RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TMEM262E9PQX1 116 aa15.35■□□□□ 0.05
ATG4D-209ENST00000588857 ZNF25P17030 456 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-209ENST00000588857 PRSS29PA6NIE9 313 aa15.34■□□□□ 0.05
ATG4D-209ENST00000588857 MRPS36P82909 103 aaKnown RBP15.34■□□□□ 0.05
ATG4D-209ENST00000588857 ODF1Q14990 250 aa15.34■□□□□ 0.05
ATG4D-209ENST00000588857 CST9LQ9H4G1 147 aa15.34■□□□□ 0.05
ATG4D-209ENST00000588857 TEX43Q6ZNM6 134 aa15.33■□□□□ 0.05
ATG4D-209ENST00000588857 FAM104AQ969W3 186 aa15.33■□□□□ 0.05
ATG4D-209ENST00000588857 C12orf57Q99622 126 aa15.33■□□□□ 0.05
ATG4D-209ENST00000588857 DNAH7Q8WXX0 4024 aa15.33■□□□□ 0.04
ATG4D-209ENST00000588857 C3orf84H3BNL1 204 aa15.32■□□□□ 0.04
ATG4D-209ENST00000588857 ZC2HC1BQ5TFG8 222 aa15.32■□□□□ 0.04
ATG4D-209ENST00000588857 Q6ZUT4 128 aa15.32■□□□□ 0.04
ATG4D-209ENST00000588857 LINC00518Q8N0U6 118 aa15.32■□□□□ 0.04
ATG4D-209ENST00000588857 MUC7Q8TAX7 377 aa15.32■□□□□ 0.04
ATG4D-209ENST00000588857 CHTOPQ9Y3Y2 248 aaKnown RBP15.32■□□□□ 0.04
ATG4D-209ENST00000588857 TRAV8-6A0A0B4J262 113 aa15.32■□□□□ 0.04
ATG4D-209ENST00000588857 RNASE13Q5GAN3 156 aaKnown RBP15.32■□□□□ 0.04
ATG4D-209ENST00000588857 PKIAP61925 76 aa15.31■□□□□ 0.04
ATG4D-209ENST00000588857 ESRGQ1W209 222 aa15.31■□□□□ 0.04
ATG4D-209ENST00000588857 CDPF1Q6NVV7 123 aa15.31■□□□□ 0.04
ATG4D-209ENST00000588857 ATOH7Q8N100 152 aa15.31■□□□□ 0.04
ATG4D-209ENST00000588857 ZNF664Q8N3J9 261 aa15.31■□□□□ 0.04
ATG4D-209ENST00000588857 AMELXQ99217 191 aa15.31■□□□□ 0.04
ATG4D-209ENST00000588857 C2orf88Q9BSF0 95 aa15.31■□□□□ 0.04
ATG4D-209ENST00000588857 CDC42SE2Q9NRR3 84 aa15.31■□□□□ 0.04
ATG4D-209ENST00000588857 MRPL35Q9NZE8 188 aaKnown RBP15.31■□□□□ 0.04
ATG4D-209ENST00000588857 F8VRH5 84 aa15.3■□□□□ 0.04
ATG4D-209ENST00000588857 A0A1B0GUV1 79 aa15.29■□□□□ 0.04
ATG4D-209ENST00000588857 DPM2O94777 84 aa15.29■□□□□ 0.04
ATG4D-209ENST00000588857 PLNP26678 52 aa15.28■□□□□ 0.04
ATG4D-209ENST00000588857 S100A12P80511 92 aa15.28■□□□□ 0.04
ATG4D-209ENST00000588857 NUPR2A6NF83 97 aa15.28■□□□□ 0.04
ATG4D-209ENST00000588857 IGKCP01834 107 aa15.28■□□□□ 0.04
ATG4D-209ENST00000588857 RBX1P62877 108 aa15.28■□□□□ 0.04
ATG4D-209ENST00000588857 MPV17L2Q567V2 206 aa15.28■□□□□ 0.04
ATG4D-209ENST00000588857 IGLV4-60A0A075B6I1 120 aa15.27■□□□□ 0.03
ATG4D-209ENST00000588857 KLK5Q9Y337 293 aaPredicted RBP15.26■□□□□ 0.03
ATG4D-209ENST00000588857 CASC10Q5T4H9 136 aa15.25■□□□□ 0.03
ATG4D-209ENST00000588857 VAMP8Q9BV40 100 aa15.25■□□□□ 0.03
ATG4D-209ENST00000588857 CCL18P55774 89 aa15.24■□□□□ 0.03
ATG4D-209ENST00000588857 TRAV9-2A0A087WT02 112 aa15.24■□□□□ 0.03
ATG4D-209ENST00000588857 IGLV4-69A0A075B6H9 119 aa15.23■□□□□ 0.03
ATG4D-209ENST00000588857 HSBP1L1C9JCN9 74 aa15.23■□□□□ 0.03
ATG4D-209ENST00000588857 KMT2CQ8NEZ4 4911 aaKnown RBP15.22■□□□□ 0.03
ATG4D-209ENST00000588857 A0A0J9YXV3 536 aa15.22■□□□□ 0.03
ATG4D-209ENST00000588857 WFDC10BQ8IUB3 73 aa15.22■□□□□ 0.03
ATG4D-209ENST00000588857 TRAV13-1A0A0B4J241 112 aa15.21■□□□□ 0.03
ATG4D-209ENST00000588857 PAM16Q9Y3D7 125 aa15.21■□□□□ 0.03
ATG4D-209ENST00000588857 hDV102S1A0JD36 115 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 C11orf86A6NJI1 115 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 ANGP03950 147 aaKnown RBP15.2■□□□□ 0.02
ATG4D-209ENST00000588857 IGLC3P0DOY3 106 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 UBE2D1P51668 147 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 MAJINQ3KP22 176 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 Q8N3U1 123 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 CHAC1Q9BUX1 264 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 APLNQ9ULZ1 77 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 LINC00588Q9Y4M8 146 aa15.2■□□□□ 0.02
ATG4D-209ENST00000588857 IGKV3OR2-268A0A0C4DH90 116 aa15.19■□□□□ 0.02
ATG4D-209ENST00000588857 NFE4Q86UQ8 179 aa15.19■□□□□ 0.02
ATG4D-209ENST00000588857 MRPS16Q9Y3D3 137 aaKnown RBP15.19■□□□□ 0.02
ATG4D-209ENST00000588857 ZFAND6Q6FIF0 208 aa15.19■□□□□ 0.02
ATG4D-209ENST00000588857 TINCRA0A1B0GVN0 87 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 IGHV3-30P01768 117 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 IGHV3-33P01772 117 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 IGHV3-30-3P0DP02 117 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 IGHV3-30-5P0DP03 117 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 TCTAP57738 103 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 SEC11AP67812 179 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 LINC00269Q8N2A0 174 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 STPG4Q8N801 248 aa15.18■□□□□ 0.02
ATG4D-209ENST00000588857 GEMIN7Q9H840 131 aaKnown RBP15.18■□□□□ 0.02
ATG4D-209ENST00000588857 SPATA45Q537H7 98 aa15.17■□□□□ 0.02
ATG4D-209ENST00000588857 TMEM170BQ5T4T1 132 aa15.16■□□□□ 0.02
ATG4D-209ENST00000588857 LINC01556Q5JQF7 62 aa15.15■□□□□ 0.02
ATG4D-209ENST00000588857 LINC00242Q5T6M2 205 aa15.15■□□□□ 0.02
ATG4D-209ENST00000588857 CLPSL2Q6UWE3 100 aa15.15■□□□□ 0.02
ATG4D-209ENST00000588857 FAM19A3Q7Z5A8 133 aa15.15■□□□□ 0.02
ATG4D-209ENST00000588857 KLK12Q9UKR0 248 aa15.15■□□□□ 0.02
ATG4D-209ENST00000588857 CSMD3Q7Z407 3707 aa15.15■□□□□ 0.02
ATG4D-209ENST00000588857 HERVK_113P63121 156 aa15.14■□□□□ 0.01
ATG4D-209ENST00000588857 REG3AQ06141 175 aa15.14■□□□□ 0.01
ATG4D-209ENST00000588857 LINC00959A0A1B0GUT2 108 aa15.13■□□□□ 0.01
ATG4D-209ENST00000588857 SS18Q15532 418 aa15.13■□□□□ 0.01
ATG4D-209ENST00000588857 SIVA1O15304 175 aa15.12■□□□□ 0.01
ATG4D-209ENST00000588857 ZNF22P17026 224 aaPredicted RBP15.12■□□□□ 0.01
ATG4D-209ENST00000588857 UBE2DNLQ8IWF7 75 aa15.12■□□□□ 0.01
ATG4D-209ENST00000588857 LINC00469Q8N7U9 141 aa15.12■□□□□ 0.01
ATG4D-209ENST00000588857 UPK3BQ9BT76 320 aa15.12■□□□□ 0.01
ATG4D-209ENST00000588857 CCL25O15444 150 aa15.11■□□□□ 0.01
ATG4D-209ENST00000588857 DNAH10OSP0CZ25 163 aa15.11■□□□□ 0.01
ATG4D-209ENST00000588857 HERVK_113P61574 105 aa15.11■□□□□ 0.01
ATG4D-209ENST00000588857 DYNC2H1Q8NCM8 4307 aaKnown RBP15.11■□□□□ 0.01
ATG4D-209ENST00000588857 TENM2Q9NT68 2774 aa15.11■□□□□ 0.01
ATG4D-209ENST00000588857 STARD9Q9P2P6 4700 aa15.11■□□□□ 0.01
ATG4D-209ENST00000588857 COX6A2Q02221 97 aa15.11■□□□□ 0.01
ATG4D-209ENST00000588857 ANKRD39Q53RE8 183 aa15.11■□□□□ 0.01
ATG4D-209ENST00000588857 CRPP02741 224 aa15.1■□□□□ 0.01
ATG4D-209ENST00000588857 PRR34Q9NV39 138 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 1827.3 ms