RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 COX11Q9Y6N1 276 aa10.83□□□□□ -0.68
RNF43-206ENST00000582293 LECT2O14960 151 aa10.82□□□□□ -0.68
RNF43-206ENST00000582293 CBLN2Q8IUK8 224 aa10.82□□□□□ -0.68
RNF43-206ENST00000582293 Q8N8P6 123 aa10.82□□□□□ -0.68
RNF43-206ENST00000582293 ALKBH7Q9BT30 221 aaPredicted RBP10.82□□□□□ -0.68
RNF43-206ENST00000582293 CDC42SE2Q9NRR3 84 aa10.82□□□□□ -0.68
RNF43-206ENST00000582293 IGLV10-54A0A075B6I4 117 aa10.81□□□□□ -0.68
RNF43-206ENST00000582293 MT-ND6P03923 174 aa10.81□□□□□ -0.68
RNF43-206ENST00000582293 Q8N814 137 aa10.81□□□□□ -0.68
RNF43-206ENST00000582293 IFI27P40305 119 aaPredicted RBP10.8□□□□□ -0.68
RNF43-206ENST00000582293 OR5A1Q8NGJ0 315 aa10.8□□□□□ -0.68
RNF43-206ENST00000582293 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
RNF43-206ENST00000582293 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
RNF43-206ENST00000582293 FABP9Q0Z7S8 132 aa10.79□□□□□ -0.68
RNF43-206ENST00000582293 TIMM21Q9BVV7 248 aa10.79□□□□□ -0.68
RNF43-206ENST00000582293 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
RNF43-206ENST00000582293 IGKV3OR2-268A0A0C4DH90 116 aa10.78□□□□□ -0.68
RNF43-206ENST00000582293 Q6ZUT4 128 aa10.78□□□□□ -0.68
RNF43-206ENST00000582293 ZNF664Q8N3J9 261 aa10.78□□□□□ -0.68
RNF43-206ENST00000582293 TMEM101Q96IK0 257 aa10.78□□□□□ -0.68
RNF43-206ENST00000582293 C16orf90A8MZG2 172 aa10.77□□□□□ -0.69
RNF43-206ENST00000582293 EREGO14944 169 aa10.77□□□□□ -0.69
RNF43-206ENST00000582293 RNASE13Q5GAN3 156 aaKnown RBP10.77□□□□□ -0.69
RNF43-206ENST00000582293 OPRPNQ99935 248 aaPredicted RBP10.77□□□□□ -0.69
RNF43-206ENST00000582293 SMCO4Q9NRQ5 59 aa10.77□□□□□ -0.69
RNF43-206ENST00000582293 PGPEP1Q9NXJ5 209 aa10.77□□□□□ -0.69
RNF43-206ENST00000582293 TRAPPC1Q9Y5R8 145 aa10.77□□□□□ -0.69
RNF43-206ENST00000582293 RYR1P21817 5038 aa10.76□□□□□ -0.69
RNF43-206ENST00000582293 LINC00959A0A1B0GUT2 108 aa10.76□□□□□ -0.69
RNF43-206ENST00000582293 RAB5AP20339 215 aa10.76□□□□□ -0.69
RNF43-206ENST00000582293 TMEM18Q96B42 140 aa10.76□□□□□ -0.69
RNF43-206ENST00000582293 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
RNF43-206ENST00000582293 DNAH8Q96JB1 4490 aa10.75□□□□□ -0.69
RNF43-206ENST00000582293 LINC01546A6NGU7 62 aa10.75□□□□□ -0.69
RNF43-206ENST00000582293 CHCHD10Q8WYQ3 142 aaPredicted RBP10.75□□□□□ -0.69
RNF43-206ENST00000582293 HERC2O95714 4834 aa10.74□□□□□ -0.69
RNF43-206ENST00000582293 GAGE12HA6NDE8 117 aa10.74□□□□□ -0.69
RNF43-206ENST00000582293 USP17L23D6RBM5 183 aa10.74□□□□□ -0.69
RNF43-206ENST00000582293 K7EMI3 77 aa10.74□□□□□ -0.69
RNF43-206ENST00000582293 DGAT2L7PQ6IED9 249 aa10.74□□□□□ -0.69
RNF43-206ENST00000582293 CDPF1Q6NVV7 123 aa10.74□□□□□ -0.69
RNF43-206ENST00000582293 NTN5Q8WTR8 489 aaPredicted RBP10.74□□□□□ -0.69
RNF43-206ENST00000582293 URB1-AS1Q96HZ7 61 aa10.74□□□□□ -0.69
RNF43-206ENST00000582293 SPANXA1Q9NS26 97 aa10.74□□□□□ -0.69
RNF43-206ENST00000582293 MRPS36P82909 103 aaKnown RBP10.73□□□□□ -0.69
RNF43-206ENST00000582293 FOXI1Q12951 378 aa10.73□□□□□ -0.69
RNF43-206ENST00000582293 ORMDL2Q53FV1 153 aa10.73□□□□□ -0.69
RNF43-206ENST00000582293 C2orf66Q6UXQ4 117 aa10.73□□□□□ -0.69
RNF43-206ENST00000582293 PYGO1Q9Y3Y4 419 aa10.73□□□□□ -0.69
RNF43-206ENST00000582293 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.72□□□□□ -0.69
RNF43-206ENST00000582293 IGLV4-3A0A075B6K6 122 aa10.72□□□□□ -0.69
RNF43-206ENST00000582293 CCL25O15444 150 aa10.72□□□□□ -0.69
RNF43-206ENST00000582293 KRTAP10-1P60331 282 aa10.72□□□□□ -0.69
RNF43-206ENST00000582293 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
RNF43-206ENST00000582293 IGLV5-52A0A0A0MRZ9 124 aa10.71□□□□□ -0.69
RNF43-206ENST00000582293 PRSS1P07477 247 aa10.71□□□□□ -0.69
RNF43-206ENST00000582293 SMAGPQ0VAQ4 97 aa10.71□□□□□ -0.69
RNF43-206ENST00000582293 PRSS3P2Q8NHM4 247 aa10.71□□□□□ -0.69
RNF43-206ENST00000582293 IGIPA6NJ69 53 aa10.7□□□□□ -0.7
RNF43-206ENST00000582293 COLCA2A8K830 154 aa10.7□□□□□ -0.7
RNF43-206ENST00000582293 SCO1O75880 301 aa10.7□□□□□ -0.7
RNF43-206ENST00000582293 XCL1P47992 114 aa10.7□□□□□ -0.7
RNF43-206ENST00000582293 C15orf56Q8N910 161 aa10.7□□□□□ -0.7
RNF43-206ENST00000582293 CYSLTR1Q9Y271 337 aa10.7□□□□□ -0.7
RNF43-206ENST00000582293 HSPG2P98160 4391 aa10.69□□□□□ -0.7
RNF43-206ENST00000582293 TRAV13-1A0A0B4J241 112 aa10.69□□□□□ -0.7
RNF43-206ENST00000582293 GCSHP23434 173 aa10.68□□□□□ -0.7
RNF43-206ENST00000582293 SS18Q15532 418 aa10.68□□□□□ -0.7
RNF43-206ENST00000582293 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
RNF43-206ENST00000582293 LINC00173Q6ZV60 143 aa10.68□□□□□ -0.7
RNF43-206ENST00000582293 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
RNF43-206ENST00000582293 A0A096LNJ9 63 aa10.67□□□□□ -0.7
RNF43-206ENST00000582293 C1orf196B1AJZ1 125 aa10.67□□□□□ -0.7
RNF43-206ENST00000582293 SLPIP03973 132 aa10.67□□□□□ -0.7
RNF43-206ENST00000582293 LINC01620Q4KN68 170 aa10.67□□□□□ -0.7
RNF43-206ENST00000582293 CD164L2Q6UWJ8 174 aa10.67□□□□□ -0.7
RNF43-206ENST00000582293 C14orf177Q52M58 125 aa10.66□□□□□ -0.7
RNF43-206ENST00000582293 FA2HQ7L5A8 372 aa10.66□□□□□ -0.7
RNF43-206ENST00000582293 TMEM141Q96I45 108 aa10.66□□□□□ -0.7
RNF43-206ENST00000582293 AMELXQ99217 191 aa10.66□□□□□ -0.7
RNF43-206ENST00000582293 KRTAP17-1Q9BYP8 105 aa10.66□□□□□ -0.7
RNF43-206ENST00000582293 TRGC2P03986 189 aa10.65□□□□□ -0.7
RNF43-206ENST00000582293 IFITM10A6NMD0 228 aa10.64□□□□□ -0.71
RNF43-206ENST00000582293 NPSP0C0P6 89 aa10.64□□□□□ -0.71
RNF43-206ENST00000582293 LINC00614P0C842 121 aa10.64□□□□□ -0.71
RNF43-206ENST00000582293 TIMM17AQ99595 171 aa10.64□□□□□ -0.71
RNF43-206ENST00000582293 GVQW2A0A096LPI5 108 aaPredicted RBP10.63□□□□□ -0.71
RNF43-206ENST00000582293 hDV102S1A0JD36 115 aa10.63□□□□□ -0.71
RNF43-206ENST00000582293 CDK2AP2O75956 126 aa10.63□□□□□ -0.71
RNF43-206ENST00000582293 UBE2D1P51668 147 aa10.63□□□□□ -0.71
RNF43-206ENST00000582293 HIGD2BQ4VC39 106 aa10.63□□□□□ -0.71
RNF43-206ENST00000582293 LINC00242Q5T6M2 205 aa10.63□□□□□ -0.71
RNF43-206ENST00000582293 AP5S1Q9NUS5 200 aa10.63□□□□□ -0.71
RNF43-206ENST00000582293 FAM30AQ9NZY2 134 aa10.63□□□□□ -0.71
RNF43-206ENST00000582293 IGHV3OR16-9A0A0B4J2B5 98 aa10.62□□□□□ -0.71
RNF43-206ENST00000582293 G0S2P27469 103 aa10.62□□□□□ -0.71
RNF43-206ENST00000582293 XGP55808 180 aa10.62□□□□□ -0.71
RNF43-206ENST00000582293 COX6A2Q02221 97 aa10.62□□□□□ -0.71
RNF43-206ENST00000582293 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
RNF43-206ENST00000582293 ERASQ7Z444 233 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms