RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 ORMDL2Q53FV1 153 aa13.82□□□□□ -0.2
DNMT1-227ENST00000592342 ZNF664Q8N3J9 261 aa13.81□□□□□ -0.2
DNMT1-227ENST00000592342 CSDC2Q9Y534 153 aaKnown RBP13.81□□□□□ -0.2
DNMT1-227ENST00000592342 TIMM21Q9BVV7 248 aa13.8□□□□□ -0.2
DNMT1-227ENST00000592342 CDC42SE2Q9NRR3 84 aa13.8□□□□□ -0.2
DNMT1-227ENST00000592342 BAALCQ8WXS3 180 aa13.79□□□□□ -0.2
DNMT1-227ENST00000592342 SPANXA1Q9NS26 97 aa13.79□□□□□ -0.2
DNMT1-227ENST00000592342 LRCOL1A6NCL2 159 aa13.78□□□□□ -0.2
DNMT1-227ENST00000592342 G0S2P27469 103 aa13.78□□□□□ -0.2
DNMT1-227ENST00000592342 FA2HQ7L5A8 372 aa13.78□□□□□ -0.2
DNMT1-227ENST00000592342 SPATA12Q7Z6I5 190 aa13.78□□□□□ -0.2
DNMT1-227ENST00000592342 CYSLTR1Q9Y271 337 aa13.78□□□□□ -0.2
DNMT1-227ENST00000592342 LECT2O14960 151 aa13.77□□□□□ -0.21
DNMT1-227ENST00000592342 C2orf66Q6UXQ4 117 aa13.77□□□□□ -0.21
DNMT1-227ENST00000592342 MAPKAPK5-AS1Q8N8E1 139 aa13.77□□□□□ -0.21
DNMT1-227ENST00000592342 SS18Q15532 418 aa13.76□□□□□ -0.21
DNMT1-227ENST00000592342 RNASE13Q5GAN3 156 aaKnown RBP13.76□□□□□ -0.21
DNMT1-227ENST00000592342 Q6ZUT4 128 aa13.76□□□□□ -0.21
DNMT1-227ENST00000592342 DNAH17Q9UFH2 4485 aa13.74□□□□□ -0.21
DNMT1-227ENST00000592342 LINC00959A0A1B0GUT2 108 aa13.74□□□□□ -0.21
DNMT1-227ENST00000592342 SCO1O75880 301 aa13.74□□□□□ -0.21
DNMT1-227ENST00000592342 Q8N814 137 aa13.74□□□□□ -0.21
DNMT1-227ENST00000592342 C18orf32Q8TCD1 76 aa13.74□□□□□ -0.21
DNMT1-227ENST00000592342 CHCHD10Q8WYQ3 142 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-227ENST00000592342 FRAS1Q86XX4 4008 aa13.74□□□□□ -0.21
DNMT1-227ENST00000592342 GAGE12HA6NDE8 117 aa13.73□□□□□ -0.21
DNMT1-227ENST00000592342 KRTAP10-2P60368 255 aa13.73□□□□□ -0.21
DNMT1-227ENST00000592342 WFDC2Q14508 124 aa13.73□□□□□ -0.21
DNMT1-227ENST00000592342 PGPEP1Q9NXJ5 209 aa13.73□□□□□ -0.21
DNMT1-227ENST00000592342 PYGO1Q9Y3Y4 419 aa13.73□□□□□ -0.21
DNMT1-227ENST00000592342 MRPS36P82909 103 aaKnown RBP13.72□□□□□ -0.21
DNMT1-227ENST00000592342 KRTAP26-1Q6PEX3 210 aa13.72□□□□□ -0.21
DNMT1-227ENST00000592342 OPRPNQ99935 248 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-227ENST00000592342 TRAV13-1A0A0B4J241 112 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 COLCA2A8K830 154 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 C16orf90A8MZG2 172 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 CCL25O15444 150 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 TRGC2P03986 189 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 XCL1P47992 114 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 RAB5BP61020 215 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 C14orf177Q52M58 125 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 AP5S1Q9NUS5 200 aa13.71□□□□□ -0.21
DNMT1-227ENST00000592342 LINC01546A6NGU7 62 aa13.7□□□□□ -0.22
DNMT1-227ENST00000592342 C1orf196B1AJZ1 125 aa13.7□□□□□ -0.22
DNMT1-227ENST00000592342 USP17L23D6RBM5 183 aa13.7□□□□□ -0.22
DNMT1-227ENST00000592342 LINC00614P0C842 121 aa13.7□□□□□ -0.22
DNMT1-227ENST00000592342 S100A1P23297 94 aa13.7□□□□□ -0.22
DNMT1-227ENST00000592342 Q6ZN92 141 aa13.7□□□□□ -0.22
DNMT1-227ENST00000592342 TMEM141Q96I45 108 aa13.7□□□□□ -0.22
DNMT1-227ENST00000592342 FAT2Q9NYQ8 4349 aa13.7□□□□□ -0.22
DNMT1-227ENST00000592342 CDPF1Q6NVV7 123 aa13.69□□□□□ -0.22
DNMT1-227ENST00000592342 TOMM6Q96B49 74 aa13.69□□□□□ -0.22
DNMT1-227ENST00000592342 EPPK1P58107 5090 aaKnown RBP13.69□□□□□ -0.22
DNMT1-227ENST00000592342 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-227ENST00000592342 IGLV4-3A0A075B6K6 122 aa13.68□□□□□ -0.22
DNMT1-227ENST00000592342 IGLV5-52A0A0A0MRZ9 124 aa13.68□□□□□ -0.22
DNMT1-227ENST00000592342 LINC01549A6NIU2 74 aa13.68□□□□□ -0.22
DNMT1-227ENST00000592342 IFITM10A6NMD0 228 aa13.68□□□□□ -0.22
DNMT1-227ENST00000592342 FUSP35637 526 aaKnown RBP eCLIP13.68□□□□□ -0.22
DNMT1-227ENST00000592342 TEX43Q6ZNM6 134 aa13.68□□□□□ -0.22
DNMT1-227ENST00000592342 NTN5Q8WTR8 489 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-227ENST00000592342 ATP6V1G1O75348 118 aa13.67□□□□□ -0.22
DNMT1-227ENST00000592342 FAM104AQ969W3 186 aa13.67□□□□□ -0.22
DNMT1-227ENST00000592342 SCGB3A1Q96QR1 104 aa13.67□□□□□ -0.22
DNMT1-227ENST00000592342 NPSP0C0P6 89 aa13.66□□□□□ -0.22
DNMT1-227ENST00000592342 PAPPA-AS1Q5QFB9 102 aa13.66□□□□□ -0.22
DNMT1-227ENST00000592342 CD164L2Q6UWJ8 174 aa13.66□□□□□ -0.22
DNMT1-227ENST00000592342 C2orf88Q9BSF0 95 aa13.66□□□□□ -0.22
DNMT1-227ENST00000592342 VCX2Q9H322 139 aa13.66□□□□□ -0.22
DNMT1-227ENST00000592342 IGIPA6NJ69 53 aa13.65□□□□□ -0.22
DNMT1-227ENST00000592342 FOXI1Q12951 378 aa13.65□□□□□ -0.22
DNMT1-227ENST00000592342 CFAP161Q6P656 301 aa13.65□□□□□ -0.22
DNMT1-227ENST00000592342 URB1-AS1Q96HZ7 61 aa13.65□□□□□ -0.22
DNMT1-227ENST00000592342 TIMM17AQ99595 171 aa13.65□□□□□ -0.22
DNMT1-227ENST00000592342 ERASQ7Z444 233 aa13.64□□□□□ -0.23
DNMT1-227ENST00000592342 BAGE3Q86Y29 109 aa13.64□□□□□ -0.23
DNMT1-227ENST00000592342 HBDP02042 147 aa13.62□□□□□ -0.23
DNMT1-227ENST00000592342 MALP21145 153 aa13.62□□□□□ -0.23
DNMT1-227ENST00000592342 CHCHD1Q96BP2 118 aaKnown RBP13.62□□□□□ -0.23
DNMT1-227ENST00000592342 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
DNMT1-227ENST00000592342 PRSS1P07477 247 aa13.61□□□□□ -0.23
DNMT1-227ENST00000592342 PMCHL1Q16048 86 aa13.61□□□□□ -0.23
DNMT1-227ENST00000592342 COX7A2LO14548 114 aa13.6□□□□□ -0.23
DNMT1-227ENST00000592342 GCSHP23434 173 aa13.6□□□□□ -0.23
DNMT1-227ENST00000592342 AMELXQ99217 191 aa13.6□□□□□ -0.23
DNMT1-227ENST00000592342 ZC2HC1BQ5TFG8 222 aa13.59□□□□□ -0.23
DNMT1-227ENST00000592342 IGHV1-58A0A0C4DH39 117 aa13.58□□□□□ -0.24
DNMT1-227ENST00000592342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-227ENST00000592342 HSBP1O75506 76 aa13.58□□□□□ -0.24
DNMT1-227ENST00000592342 HIGD2BQ4VC39 106 aa13.58□□□□□ -0.24
DNMT1-227ENST00000592342 LINC00173Q6ZV60 143 aa13.58□□□□□ -0.24
DNMT1-227ENST00000592342 C5orf38Q86SI9 138 aa13.58□□□□□ -0.24
DNMT1-227ENST00000592342 C15orf56Q8N910 161 aa13.58□□□□□ -0.24
DNMT1-227ENST00000592342 A0A096LNJ9 63 aa13.57□□□□□ -0.24
DNMT1-227ENST00000592342 UBE2D1P51668 147 aa13.57□□□□□ -0.24
DNMT1-227ENST00000592342 PKD1P98161 4303 aa13.57□□□□□ -0.24
DNMT1-227ENST00000592342 APOMO95445 188 aa13.56□□□□□ -0.24
DNMT1-227ENST00000592342 LINC00242Q5T6M2 205 aa13.56□□□□□ -0.24
DNMT1-227ENST00000592342 HECTD4Q9Y4D8 3996 aa13.56□□□□□ -0.24
DNMT1-227ENST00000592342 GVQW2A0A096LPI5 108 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms