RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 TIRAPP58753 221 aa10.24□□□□□ -0.77
CDK5RAP3-237ENST00000585163 ICOSQ9Y6W8 199 aa10.24□□□□□ -0.77
CDK5RAP3-237ENST00000585163 CENPEQ02224 2701 aa10.23□□□□□ -0.77
CDK5RAP3-237ENST00000585163 SMIM9A6NGZ8 99 aa10.23□□□□□ -0.77
CDK5RAP3-237ENST00000585163 TEX15Q9BXT5 2789 aa10.22□□□□□ -0.77
CDK5RAP3-237ENST00000585163 TRBV10-2A0A0K0K1G8 114 aa10.22□□□□□ -0.77
CDK5RAP3-237ENST00000585163 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-237ENST00000585163 NPC2P61916 151 aa10.22□□□□□ -0.77
CDK5RAP3-237ENST00000585163 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-237ENST00000585163 TMEM101Q96IK0 257 aa10.22□□□□□ -0.77
CDK5RAP3-237ENST00000585163 XCL2Q9UBD3 114 aa10.22□□□□□ -0.77
CDK5RAP3-237ENST00000585163 NDUFA1O15239 70 aa10.21□□□□□ -0.77
CDK5RAP3-237ENST00000585163 IFITM1P13164 125 aa10.21□□□□□ -0.77
CDK5RAP3-237ENST00000585163 KRTAP10-9P60411 292 aa10.21□□□□□ -0.77
CDK5RAP3-237ENST00000585163 ODF3L2Q3SX64 289 aa10.21□□□□□ -0.77
CDK5RAP3-237ENST00000585163 DGAT2L7PQ6IED9 249 aa10.21□□□□□ -0.77
CDK5RAP3-237ENST00000585163 FAM208BQ5VWN6 2430 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 MYO9AB2RTY4 2548 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 IGHV3OR16-12A0A075B7B8 117 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 GAGE12JA6NER3 117 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 GAGE7O76087 117 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 GAGE12FP0CL80 117 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 GAGE12GP0CL81 117 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 GAGE12IP0CL82 117 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 GAGE4Q13068 117 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 Q6ZSV7 163 aa10.21□□□□□ -0.78
CDK5RAP3-237ENST00000585163 COX6CP09669 75 aa10.2□□□□□ -0.78
CDK5RAP3-237ENST00000585163 HIST2H2BDQ6DRA6 164 aa10.2□□□□□ -0.78
CDK5RAP3-237ENST00000585163 IL17DQ8TAD2 202 aa10.2□□□□□ -0.78
CDK5RAP3-237ENST00000585163 COX6A2Q02221 97 aa10.2□□□□□ -0.78
CDK5RAP3-237ENST00000585163 C1orf158Q8N1D5 194 aa10.2□□□□□ -0.78
CDK5RAP3-237ENST00000585163 DEFB113Q30KQ7 82 aa10.19□□□□□ -0.78
CDK5RAP3-237ENST00000585163 PTPN13Q12923 2485 aa10.19□□□□□ -0.78
CDK5RAP3-237ENST00000585163 IGLV5-39A0A0G2JS06 123 aa10.18□□□□□ -0.78
CDK5RAP3-237ENST00000585163 TEX49A0A1B0GTD5 131 aa10.18□□□□□ -0.78
CDK5RAP3-237ENST00000585163 HERVK_113P63121 156 aa10.18□□□□□ -0.78
CDK5RAP3-237ENST00000585163 LINC00242Q5T6M2 205 aa10.18□□□□□ -0.78
CDK5RAP3-237ENST00000585163 FAM19A3Q7Z5A8 133 aa10.18□□□□□ -0.78
CDK5RAP3-237ENST00000585163 STHQ8IWL8 128 aa10.18□□□□□ -0.78
CDK5RAP3-237ENST00000585163 DAND5Q8N907 189 aa10.18□□□□□ -0.78
CDK5RAP3-237ENST00000585163 LRRK2Q5S007 2527 aa10.18□□□□□ -0.78
CDK5RAP3-237ENST00000585163 TRGV1A0A0A0MS02 117 aa10.17□□□□□ -0.78
CDK5RAP3-237ENST00000585163 H7C423 109 aa10.17□□□□□ -0.78
CDK5RAP3-237ENST00000585163 PRB1P04280 392 aa10.17□□□□□ -0.78
CDK5RAP3-237ENST00000585163 CIRBPQ14011 172 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-237ENST00000585163 LINC00694P0DN24 101 aa10.17□□□□□ -0.78
CDK5RAP3-237ENST00000585163 LRRC75A-AS1Q8N1F1 130 aa10.17□□□□□ -0.78
CDK5RAP3-237ENST00000585163 NAV2Q8IVL1 2488 aa10.17□□□□□ -0.78
CDK5RAP3-237ENST00000585163 AKAP9Q99996 3911 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 TRBV10-1A0A0K0K1A3 114 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 C2orf82Q6UX34 121 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 Q96MF0 132 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 H3BT86 120 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 LST1O00453 97 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 TMEM86BQ8N661 226 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 Q9H8V8 135 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 ZNF462Q96JM2 2506 aa10.16□□□□□ -0.78
CDK5RAP3-237ENST00000585163 RPL36AP83881 106 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 CLEC2BQ92478 149 aa10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 RPL36ALQ969Q0 106 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 UBE2WQ96B02 151 aa10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 CHD6Q8TD26 2715 aa10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 K7EQD1 137 aa10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 NHLRC4P0CG21 123 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 NTM-AS1Q6ZSK4 140 aa10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 DAZ4Q86SG3 579 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 DAZ3Q9NR90 486 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-237ENST00000585163 UBR5O95071 2799 aaPredicted RBP10.15□□□□□ -0.79
CDK5RAP3-237ENST00000585163 SMIM1B2RUZ4 78 aa10.14□□□□□ -0.79
CDK5RAP3-237ENST00000585163 Q6ZTI0 123 aa10.14□□□□□ -0.79
CDK5RAP3-237ENST00000585163 LINC00308Q8TCZ7 52 aa10.14□□□□□ -0.79
CDK5RAP3-237ENST00000585163 NDUFA7O95182 113 aa10.14□□□□□ -0.79
CDK5RAP3-237ENST00000585163 ABCA12Q86UK0 2595 aa10.14□□□□□ -0.79
CDK5RAP3-237ENST00000585163 ZNF469Q96JG9 3925 aaPredicted RBP10.13□□□□□ -0.79
CDK5RAP3-237ENST00000585163 TRAV4A0A0B4J268 109 aa10.13□□□□□ -0.79
CDK5RAP3-237ENST00000585163 TEX29Q8N6K0 151 aa10.13□□□□□ -0.79
CDK5RAP3-237ENST00000585163 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
CDK5RAP3-237ENST00000585163 TRAV8-4A0A0B4J246 113 aa10.12□□□□□ -0.79
CDK5RAP3-237ENST00000585163 KRTAP1-3Q8IUG1 177 aa10.12□□□□□ -0.79
CDK5RAP3-237ENST00000585163 TMEM126AQ9H061 195 aa10.12□□□□□ -0.79
CDK5RAP3-237ENST00000585163 CDC42SE2Q9NRR3 84 aa10.12□□□□□ -0.79
CDK5RAP3-237ENST00000585163 CCDC179H3BU77 68 aa10.12□□□□□ -0.79
CDK5RAP3-237ENST00000585163 ZNF625Q96I27 306 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-237ENST00000585163 ZFYVE26Q68DK2 2539 aa10.12□□□□□ -0.79
CDK5RAP3-237ENST00000585163 CCL24O00175 119 aa10.11□□□□□ -0.79
CDK5RAP3-237ENST00000585163 BBC3Q96PG8 261 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-237ENST00000585163 A0A1W2PRX2 142 aa10.11□□□□□ -0.79
CDK5RAP3-237ENST00000585163 F5H768 121 aa10.11□□□□□ -0.79
CDK5RAP3-237ENST00000585163 SNCGO76070 127 aa10.11□□□□□ -0.79
CDK5RAP3-237ENST00000585163 C11orf44Q8N8P7 122 aa10.11□□□□□ -0.79
CDK5RAP3-237ENST00000585163 MRAPQ8TCY5 172 aa10.1□□□□□ -0.79
CDK5RAP3-237ENST00000585163 COPS9Q8WXC6 57 aa10.1□□□□□ -0.79
CDK5RAP3-237ENST00000585163 DNAJC9-AS1A6NH13 148 aa10.1□□□□□ -0.79
CDK5RAP3-237ENST00000585163 CRLF1O75462 422 aa10.1□□□□□ -0.79
CDK5RAP3-237ENST00000585163 SOSTDC1Q6X4U4 206 aa10.1□□□□□ -0.79
CDK5RAP3-237ENST00000585163 EPG5Q9HCE0 2579 aa10.1□□□□□ -0.79
CDK5RAP3-237ENST00000585163 A0A0U1RRA0 63 aa10.09□□□□□ -0.79
CDK5RAP3-237ENST00000585163 DEFB121Q5J5C9 76 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms