RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 HSBP1L1C9JCN9 74 aa8.75□□□□□ -1.01
SRSF1-204ENST00000581979 PMVKQ15126 192 aa8.75□□□□□ -1.01
SRSF1-204ENST00000581979 MAJINQ3KP22 176 aa8.75□□□□□ -1.01
SRSF1-204ENST00000581979 SPATA45Q537H7 98 aa8.75□□□□□ -1.01
SRSF1-204ENST00000581979 Q6ZTC4 211 aa8.75□□□□□ -1.01
SRSF1-204ENST00000581979 PRO1933Q9H354 126 aa8.75□□□□□ -1.01
SRSF1-204ENST00000581979 SPANXA1Q9NS26 97 aa8.75□□□□□ -1.01
SRSF1-204ENST00000581979 UBE2D4Q9Y2X8 147 aa8.75□□□□□ -1.01
SRSF1-204ENST00000581979 hDV102S1A0JD36 115 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 PRSS29PA6NIE9 313 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 UBE2L6O14933 153 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 LY6G6CO95867 125 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 IGKCP01834 107 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 PKIAP61925 76 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 PAPPA-AS1Q5QFB9 102 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 OPRPNQ99935 248 aaPredicted RBP8.74□□□□□ -1.01
SRSF1-204ENST00000581979 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
SRSF1-204ENST00000581979 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 A0A096LPF7 62 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 F8VRH5 84 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 TSTD3H0UI37 97 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 DPM2O94777 84 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 NANOS2P60321 138 aaKnown RBP8.74□□□□□ -1.01
SRSF1-204ENST00000581979 ZC2HC1BQ5TFG8 222 aa8.74□□□□□ -1.01
SRSF1-204ENST00000581979 TRBV6-8A0A0A6YYG3 113 aa8.73□□□□□ -1.01
SRSF1-204ENST00000581979 NPSP0C0P6 89 aa8.73□□□□□ -1.01
SRSF1-204ENST00000581979 SMAGPQ0VAQ4 97 aa8.73□□□□□ -1.01
SRSF1-204ENST00000581979 DGAT2L7PQ6IED9 249 aa8.73□□□□□ -1.01
SRSF1-204ENST00000581979 VCX2Q9H322 139 aa8.73□□□□□ -1.01
SRSF1-204ENST00000581979 ICOSQ9Y6W8 199 aa8.73□□□□□ -1.01
SRSF1-204ENST00000581979 PLNP26678 52 aa8.72□□□□□ -1.01
SRSF1-204ENST00000581979 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
SRSF1-204ENST00000581979 AMMECR1LQ6DCA0 310 aa8.72□□□□□ -1.01
SRSF1-204ENST00000581979 TIMM21Q9BVV7 248 aa8.72□□□□□ -1.01
SRSF1-204ENST00000581979 CST9LQ9H4G1 147 aa8.72□□□□□ -1.01
SRSF1-204ENST00000581979 H7C423 109 aa8.71□□□□□ -1.01
SRSF1-204ENST00000581979 FGF6P10767 208 aa8.71□□□□□ -1.01
SRSF1-204ENST00000581979 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.01
SRSF1-204ENST00000581979 RNASE13Q5GAN3 156 aaKnown RBP8.71□□□□□ -1.02
SRSF1-204ENST00000581979 Q6ZUT4 128 aa8.71□□□□□ -1.02
SRSF1-204ENST00000581979 SH2D6Q7Z4S9 175 aa8.71□□□□□ -1.02
SRSF1-204ENST00000581979 TMEM101Q96IK0 257 aa8.71□□□□□ -1.02
SRSF1-204ENST00000581979 BIRC6Q9NR09 4857 aa8.7□□□□□ -1.02
SRSF1-204ENST00000581979 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
SRSF1-204ENST00000581979 GAGE6Q13070 117 aa8.7□□□□□ -1.02
SRSF1-204ENST00000581979 MRPL52Q86TS9 123 aaKnown RBP8.7□□□□□ -1.02
SRSF1-204ENST00000581979 STPG4Q8N801 248 aa8.7□□□□□ -1.02
SRSF1-204ENST00000581979 AMELXQ99217 191 aa8.7□□□□□ -1.02
SRSF1-204ENST00000581979 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
SRSF1-204ENST00000581979 OR5A1Q8NGJ0 315 aa8.69□□□□□ -1.02
SRSF1-204ENST00000581979 FAM104AQ969W3 186 aa8.69□□□□□ -1.02
SRSF1-204ENST00000581979 C2orf88Q9BSF0 95 aa8.69□□□□□ -1.02
SRSF1-204ENST00000581979 CSDC2Q9Y534 153 aaKnown RBP8.69□□□□□ -1.02
SRSF1-204ENST00000581979 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
SRSF1-204ENST00000581979 H3BNG1 76 aa8.68□□□□□ -1.02
SRSF1-204ENST00000581979 TCTAP57738 103 aa8.68□□□□□ -1.02
SRSF1-204ENST00000581979 KMT2AQ03164 3969 aa8.68□□□□□ -1.02
SRSF1-204ENST00000581979 ZNF25P17030 456 aaPredicted RBP8.68□□□□□ -1.02
SRSF1-204ENST00000581979 ANKRD39Q53RE8 183 aa8.68□□□□□ -1.02
SRSF1-204ENST00000581979 TRAV10A0A0B4J240 114 aa8.67□□□□□ -1.02
SRSF1-204ENST00000581979 C11orf86A6NJI1 115 aa8.67□□□□□ -1.02
SRSF1-204ENST00000581979 C14orf144Q96I85 54 aa8.67□□□□□ -1.02
SRSF1-204ENST00000581979 A0A0J9YXV3 536 aa8.66□□□□□ -1.02
SRSF1-204ENST00000581979 TMEM262E9PQX1 116 aa8.66□□□□□ -1.02
SRSF1-204ENST00000581979 IGLC3P0DOY3 106 aa8.66□□□□□ -1.02
SRSF1-204ENST00000581979 CDC42SE2Q9NRR3 84 aa8.66□□□□□ -1.02
SRSF1-204ENST00000581979 DDTP30046 118 aa8.66□□□□□ -1.02
SRSF1-204ENST00000581979 MIEN1Q9BRT3 115 aa8.66□□□□□ -1.02
SRSF1-204ENST00000581979 CHAC1Q9BUX1 264 aa8.66□□□□□ -1.02
SRSF1-204ENST00000581979 UQCR10Q9UDW1 63 aa8.66□□□□□ -1.02
SRSF1-204ENST00000581979 NMUP48645 174 aa8.65□□□□□ -1.03
SRSF1-204ENST00000581979 TMEM170BQ5T4T1 132 aa8.65□□□□□ -1.03
SRSF1-204ENST00000581979 LELP1Q5T871 98 aa8.65□□□□□ -1.03
SRSF1-204ENST00000581979 NFE4Q86UQ8 179 aa8.65□□□□□ -1.03
SRSF1-204ENST00000581979 APLNQ9ULZ1 77 aa8.65□□□□□ -1.03
SRSF1-204ENST00000581979 LYPD5Q6UWN5 251 aa8.64□□□□□ -1.03
SRSF1-204ENST00000581979 VPS13DQ5THJ4 4388 aa8.64□□□□□ -1.03
SRSF1-204ENST00000581979 FRAS1Q86XX4 4008 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 IGLV4-60A0A075B6I1 120 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 IGLL5B9A064 214 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 UBE2D1P51668 147 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 HERVK_113P61574 105 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 COX8AP10176 69 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 MPV17L2Q567V2 206 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
SRSF1-204ENST00000581979 IGKV2D-26A0A0A0MRZ7 120 aa8.62□□□□□ -1.03
SRSF1-204ENST00000581979 TRAV13-1A0A0B4J241 112 aa8.62□□□□□ -1.03
SRSF1-204ENST00000581979 A0A1B0GUV1 79 aa8.62□□□□□ -1.03
SRSF1-204ENST00000581979 ZNF22P17026 224 aaPredicted RBP8.62□□□□□ -1.03
SRSF1-204ENST00000581979 TIRAPP58753 221 aa8.62□□□□□ -1.03
SRSF1-204ENST00000581979 RBX1P62877 108 aa8.62□□□□□ -1.03
SRSF1-204ENST00000581979 GEMIN7Q9H840 131 aaKnown RBP8.62□□□□□ -1.03
SRSF1-204ENST00000581979 TRAV8-6A0A0B4J262 113 aa8.61□□□□□ -1.03
SRSF1-204ENST00000581979 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
SRSF1-204ENST00000581979 HNRNPA3P51991 378 aaKnown RBP8.61□□□□□ -1.03
SRSF1-204ENST00000581979 SEC11AP67812 179 aa8.61□□□□□ -1.03
SRSF1-204ENST00000581979 LINC00587B1AMM8 73 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 E9PLD3 99 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms