RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 HIST1H2BAQ96A08 127 aa4.54□□□□□ -1.68
CDK5RAP3-221ENST00000581662 ZFP30Q9Y2G7 519 aa4.54□□□□□ -1.68
CDK5RAP3-221ENST00000581662 MAP1LC3B2A6NCE7 125 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 C19orf71A6NCJ1 209 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 TMEM262E9PQX1 116 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 K7EQM0 130 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 PET100P0DJ07 73 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 CEBPGP53567 150 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 HIGD2BQ4VC39 106 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 LINC00526Q96FQ7 95 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 C12orf57Q99622 126 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 ACTR3CQ9C0K3 210 aaPredicted RBP4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 MAP1LC3BQ9GZQ8 125 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 A0A1W2PNN7 141 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RAB19A4D1S5 217 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 H0Y8G0 127 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RAB5CP51148 216 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 STPG4Q8N801 248 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 FAM104AQ969W3 186 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 PGLYRP4Q96LB8 373 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TRBV25-1A0A075B6N4 114 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IGHV1-24A0A0C4DH33 117 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 SSNA1O43805 119 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 PAGE4O60829 102 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 NDUFS6O75380 124 aaKnown RBP4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 NKX2-5P52952 324 aaPredicted RBP4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 ASB16-AS1Q495Z4 193 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 C11orf52Q96A22 123 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TRAV8-4A0A0B4J246 113 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IFNA7P01567 189 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 P01737 135 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MBP02144 154 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 CCL20P78556 96 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IFITM2Q01629 132 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 SMIM15Q7Z3B0 74 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 GATD1Q8NB37 220 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MBD3L1Q8WWY6 194 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 CNFNQ9BYD5 112 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 BIN3Q9NQY0 253 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TSPAN13O95857 204 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 GIPP09681 153 aaPredicted RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 CTRLP40313 264 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 AKR1C3P42330 323 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RPS10P46783 165 aaKnown RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 FOXA3P55318 350 aaPredicted RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RPL39LQ96EH5 51 aaKnown RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 AP1S3Q96PC3 154 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TMEM243Q9BU79 118 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MED28Q9H204 178 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TRAV1-1A0A0B4J248 108 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 XKRY2A2RUG3 117 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 LINC00862A6NCI5 91 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 SMLR1H3BR10 107 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 NTF3P20783 257 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 UBE2G1P62253 170 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IGKV2-29A2NJV5 120 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MGPP08493 103 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 LINC00614P0C842 121 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 ESDP10768 282 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RPL13AP40429 203 aaKnown RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RPL35P42766 123 aaKnown RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 DEFA1P59665 94 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 PKIAP61925 76 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MEF2BQ02080 365 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TMEM97Q5BJF2 176 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RASL11AQ6T310 242 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 NKX6-2Q9C056 277 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 FXYD6-FXYD2A0A087WZ82 144 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 A0A1B0GV50 99 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 IFITM10A6NMD0 228 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 H0Y9J4 135 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 K7EN84 100 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 TSHBP01222 138 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 CENPWQ5EE01 88 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 SPANXN1Q5VSR9 72 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 LYZL1Q6UWQ5 148 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 BAGE2Q86Y30 109 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 DIRC1Q969H9 104 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 RNASE7Q9H1E1 156 aaKnown RBP4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 NIT2Q9NQR4 276 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 LINC00587B1AMM8 73 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 BCL2P10415 239 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 MT3P25713 68 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 AKR1D1P51857 326 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 CST9LP1Q5W188 147 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 KCNIP4Q6PIL6 250 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 RETNLBQ9BQ08 111 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms