RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
ERBB2-222ENST00000584908 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
ERBB2-222ENST00000584908 OR5A1Q8NGJ0 315 aa10.61□□□□□ -0.71
ERBB2-222ENST00000584908 TMEM101Q96IK0 257 aa10.61□□□□□ -0.71
ERBB2-222ENST00000584908 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
ERBB2-222ENST00000584908 LAMTOR2Q9Y2Q5 125 aa10.61□□□□□ -0.71
ERBB2-222ENST00000584908 DNAH8Q96JB1 4490 aa10.61□□□□□ -0.71
ERBB2-222ENST00000584908 PRELID3AQ96N28 172 aa10.6□□□□□ -0.71
ERBB2-222ENST00000584908 PRSS1P07477 247 aa10.59□□□□□ -0.71
ERBB2-222ENST00000584908 SMAGPQ0VAQ4 97 aa10.59□□□□□ -0.71
ERBB2-222ENST00000584908 Q6ZSA8 131 aa10.59□□□□□ -0.71
ERBB2-222ENST00000584908 CLRN3Q8NCR9 226 aa10.59□□□□□ -0.71
ERBB2-222ENST00000584908 TIMM21Q9BVV7 248 aa10.59□□□□□ -0.71
ERBB2-222ENST00000584908 UBE2D4Q9Y2X8 147 aa10.59□□□□□ -0.71
ERBB2-222ENST00000584908 Q8N1X5 172 aa10.58□□□□□ -0.71
ERBB2-222ENST00000584908 ZNF664Q8N3J9 261 aa10.58□□□□□ -0.71
ERBB2-222ENST00000584908 TMEM18Q96B42 140 aa10.58□□□□□ -0.71
ERBB2-222ENST00000584908 RHEBQ15382 184 aa10.58□□□□□ -0.72
ERBB2-222ENST00000584908 DGAT2L7PQ6IED9 249 aa10.58□□□□□ -0.72
ERBB2-222ENST00000584908 CHCHD10Q8WYQ3 142 aaPredicted RBP10.58□□□□□ -0.72
ERBB2-222ENST00000584908 PCLOQ9Y6V0 5065 aa10.57□□□□□ -0.72
ERBB2-222ENST00000584908 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
ERBB2-222ENST00000584908 LINC00959A0A1B0GUT2 108 aa10.57□□□□□ -0.72
ERBB2-222ENST00000584908 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
ERBB2-222ENST00000584908 FAM30AQ9NZY2 134 aa10.57□□□□□ -0.72
ERBB2-222ENST00000584908 CCL25O15444 150 aa10.55□□□□□ -0.72
ERBB2-222ENST00000584908 S100PP25815 95 aa10.55□□□□□ -0.72
ERBB2-222ENST00000584908 CNBPP62633 177 aaKnown RBP10.55□□□□□ -0.72
ERBB2-222ENST00000584908 FOXI1Q12951 378 aa10.55□□□□□ -0.72
ERBB2-222ENST00000584908 KRTAP4-5Q9BYR2 181 aa10.55□□□□□ -0.72
ERBB2-222ENST00000584908 RPL39P62891 51 aaKnown RBP10.54□□□□□ -0.72
ERBB2-222ENST00000584908 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
ERBB2-222ENST00000584908 C15orf56Q8N910 161 aa10.54□□□□□ -0.72
ERBB2-222ENST00000584908 C9orf163Q8N9P6 203 aa10.54□□□□□ -0.72
ERBB2-222ENST00000584908 FAM104AQ969W3 186 aa10.54□□□□□ -0.72
ERBB2-222ENST00000584908 MAP1LC3AQ9H492 121 aa10.54□□□□□ -0.72
ERBB2-222ENST00000584908 SPANXA1Q9NS26 97 aa10.54□□□□□ -0.72
ERBB2-222ENST00000584908 ABCA13Q86UQ4 5058 aa10.54□□□□□ -0.72
ERBB2-222ENST00000584908 RAB5AP20339 215 aa10.53□□□□□ -0.72
ERBB2-222ENST00000584908 SS18Q15532 418 aa10.53□□□□□ -0.72
ERBB2-222ENST00000584908 COX19Q49B96 90 aa10.53□□□□□ -0.72
ERBB2-222ENST00000584908 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
ERBB2-222ENST00000584908 Q8N8P6 123 aa10.53□□□□□ -0.72
ERBB2-222ENST00000584908 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
ERBB2-222ENST00000584908 RPS10P5Q9NQ39 176 aa10.53□□□□□ -0.72
ERBB2-222ENST00000584908 hDV102S1A0JD36 115 aa10.52□□□□□ -0.73
ERBB2-222ENST00000584908 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
ERBB2-222ENST00000584908 K7EMI3 77 aa10.52□□□□□ -0.73
ERBB2-222ENST00000584908 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.73
ERBB2-222ENST00000584908 CD164L2Q6UWJ8 174 aa10.52□□□□□ -0.73
ERBB2-222ENST00000584908 Q6ZUT4 128 aa10.52□□□□□ -0.73
ERBB2-222ENST00000584908 FAT1Q14517 4588 aa10.51□□□□□ -0.73
ERBB2-222ENST00000584908 XCL1P47992 114 aa10.51□□□□□ -0.73
ERBB2-222ENST00000584908 PYGO1Q9Y3Y4 419 aa10.51□□□□□ -0.73
ERBB2-222ENST00000584908 SRRM2Q9UQ35 2752 aaKnown RBP10.5□□□□□ -0.73
ERBB2-222ENST00000584908 GVQW2A0A096LPI5 108 aaPredicted RBP10.5□□□□□ -0.73
ERBB2-222ENST00000584908 LOC389332A0A1B0GUA5 103 aa10.5□□□□□ -0.73
ERBB2-222ENST00000584908 APOC3P02656 99 aa10.5□□□□□ -0.73
ERBB2-222ENST00000584908 SLPIP03973 132 aa10.5□□□□□ -0.73
ERBB2-222ENST00000584908 NXT2Q9NPJ8 142 aaKnown RBP10.5□□□□□ -0.73
ERBB2-222ENST00000584908 SNAPINO95295 136 aa10.49□□□□□ -0.73
ERBB2-222ENST00000584908 MT-ND6P03923 174 aa10.49□□□□□ -0.73
ERBB2-222ENST00000584908 NDUFA5Q16718 116 aa10.49□□□□□ -0.73
ERBB2-222ENST00000584908 RNASE13Q5GAN3 156 aaKnown RBP10.49□□□□□ -0.73
ERBB2-222ENST00000584908 SVBPQ8N300 66 aa10.49□□□□□ -0.73
ERBB2-222ENST00000584908 AP5S1Q9NUS5 200 aa10.49□□□□□ -0.73
ERBB2-222ENST00000584908 KIAA1644Q3SXP7 199 aa10.48□□□□□ -0.73
ERBB2-222ENST00000584908 ORMDL2Q53FV1 153 aa10.48□□□□□ -0.73
ERBB2-222ENST00000584908 VPS13BQ7Z7G8 4022 aa10.47□□□□□ -0.73
ERBB2-222ENST00000584908 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.47□□□□□ -0.73
ERBB2-222ENST00000584908 IFI27P40305 119 aaPredicted RBP10.47□□□□□ -0.73
ERBB2-222ENST00000584908 HAMPP81172 84 aa10.47□□□□□ -0.73
ERBB2-222ENST00000584908 SDIM1Q6ZPB5 146 aa10.47□□□□□ -0.73
ERBB2-222ENST00000584908 CHAC1Q9BUX1 264 aa10.47□□□□□ -0.73
ERBB2-222ENST00000584908 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.73
ERBB2-222ENST00000584908 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
ERBB2-222ENST00000584908 EPM2AB3EWF7 344 aa10.46□□□□□ -0.73
ERBB2-222ENST00000584908 OPRPNQ99935 248 aaPredicted RBP10.46□□□□□ -0.73
ERBB2-222ENST00000584908 ALKBH7Q9BT30 221 aaPredicted RBP10.46□□□□□ -0.73
ERBB2-222ENST00000584908 NPSP0C0P6 89 aa10.45□□□□□ -0.74
ERBB2-222ENST00000584908 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
ERBB2-222ENST00000584908 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
ERBB2-222ENST00000584908 SCXQ7RTU7 201 aa10.45□□□□□ -0.74
ERBB2-222ENST00000584908 CYSLTR1Q9Y271 337 aa10.45□□□□□ -0.74
ERBB2-222ENST00000584908 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
ERBB2-222ENST00000584908 LINC01546A6NGU7 62 aa10.44□□□□□ -0.74
ERBB2-222ENST00000584908 SMR3BP02814 79 aaPredicted RBP10.44□□□□□ -0.74
ERBB2-222ENST00000584908 Q5VSD8 79 aa10.44□□□□□ -0.74
ERBB2-222ENST00000584908 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
ERBB2-222ENST00000584908 IGHV3-64A0A075B6Q5 118 aa10.43□□□□□ -0.74
ERBB2-222ENST00000584908 COX7A2LO14548 114 aa10.43□□□□□ -0.74
ERBB2-222ENST00000584908 G0S2P27469 103 aa10.43□□□□□ -0.74
ERBB2-222ENST00000584908 CIRBPQ14011 172 aaKnown RBP10.43□□□□□ -0.74
ERBB2-222ENST00000584908 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
ERBB2-222ENST00000584908 TMEM141Q96I45 108 aa10.43□□□□□ -0.74
ERBB2-222ENST00000584908 TGIF2-C20orf24A0A0A6YYL0 155 aa10.42□□□□□ -0.74
ERBB2-222ENST00000584908 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
ERBB2-222ENST00000584908 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
ERBB2-222ENST00000584908 IFITM10A6NMD0 228 aa10.42□□□□□ -0.74
ERBB2-222ENST00000584908 FAM229AH3BQW9 127 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms