RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 Q0VG73 95 aa6.61□□□□□ -1.35
GGA3-219ENST00000584550 AMMECR1LQ6DCA0 310 aa6.61□□□□□ -1.35
GGA3-219ENST00000584550 ATP5L2Q7Z4Y8 100 aa6.61□□□□□ -1.35
GGA3-219ENST00000584550 NRACQ8N912 160 aa6.61□□□□□ -1.35
GGA3-219ENST00000584550 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 IGKV3OR2-268A0A0C4DH90 116 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 D6R8Y8 96 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 VCYO14598 125 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 PPP1R17O96001 155 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 TSHBP01222 138 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 FCER1GP30273 86 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 POLR2KP53803 58 aaKnown RBP6.6□□□□□ -1.35
GGA3-219ENST00000584550 RNASEKQ6P5S7 137 aaKnown RBP6.6□□□□□ -1.35
GGA3-219ENST00000584550 BTF3L4Q96K17 158 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 C1orf43Q9BWL3 253 aa6.6□□□□□ -1.35
GGA3-219ENST00000584550 IGLV10-54A0A075B6I4 117 aa6.59□□□□□ -1.35
GGA3-219ENST00000584550 TNFRSF6BO95407 300 aa6.59□□□□□ -1.35
GGA3-219ENST00000584550 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.35
GGA3-219ENST00000584550 REG3AQ06141 175 aa6.59□□□□□ -1.35
GGA3-219ENST00000584550 C20orf203Q8NBC4 194 aa6.59□□□□□ -1.35
GGA3-219ENST00000584550 CTDSP1Q9GZU7 261 aa6.59□□□□□ -1.35
GGA3-219ENST00000584550 COX11Q9Y6N1 276 aa6.59□□□□□ -1.35
GGA3-219ENST00000584550 TRBV27A0A0K0K1C4 114 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 A0A1B0GUV1 79 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 C7orf77A4D0Y5 90 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 NPYP01303 97 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 HLA-DQA1P01909 254 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 FGF6P10767 208 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 MIAQ16674 131 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 TMEM136Q6ZRR5 245 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 RPS10P5Q9NQ39 176 aa6.58□□□□□ -1.36
GGA3-219ENST00000584550 APOC3P02656 99 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 S100PP25815 95 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 C10orf91Q5T1B1 145 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 Q6ZRU5 148 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 ORMDL3Q8N138 153 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 TMEM101Q96IK0 257 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 PRELID3AQ96N28 172 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 IMMP2LQ96T52 175 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 KIR2DL4Q99706 377 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 C20orf78Q9BR46 151 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 PRR34Q9NV39 138 aa6.57□□□□□ -1.36
GGA3-219ENST00000584550 CARHSP1Q9Y2V2 147 aaKnown RBP6.57□□□□□ -1.36
GGA3-219ENST00000584550 TRBV24-1A0A075B6N3 115 aa6.56□□□□□ -1.36
GGA3-219ENST00000584550 LOC389332A0A1B0GUA5 103 aa6.56□□□□□ -1.36
GGA3-219ENST00000584550 H7C423 109 aa6.56□□□□□ -1.36
GGA3-219ENST00000584550 PPBPP02775 128 aa6.56□□□□□ -1.36
GGA3-219ENST00000584550 ESDP10768 282 aa6.56□□□□□ -1.36
GGA3-219ENST00000584550 TCAPO15273 167 aa6.55□□□□□ -1.36
GGA3-219ENST00000584550 RHEBQ15382 184 aa6.55□□□□□ -1.36
GGA3-219ENST00000584550 DGAT2L7PQ6IED9 249 aa6.55□□□□□ -1.36
GGA3-219ENST00000584550 SVBPQ8N300 66 aa6.55□□□□□ -1.36
GGA3-219ENST00000584550 OR5A1Q8NGJ0 315 aa6.55□□□□□ -1.36
GGA3-219ENST00000584550 SMIM2Q9BVW6 85 aa6.55□□□□□ -1.36
GGA3-219ENST00000584550 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
GGA3-219ENST00000584550 USP17L23D6RBM5 183 aa6.54□□□□□ -1.36
GGA3-219ENST00000584550 PHOX2AO14813 284 aa6.54□□□□□ -1.36
GGA3-219ENST00000584550 ZNF25P17030 456 aaPredicted RBP6.54□□□□□ -1.36
GGA3-219ENST00000584550 RAB5AP20339 215 aa6.54□□□□□ -1.36
GGA3-219ENST00000584550 KIAA1644Q3SXP7 199 aa6.54□□□□□ -1.36
GGA3-219ENST00000584550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
GGA3-219ENST00000584550 TRAV9-1A0A075B6T8 112 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 TRAV8-4A0A0B4J246 113 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 GAGE12HA6NDE8 117 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 PANO1I0J062 215 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 RPL32P62910 135 aaKnown RBP6.53□□□□□ -1.36
GGA3-219ENST00000584550 S100A12P80511 92 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 KRTAP26-1Q6PEX3 210 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 LINC00518Q8N0U6 118 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 MAP1LC3AQ9H492 121 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 LPAP08519 4548 aa6.53□□□□□ -1.36
GGA3-219ENST00000584550 SNAPINO95295 136 aa6.52□□□□□ -1.37
GGA3-219ENST00000584550 RPL39P62891 51 aaKnown RBP6.52□□□□□ -1.37
GGA3-219ENST00000584550 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
GGA3-219ENST00000584550 ZNF664Q8N3J9 261 aa6.52□□□□□ -1.37
GGA3-219ENST00000584550 CHCHD10Q8WYQ3 142 aaPredicted RBP6.52□□□□□ -1.37
GGA3-219ENST00000584550 CDC42SE2Q9NRR3 84 aa6.52□□□□□ -1.37
GGA3-219ENST00000584550 XCL1P47992 114 aa6.51□□□□□ -1.37
GGA3-219ENST00000584550 CTAG1AP78358 180 aa6.51□□□□□ -1.37
GGA3-219ENST00000584550 SMAGPQ0VAQ4 97 aa6.51□□□□□ -1.37
GGA3-219ENST00000584550 C14orf177Q52M58 125 aa6.51□□□□□ -1.37
GGA3-219ENST00000584550 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
GGA3-219ENST00000584550 LAMTOR2Q9Y2Q5 125 aa6.51□□□□□ -1.37
GGA3-219ENST00000584550 UBE2D4Q9Y2X8 147 aa6.51□□□□□ -1.37
GGA3-219ENST00000584550 TGIF2-C20orf24A0A0A6YYL0 155 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 CCL25O15444 150 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 PRSS1P07477 247 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 FABP9Q0Z7S8 132 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 SS18Q15532 418 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 Q6ZUT4 128 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 Q8N8P6 123 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 GNB1LQ9BYB4 327 aa6.5□□□□□ -1.37
GGA3-219ENST00000584550 TRAV13-1A0A0B4J241 112 aa6.49□□□□□ -1.37
GGA3-219ENST00000584550 hDV102S1A0JD36 115 aa6.49□□□□□ -1.37
GGA3-219ENST00000584550 PRSS47A8MTI9 375 aa6.49□□□□□ -1.37
GGA3-219ENST00000584550 DPH3Q96FX2 82 aa6.49□□□□□ -1.37
GGA3-219ENST00000584550 OPRPNQ99935 248 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms