RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 PKD1P98161 4303 aa6.64□□□□□ -1.35
TPM4-207ENST00000588032 HLA-DQA1P01909 254 aa6.64□□□□□ -1.35
TPM4-207ENST00000588032 KRTAP10-1P60331 282 aa6.64□□□□□ -1.35
TPM4-207ENST00000588032 C10orf91Q5T1B1 145 aa6.64□□□□□ -1.35
TPM4-207ENST00000588032 TMEM136Q6ZRR5 245 aa6.64□□□□□ -1.35
TPM4-207ENST00000588032 CLRN3Q8NCR9 226 aa6.64□□□□□ -1.35
TPM4-207ENST00000588032 OR5A1Q8NGJ0 315 aa6.64□□□□□ -1.35
TPM4-207ENST00000588032 CSDC2Q9Y534 153 aaKnown RBP6.64□□□□□ -1.35
TPM4-207ENST00000588032 IGLV10-54A0A075B6I4 117 aa6.63□□□□□ -1.35
TPM4-207ENST00000588032 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.63□□□□□ -1.35
TPM4-207ENST00000588032 USP17L23D6RBM5 183 aa6.63□□□□□ -1.35
TPM4-207ENST00000588032 S100PP25815 95 aa6.63□□□□□ -1.35
TPM4-207ENST00000588032 DGAT2L7PQ6IED9 249 aa6.63□□□□□ -1.35
TPM4-207ENST00000588032 PRELID3AQ96N28 172 aa6.63□□□□□ -1.35
TPM4-207ENST00000588032 SMIM2Q9BVW6 85 aa6.63□□□□□ -1.35
TPM4-207ENST00000588032 CARHSP1Q9Y2V2 147 aaKnown RBP6.63□□□□□ -1.35
TPM4-207ENST00000588032 PRSS47A8MTI9 375 aa6.62□□□□□ -1.35
TPM4-207ENST00000588032 NPYP01303 97 aa6.62□□□□□ -1.35
TPM4-207ENST00000588032 RHEBQ15382 184 aa6.62□□□□□ -1.35
TPM4-207ENST00000588032 CFAP161Q6P656 301 aa6.62□□□□□ -1.35
TPM4-207ENST00000588032 ZNF664Q8N3J9 261 aa6.62□□□□□ -1.35
TPM4-207ENST00000588032 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
TPM4-207ENST00000588032 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
TPM4-207ENST00000588032 DNAH11Q96DT5 4516 aa6.61□□□□□ -1.35
TPM4-207ENST00000588032 IGKV3OR2-268A0A0C4DH90 116 aa6.61□□□□□ -1.35
TPM4-207ENST00000588032 CCL25O15444 150 aa6.61□□□□□ -1.35
TPM4-207ENST00000588032 RAB5AP20339 215 aa6.61□□□□□ -1.35
TPM4-207ENST00000588032 SS18Q15532 418 aa6.61□□□□□ -1.35
TPM4-207ENST00000588032 COX19Q49B96 90 aa6.61□□□□□ -1.35
TPM4-207ENST00000588032 LCE3BQ5TA77 95 aa6.61□□□□□ -1.35
TPM4-207ENST00000588032 UBE2D4Q9Y2X8 147 aa6.61□□□□□ -1.35
TPM4-207ENST00000588032 LINC00959A0A1B0GUT2 108 aa6.6□□□□□ -1.35
TPM4-207ENST00000588032 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
TPM4-207ENST00000588032 PRSS1P07477 247 aa6.6□□□□□ -1.35
TPM4-207ENST00000588032 XGP55808 180 aa6.6□□□□□ -1.35
TPM4-207ENST00000588032 NDUFA5Q16718 116 aa6.6□□□□□ -1.35
TPM4-207ENST00000588032 Q8N1X5 172 aa6.6□□□□□ -1.35
TPM4-207ENST00000588032 CHCHD10Q8WYQ3 142 aaPredicted RBP6.6□□□□□ -1.35
TPM4-207ENST00000588032 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
TPM4-207ENST00000588032 K7EMI3 77 aa6.59□□□□□ -1.35
TPM4-207ENST00000588032 RPS10P5Q9NQ39 176 aa6.59□□□□□ -1.35
TPM4-207ENST00000588032 SPANXA1Q9NS26 97 aa6.59□□□□□ -1.35
TPM4-207ENST00000588032 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.35
TPM4-207ENST00000588032 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
TPM4-207ENST00000588032 hDV102S1A0JD36 115 aa6.58□□□□□ -1.36
TPM4-207ENST00000588032 C1orf196B1AJZ1 125 aa6.58□□□□□ -1.36
TPM4-207ENST00000588032 Q6ZSA8 131 aa6.58□□□□□ -1.36
TPM4-207ENST00000588032 Q8N8P6 123 aa6.58□□□□□ -1.36
TPM4-207ENST00000588032 GNB1LQ9BYB4 327 aa6.58□□□□□ -1.36
TPM4-207ENST00000588032 NXT2Q9NPJ8 142 aaKnown RBP6.58□□□□□ -1.36
TPM4-207ENST00000588032 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
TPM4-207ENST00000588032 KIAA1109Q2LD37 5005 aa6.57□□□□□ -1.36
TPM4-207ENST00000588032 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.57□□□□□ -1.36
TPM4-207ENST00000588032 SNAPINO95295 136 aa6.57□□□□□ -1.36
TPM4-207ENST00000588032 G0S2P27469 103 aa6.57□□□□□ -1.36
TPM4-207ENST00000588032 XCL1P47992 114 aa6.57□□□□□ -1.36
TPM4-207ENST00000588032 CNBPP62633 177 aaKnown RBP6.57□□□□□ -1.36
TPM4-207ENST00000588032 MRPS36P82909 103 aaKnown RBP6.57□□□□□ -1.36
TPM4-207ENST00000588032 FOXI1Q12951 378 aa6.57□□□□□ -1.36
TPM4-207ENST00000588032 CD164L2Q6UWJ8 174 aa6.57□□□□□ -1.36
TPM4-207ENST00000588032 SVBPQ8N300 66 aa6.57□□□□□ -1.36
TPM4-207ENST00000588032 C9orf163Q8N9P6 203 aa6.57□□□□□ -1.36
TPM4-207ENST00000588032 LOC389332A0A1B0GUA5 103 aa6.56□□□□□ -1.36
TPM4-207ENST00000588032 APOC3P02656 99 aa6.56□□□□□ -1.36
TPM4-207ENST00000588032 MT-ND6P03923 174 aa6.56□□□□□ -1.36
TPM4-207ENST00000588032 IFI27P40305 119 aaPredicted RBP6.56□□□□□ -1.36
TPM4-207ENST00000588032 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
TPM4-207ENST00000588032 ORMDL2Q53FV1 153 aa6.56□□□□□ -1.36
TPM4-207ENST00000588032 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
TPM4-207ENST00000588032 FAM30AQ9NZY2 134 aa6.56□□□□□ -1.36
TPM4-207ENST00000588032 PYGO1Q9Y3Y4 419 aa6.56□□□□□ -1.36
TPM4-207ENST00000588032 IGHV1-58A0A0C4DH39 117 aa6.55□□□□□ -1.36
TPM4-207ENST00000588032 LINC01620Q4KN68 170 aa6.55□□□□□ -1.36
TPM4-207ENST00000588032 C15orf56Q8N910 161 aa6.55□□□□□ -1.36
TPM4-207ENST00000588032 GVQW2A0A096LPI5 108 aaPredicted RBP6.54□□□□□ -1.36
TPM4-207ENST00000588032 TRAV13-1A0A0B4J241 112 aa6.54□□□□□ -1.36
TPM4-207ENST00000588032 EPM2AB3EWF7 344 aa6.54□□□□□ -1.36
TPM4-207ENST00000588032 NPSP0C0P6 89 aa6.54□□□□□ -1.36
TPM4-207ENST00000588032 KIAA1644Q3SXP7 199 aa6.54□□□□□ -1.36
TPM4-207ENST00000588032 Q6ZUT4 128 aa6.54□□□□□ -1.36
TPM4-207ENST00000588032 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
TPM4-207ENST00000588032 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 LINC01549A6NIU2 74 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 COX7A2LO14548 114 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 RNASE13Q5GAN3 156 aaKnown RBP6.53□□□□□ -1.36
TPM4-207ENST00000588032 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 SDIM1Q6ZPB5 146 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 PRSS3P2Q8NHM4 247 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 CHAC1Q9BUX1 264 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 KRTAP9-9Q9BYP9 154 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
TPM4-207ENST00000588032 HERC2O95714 4834 aa6.52□□□□□ -1.37
TPM4-207ENST00000588032 ZNF561-AS1K7EIQ3 104 aa6.52□□□□□ -1.37
TPM4-207ENST00000588032 APOMO95445 188 aa6.52□□□□□ -1.37
TPM4-207ENST00000588032 SLPIP03973 132 aa6.52□□□□□ -1.37
TPM4-207ENST00000588032 MALP21145 153 aa6.52□□□□□ -1.37
TPM4-207ENST00000588032 FABP9Q0Z7S8 132 aa6.52□□□□□ -1.37
TPM4-207ENST00000588032 PAPPA-AS1Q5QFB9 102 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms