RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 ENHOQ6UWT2 76 aa9.21□□□□□ -0.94
LIG1-207ENST00000594759 TRBV27A0A0K0K1C4 114 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 WIPF1O43516 503 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 PRB1P04280 392 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 Q6JHZ5 121 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 SERP1Q9Y6X1 66 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 MINOS1-NBL1R4GNA1 71 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 SAA4P35542 130 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 IGHV4OR15-8A0A075B7B6 117 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 A0A087WW49 117 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 C6orf226Q5I0X4 101 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 NPBQ8NG41 125 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 UPK3BQ9BT76 320 aa9.2□□□□□ -0.94
LIG1-207ENST00000594759 OVOL3O00110 214 aa9.19□□□□□ -0.94
LIG1-207ENST00000594759 MYO15AQ9UKN7 3530 aa9.19□□□□□ -0.94
LIG1-207ENST00000594759 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
LIG1-207ENST00000594759 ADAMTSL4-AS1Q5T5F5 129 aa9.19□□□□□ -0.94
LIG1-207ENST00000594759 PSMG3-AS1Q96PY0 264 aa9.19□□□□□ -0.94
LIG1-207ENST00000594759 ZNF580Q9UK33 172 aa9.19□□□□□ -0.94
LIG1-207ENST00000594759 DSPP15924 2871 aaKnown RBP9.19□□□□□ -0.94
LIG1-207ENST00000594759 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
LIG1-207ENST00000594759 FN1P02751 2386 aaKnown RBP9.18□□□□□ -0.94
LIG1-207ENST00000594759 JMJD7-PLA2G4BH0Y9G9 81 aa9.18□□□□□ -0.94
LIG1-207ENST00000594759 ADORA2A-AS1P86434 159 aa9.18□□□□□ -0.94
LIG1-207ENST00000594759 IGHV7-81A0A0B4J1V7 117 aa9.18□□□□□ -0.94
LIG1-207ENST00000594759 NCR3O14931 201 aa9.18□□□□□ -0.94
LIG1-207ENST00000594759 C11orf44Q8N8P7 122 aa9.18□□□□□ -0.94
LIG1-207ENST00000594759 SPTBN5Q9NRC6 3674 aaKnown RBP9.18□□□□□ -0.94
LIG1-207ENST00000594759 ACANP16112 2415 aa9.18□□□□□ -0.94
LIG1-207ENST00000594759 H3BUX3 64 aa9.18□□□□□ -0.94
LIG1-207ENST00000594759 POM121L12Q8N7R1 296 aa9.18□□□□□ -0.94
LIG1-207ENST00000594759 TIMM17BO60830 172 aa9.17□□□□□ -0.94
LIG1-207ENST00000594759 PRR9Q5T870 116 aa9.17□□□□□ -0.94
LIG1-207ENST00000594759 ZFAND2AQ8N6M9 145 aa9.17□□□□□ -0.94
LIG1-207ENST00000594759 SNURFQ9Y675 71 aa9.17□□□□□ -0.94
LIG1-207ENST00000594759 TSHBP01222 138 aa9.17□□□□□ -0.94
LIG1-207ENST00000594759 PF4P02776 101 aa9.17□□□□□ -0.94
LIG1-207ENST00000594759 FAM223BA6NKX1 122 aa9.17□□□□□ -0.94
LIG1-207ENST00000594759 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
LIG1-207ENST00000594759 GPHB5Q86YW7 130 aa9.16□□□□□ -0.94
LIG1-207ENST00000594759 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
LIG1-207ENST00000594759 NDUFA4O00483 81 aa9.16□□□□□ -0.94
LIG1-207ENST00000594759 WFDC9Q8NEX5 89 aa9.16□□□□□ -0.94
LIG1-207ENST00000594759 RNASE3P12724 160 aaKnown RBP9.15□□□□□ -0.94
LIG1-207ENST00000594759 ATP5EP2Q5VTU8 51 aa9.15□□□□□ -0.94
LIG1-207ENST00000594759 DYNLRB2Q8TF09 96 aa9.15□□□□□ -0.95
LIG1-207ENST00000594759 TRBV12-3P01733 135 aa9.14□□□□□ -0.95
LIG1-207ENST00000594759 SLPIP03973 132 aa9.14□□□□□ -0.95
LIG1-207ENST00000594759 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
LIG1-207ENST00000594759 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
LIG1-207ENST00000594759 MIR7-3HGQ8N6C7 128 aa9.14□□□□□ -0.95
LIG1-207ENST00000594759 TRBV6-5A0A0K0K1A5 114 aa9.14□□□□□ -0.95
LIG1-207ENST00000594759 M0QY20 66 aa9.14□□□□□ -0.95
LIG1-207ENST00000594759 NDUFA1O15239 70 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 XCL1P47992 114 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 FAM222AQ5U5X8 452 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 XCL2Q9UBD3 114 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 NBEAQ8NFP9 2946 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 U3KQE9 123 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 BOD1L1Q8NFC6 3051 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 IGHV3-53P01767 116 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 MRGPRG-AS1Q2M3A8 158 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 USMG5Q96IX5 58 aa9.13□□□□□ -0.95
LIG1-207ENST00000594759 ITLN2Q8WWU7 325 aaPredicted RBP9.12□□□□□ -0.95
LIG1-207ENST00000594759 A0A1W2PRX2 142 aa9.12□□□□□ -0.95
LIG1-207ENST00000594759 MRPS36P82909 103 aaKnown RBP9.12□□□□□ -0.95
LIG1-207ENST00000594759 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
LIG1-207ENST00000594759 LINC00846Q9NV44 126 aa9.12□□□□□ -0.95
LIG1-207ENST00000594759 F8WEM9 126 aa9.12□□□□□ -0.95
LIG1-207ENST00000594759 DOPEY1Q5JWR5 2465 aa9.11□□□□□ -0.95
LIG1-207ENST00000594759 RNF223E7ERA6 249 aa9.11□□□□□ -0.95
LIG1-207ENST00000594759 DEFB121Q5J5C9 76 aa9.11□□□□□ -0.95
LIG1-207ENST00000594759 C5orf38Q86SI9 138 aa9.11□□□□□ -0.95
LIG1-207ENST00000594759 SMCR5Q8TEV8 140 aa9.11□□□□□ -0.95
LIG1-207ENST00000594759 DCANP1Q8TF63 244 aa9.11□□□□□ -0.95
LIG1-207ENST00000594759 FLNBO75369 2602 aaKnown RBP9.11□□□□□ -0.95
LIG1-207ENST00000594759 TRGV1A0A0A0MS02 117 aa9.11□□□□□ -0.95
LIG1-207ENST00000594759 B4DSR2 109 aa9.1□□□□□ -0.95
LIG1-207ENST00000594759 DAD1P61803 113 aa9.1□□□□□ -0.95
LIG1-207ENST00000594759 TRGV2A0A075B6R0 118 aa9.1□□□□□ -0.95
LIG1-207ENST00000594759 TMEM256-PLSCR3K7ERE1 68 aa9.1□□□□□ -0.95
LIG1-207ENST00000594759 BLCAPP62952 87 aa9.1□□□□□ -0.95
LIG1-207ENST00000594759 Q8N9W7 124 aa9.1□□□□□ -0.95
LIG1-207ENST00000594759 CLPSL1A2RUU4 121 aa9.09□□□□□ -0.95
LIG1-207ENST00000594759 CDSNQ15517 529 aa9.09□□□□□ -0.95
LIG1-207ENST00000594759 COX7B2Q8TF08 81 aa9.09□□□□□ -0.95
LIG1-207ENST00000594759 CCDC140Q96MF4 163 aa9.09□□□□□ -0.95
LIG1-207ENST00000594759 PRORYQ9H606 182 aa9.08□□□□□ -0.96
LIG1-207ENST00000594759 NDUFC1O43677 76 aa9.08□□□□□ -0.96
LIG1-207ENST00000594759 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
LIG1-207ENST00000594759 UNQ9165/PRO28630Q6UXU0 137 aa9.08□□□□□ -0.96
LIG1-207ENST00000594759 SOSTDC1Q6X4U4 206 aa9.08□□□□□ -0.96
LIG1-207ENST00000594759 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
LIG1-207ENST00000594759 F8WDY8 70 aa9.07□□□□□ -0.96
LIG1-207ENST00000594759 HILS1P60008 231 aa9.07□□□□□ -0.96
LIG1-207ENST00000594759 MSMBP08118 114 aa9.07□□□□□ -0.96
LIG1-207ENST00000594759 ZFP36P26651 326 aaKnown RBP9.07□□□□□ -0.96
LIG1-207ENST00000594759 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
LIG1-207ENST00000594759 FRYQ5TBA9 3013 aa9.07□□□□□ -0.96
LIG1-207ENST00000594759 TRAV7A0A075B6U4 112 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms