa16.07■□□□□ 0.16
SRRM1-222ENST00000596378 TRGV4A0A0C4DH28 118 aa16.07■□□□□ 0.16
SRRM1-222ENST00000596378 SCGB1C2P0DMR2 95 aa16.07■□□□□ 0.16
SRRM1-222ENST00000596378 DAND5Q8N907 189 aa16.07■□□□□ 0.16
SRRM1-222ENST00000596378 NBEAL2Q6ZNJ1 2754 aa16.07■□□□□ 0.16
SRRM1-222ENST00000596378 CDC42SE2Q9NRR3 84 aa16.06■□□□□ 0.16
SRRM1-222ENST00000596378 INSL3P51460 131 aa16.06■□□□□ 0.16
SRRM1-222ENST00000596378 HERVK_113P63121 156 aa16.06■□□□□ 0.16
SRRM1-222ENST00000596378 ERG28Q9UKR5 140 aa16.05■□□□□ 0.16
SRRM1-222ENST00000596378 CSDC2Q9Y534 153 aaKnown RBP16.05■□□□□ 0.16
SRRM1-222ENST00000596378 TENM1Q9UKZ4 2725 aa16.05■□□□□ 0.16
SRRM1-222ENST00000596378 INAFM1C9JVW0 142 aa16.05■□□□□ 0.16
SRRM1-222ENST00000596378 LYRM7Q5U5X0 104 aa16.05■□□□□ 0.16
SRRM1-222ENST00000596378 SPANXDQ9BXN6 97 aa16.05■□□□□ 0.16
SRRM1-222ENST00000596378 SPANXCQ9NY87 97 aa16.05■□□□□ 0.16
SRRM1-222ENST00000596378 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.04■□□□□ 0.16
SRRM1-222ENST00000596378 TRBV6-4A0A1B0GX49 114 aa16.04■□□□□ 0.16
SRRM1-222ENST00000596378 MIAQ16674 131 aa16.04■□□□□ 0.16
SRRM1-222ENST00000596378 TMEM243Q9BU79 118 aa16.04■□□□□ 0.16
SRRM1-222ENST00000596378 NSD1Q96L73 2696 aaPredicted RBP16.04■□□□□ 0.16
SRRM1-222ENST00000596378 UBE2L6O14933 153 aa16.03■□□□□ 0.16
SRRM1-222ENST00000596378 FHL2Q14192 279 aa16.03■□□□□ 0.16
SRRM1-222ENST00000596378 CRLF1O75462 422 aa16.03■□□□□ 0.16
SRRM1-222ENST00000596378 Q1RN00 199 aa16.03■□□□□ 0.16
SRRM1-222ENST00000596378 ZNF625Q96I27 306 aaPredicted RBP16.03■□□□□ 0.16
SRRM1-222ENST00000596378 DEFB130BP0DP73 79 aa16.02■□□□□ 0.16
SRRM1-222ENST00000596378 DEFB130AP0DP74 79 aa16.02■□□□□ 0.16
SRRM1-222ENST00000596378 NDUFA1O15239 70 aa16.02■□□□□ 0.15
SRRM1-222ENST00000596378 GTSF1LQ9H1H1 148 aa16.02■□□□□ 0.15
SRRM1-222ENST00000596378 IGLV5-39A0A0G2JS06 123 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms