RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MT-ND4LP03901 98 aa11.77□□□□□ -0.53
DDX39A-212ENST00000590260 OR5A1Q8NGJ0 315 aa11.77□□□□□ -0.53
DDX39A-212ENST00000590260 CHCHD10Q8WYQ3 142 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-212ENST00000590260 FAM104AQ969W3 186 aa11.77□□□□□ -0.53
DDX39A-212ENST00000590260 EPM2AB3EWF7 344 aa11.76□□□□□ -0.53
DDX39A-212ENST00000590260 F8W036 122 aa11.76□□□□□ -0.53
DDX39A-212ENST00000590260 S100A8P05109 93 aa11.76□□□□□ -0.53
DDX39A-212ENST00000590260 FOXI1Q12951 378 aa11.76□□□□□ -0.53
DDX39A-212ENST00000590260 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
DDX39A-212ENST00000590260 SMIM2Q9BVW6 85 aa11.76□□□□□ -0.53
DDX39A-212ENST00000590260 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
DDX39A-212ENST00000590260 LINC00959A0A1B0GUT2 108 aa11.75□□□□□ -0.53
DDX39A-212ENST00000590260 C9orf163Q8N9P6 203 aa11.75□□□□□ -0.53
DDX39A-212ENST00000590260 PANO1I0J062 215 aa11.74□□□□□ -0.53
DDX39A-212ENST00000590260 FCER1GP30273 86 aa11.74□□□□□ -0.53
DDX39A-212ENST00000590260 DGAT2L7PQ6IED9 249 aa11.74□□□□□ -0.53
DDX39A-212ENST00000590260 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
DDX39A-212ENST00000590260 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
DDX39A-212ENST00000590260 KIR2DL4Q99706 377 aa11.74□□□□□ -0.53
DDX39A-212ENST00000590260 CNBPP62633 177 aaKnown RBP11.73□□□□□ -0.53
DDX39A-212ENST00000590260 RPL39P62891 51 aaKnown RBP11.73□□□□□ -0.53
DDX39A-212ENST00000590260 RNASE13Q5GAN3 156 aaKnown RBP11.73□□□□□ -0.53
DDX39A-212ENST00000590260 CLRN3Q8NCR9 226 aa11.73□□□□□ -0.53
DDX39A-212ENST00000590260 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
DDX39A-212ENST00000590260 BTF3L4Q96K17 158 aa11.73□□□□□ -0.53
DDX39A-212ENST00000590260 hDV102S1A0JD36 115 aa11.72□□□□□ -0.53
DDX39A-212ENST00000590260 PHOX2AO14813 284 aa11.72□□□□□ -0.53
DDX39A-212ENST00000590260 CCL25O15444 150 aa11.72□□□□□ -0.53
DDX39A-212ENST00000590260 PPBPP02775 128 aa11.72□□□□□ -0.53
DDX39A-212ENST00000590260 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
DDX39A-212ENST00000590260 ORMDL3Q8N138 153 aa11.72□□□□□ -0.53
DDX39A-212ENST00000590260 SEC11CQ9BY50 192 aa11.72□□□□□ -0.53
DDX39A-212ENST00000590260 CSDC2Q9Y534 153 aaKnown RBP11.72□□□□□ -0.53
DDX39A-212ENST00000590260 TCAPO15273 167 aa11.71□□□□□ -0.53
DDX39A-212ENST00000590260 C10orf91Q5T1B1 145 aa11.71□□□□□ -0.53
DDX39A-212ENST00000590260 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.53
DDX39A-212ENST00000590260 Q6ZUT4 128 aa11.71□□□□□ -0.53
DDX39A-212ENST00000590260 CIRBP-AS1Q8TBR5 109 aa11.71□□□□□ -0.53
DDX39A-212ENST00000590260 PRELID3AQ96N28 172 aa11.71□□□□□ -0.53
DDX39A-212ENST00000590260 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
DDX39A-212ENST00000590260 PRSS47A8MTI9 375 aa11.7□□□□□ -0.54
DDX39A-212ENST00000590260 XCL1P47992 114 aa11.7□□□□□ -0.54
DDX39A-212ENST00000590260 TIMM21Q9BVV7 248 aa11.7□□□□□ -0.54
DDX39A-212ENST00000590260 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-212ENST00000590260 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
DDX39A-212ENST00000590260 IMMP2LQ96T52 175 aa11.69□□□□□ -0.54
DDX39A-212ENST00000590260 OPRPNQ99935 248 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-212ENST00000590260 SRRM2Q9UQ35 2752 aaKnown RBP11.68□□□□□ -0.54
DDX39A-212ENST00000590260 GVQW2A0A096LPI5 108 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-212ENST00000590260 KRTAP10-4P60372 401 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-212ENST00000590260 CTDSP1Q9GZU7 261 aa11.67□□□□□ -0.54
DDX39A-212ENST00000590260 LINC00528Q8N1L1 170 aa11.66□□□□□ -0.54
DDX39A-212ENST00000590260 CARHSP1Q9Y2V2 147 aaKnown RBP11.66□□□□□ -0.54
DDX39A-212ENST00000590260 LOC389332A0A1B0GUA5 103 aa11.65□□□□□ -0.54
DDX39A-212ENST00000590260 SS18Q15532 418 aa11.65□□□□□ -0.54
DDX39A-212ENST00000590260 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
DDX39A-212ENST00000590260 LINC00526Q96FQ7 95 aa11.65□□□□□ -0.54
DDX39A-212ENST00000590260 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
DDX39A-212ENST00000590260 INAFM2P0DMQ5 153 aa11.64□□□□□ -0.55
DDX39A-212ENST00000590260 CIRBPQ14011 172 aaKnown RBP11.64□□□□□ -0.55
DDX39A-212ENST00000590260 LAMTOR2Q9Y2Q5 125 aa11.64□□□□□ -0.55
DDX39A-212ENST00000590260 MYCBP2O75592 4640 aa11.63□□□□□ -0.55
DDX39A-212ENST00000590260 CHTF8P0CG12 524 aa11.63□□□□□ -0.55
DDX39A-212ENST00000590260 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
DDX39A-212ENST00000590260 TMEM18Q96B42 140 aa11.63□□□□□ -0.55
DDX39A-212ENST00000590260 SPANXA1Q9NS26 97 aa11.63□□□□□ -0.55
DDX39A-212ENST00000590260 AP5S1Q9NUS5 200 aa11.63□□□□□ -0.55
DDX39A-212ENST00000590260 TRAV13-1A0A0B4J241 112 aa11.62□□□□□ -0.55
DDX39A-212ENST00000590260 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
DDX39A-212ENST00000590260 KIAA1644Q3SXP7 199 aa11.62□□□□□ -0.55
DDX39A-212ENST00000590260 Q8N8P6 123 aa11.62□□□□□ -0.55
DDX39A-212ENST00000590260 MAP1LC3AQ9H492 121 aa11.62□□□□□ -0.55
DDX39A-212ENST00000590260 PKHD1L1Q86WI1 4243 aa11.61□□□□□ -0.55
DDX39A-212ENST00000590260 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
DDX39A-212ENST00000590260 TRAV9-1A0A075B6T8 112 aa11.61□□□□□ -0.55
DDX39A-212ENST00000590260 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
DDX39A-212ENST00000590260 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
DDX39A-212ENST00000590260 SMAGPQ0VAQ4 97 aa11.6□□□□□ -0.55
DDX39A-212ENST00000590260 PRSS3P2Q8NHM4 247 aa11.6□□□□□ -0.55
DDX39A-212ENST00000590260 IGLV4-3A0A075B6K6 122 aa11.59□□□□□ -0.55
DDX39A-212ENST00000590260 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-212ENST00000590260 PYGO1Q9Y3Y4 419 aa11.59□□□□□ -0.55
DDX39A-212ENST00000590260 RAB5AP20339 215 aa11.58□□□□□ -0.56
DDX39A-212ENST00000590260 IFI27P40305 119 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-212ENST00000590260 COX6A2Q02221 97 aa11.58□□□□□ -0.56
DDX39A-212ENST00000590260 C5orf38Q86SI9 138 aa11.58□□□□□ -0.56
DDX39A-212ENST00000590260 SPACA4Q8TDM5 124 aa11.58□□□□□ -0.56
DDX39A-212ENST00000590260 COX7A2LO14548 114 aa11.57□□□□□ -0.56
DDX39A-212ENST00000590260 RHEBQ15382 184 aa11.57□□□□□ -0.56
DDX39A-212ENST00000590260 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
DDX39A-212ENST00000590260 LINC00173Q6ZV60 143 aa11.57□□□□□ -0.56
DDX39A-212ENST00000590260 GNB1LQ9BYB4 327 aa11.57□□□□□ -0.56
DDX39A-212ENST00000590260 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
DDX39A-212ENST00000590260 IGHV3OR16-9A0A0B4J2B5 98 aa11.56□□□□□ -0.56
DDX39A-212ENST00000590260 C2orf66Q6UXQ4 117 aa11.56□□□□□ -0.56
DDX39A-212ENST00000590260 IGLV4-69A0A075B6H9 119 aa11.55□□□□□ -0.56
DDX39A-212ENST00000590260 A0A087WYN8 130 aa11.54□□□□□ -0.56
DDX39A-212ENST00000590260 A0A096LNI7 61 aa11.54□□□□□ -0.56
DDX39A-212ENST00000590260 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
DDX39A-212ENST00000590260 IFITM10A6NMD0 228 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms