RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 TECTAO75443 2155 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 ANKHD1Q8IWZ3 2542 aaKnown RBP2.64□□□□□ -1.99
VMP1-216ENST00000592790 FASNP49327 2511 aaKnown RBP2.64□□□□□ -1.99
VMP1-216ENST00000592790 USP9XQ93008 2570 aaPredicted RBP2.64□□□□□ -1.99
VMP1-216ENST00000592790 TRAV4A0A0B4J268 109 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 TRIAP1O43715 76 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 TSHBP01222 138 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 C6orf226Q5I0X4 101 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 TMEM61Q8N0U2 210 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 ZNRF2Q8NHG8 242 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 PRORYQ9H606 182 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 ORMDL1Q9P0S3 153 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 FAM236AA0A1B0GUQ0 79 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 FAM236BA0A1B0GV22 79 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 A0A1W2PRX2 142 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 GAS8-AS1O95177 125 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 HOXD3P31249 432 aaPredicted RBP2.64□□□□□ -1.99
VMP1-216ENST00000592790 C10orf105Q8TEF2 133 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 WNK2Q9Y3S1 2297 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 K7EQD1 137 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 RPS28P62857 69 aaKnown RBP2.64□□□□□ -1.99
VMP1-216ENST00000592790 PRR9Q5T870 116 aa2.64□□□□□ -1.99
VMP1-216ENST00000592790 TEX49A0A1B0GTD5 131 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 IGLV1-40P01703 118 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 IGHV3-53P01767 116 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 A0A1B0GX51 115 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 PDE6GP18545 87 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 INSL3P51460 131 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 C3orf22Q8N5N4 141 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 C16orf74Q96GX8 76 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 FAM19A4Q96LR4 140 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 AMELXQ99217 191 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 PKDREJQ9NTG1 2253 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.63□□□□□ -1.99
VMP1-216ENST00000592790 A0A0U1RRA0 63 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 IGKV2-29A2NJV5 120 aaPredicted RBP2.63□□□□□ -1.99
VMP1-216ENST00000592790 CRYGDP07320 174 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 HIST1H4AP62805 103 aaKnown RBP2.63□□□□□ -1.99
VMP1-216ENST00000592790 COX7B2Q8TF08 81 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 SND1-IT1Q9HBX3 110 aa2.63□□□□□ -1.99
VMP1-216ENST00000592790 IGKV3OR2-268A0A0C4DH90 116 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 hADV29S1A0JD25 119 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 KNCNA6PVL3 124 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 LINC00308Q8TCZ7 52 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 CLEC2BQ92478 149 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 LINC00467Q9BRT7 94 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 KIF25-AS1Q9Y6Z4 181 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 ABCA1O95477 2261 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 TRBV7-7A0A0K0K1E9 115 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 J3QKU1 62 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 RS1O15537 224 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 TRBV12-3P01733 135 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 Q6ZS46 218 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 DCANP1Q8TF63 244 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 PPDPFQ9H3Y8 114 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 JPT2Q9H910 190 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 IGHV4-61A0A0C4DH41 118 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 BLCAPP62952 87 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 LCE2AQ5TA79 106 aaPredicted RBP2.62□□□□□ -1.99
VMP1-216ENST00000592790 DEFB104AQ8WTQ1 72 aa2.62□□□□□ -1.99
VMP1-216ENST00000592790 ZNF625Q96I27 306 aaPredicted RBP2.62□□□□□ -1.99
VMP1-216ENST00000592790 LINC01548A6NM66 108 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 IBA57-AS1B1ANH7 110 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 TMEM256-PLSCR3K7ERE1 68 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 SPRY2O43597 315 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 IGHV4-38-2P0DP08 117 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 MUC7Q8TAX7 377 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 C4orf3Q8WVX3 66 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 C11orf68Q9H3H3 251 aaKnown RBP2.61□□□□□ -1.99
VMP1-216ENST00000592790 UBE2D4Q9Y2X8 147 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 PLXNB1O43157 2135 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 IGHV3-38A0A0C4DH36 116 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 PSMB8P28062 276 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 TMEM258P61165 79 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 RBMY1FQ15415 496 aaKnown RBP2.61□□□□□ -1.99
VMP1-216ENST00000592790 ROS1P08922 2347 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 SMIM9A6NGZ8 99 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 NDUFA7O95182 113 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 RNASE1P07998 156 aaKnown RBP2.61□□□□□ -1.99
VMP1-216ENST00000592790 GNLYP22749 145 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 DEFB112Q30KQ8 113 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 KIR2DL5BQ8NHK3 375 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 OPRPNQ99935 248 aaPredicted RBP2.61□□□□□ -1.99
VMP1-216ENST00000592790 XCL2Q9UBD3 114 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 CDKN2A-AS1Q9UH64 79 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 LAMTOR3Q9UHA4 124 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 IGHV4-59P01825 116 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 COX7CP15954 63 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 SMCPP49901 116 aaPredicted RBP2.61□□□□□ -1.99
VMP1-216ENST00000592790 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 RNASE13Q5GAN3 156 aaKnown RBP2.61□□□□□ -1.99
VMP1-216ENST00000592790 LINC01600Q96MT4 127 aa2.61□□□□□ -1.99
VMP1-216ENST00000592790 Q6JHZ5 121 aa2.6□□□□□ -1.99
VMP1-216ENST00000592790 DSCR8Q96T75 97 aa2.6□□□□□ -1.99
VMP1-216ENST00000592790 BDP1A6H8Y1 2624 aa2.6□□□□□ -1.99
VMP1-216ENST00000592790 ARFGEF3Q5TH69 2177 aa2.6□□□□□ -1.99
VMP1-216ENST00000592790 NDUFC2O95298 119 aa2.6□□□□□ -1.99
VMP1-216ENST00000592790 LINC00315P59091 139 aa2.6□□□□□ -1.99
VMP1-216ENST00000592790 SEC61GP60059 68 aa2.6□□□□□ -1.99
VMP1-216ENST00000592790 DEFB121Q5J5C9 76 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms