RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 COX19Q49B96 90 aa11.96□□□□□ -0.49
TOP2A-205ENST00000581055 MAP1LC3AQ9H492 121 aa11.96□□□□□ -0.49
TOP2A-205ENST00000581055 PRSS47A8MTI9 375 aa11.95□□□□□ -0.5
TOP2A-205ENST00000581055 FUSP35637 526 aaKnown RBP eCLIP11.95□□□□□ -0.5
TOP2A-205ENST00000581055 IGKV3OR2-268A0A0C4DH90 116 aa11.94□□□□□ -0.5
TOP2A-205ENST00000581055 GCSHP23434 173 aa11.94□□□□□ -0.5
TOP2A-205ENST00000581055 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
TOP2A-205ENST00000581055 CSDC2Q9Y534 153 aaKnown RBP11.94□□□□□ -0.5
TOP2A-205ENST00000581055 KRTAP26-1Q6PEX3 210 aa11.93□□□□□ -0.5
TOP2A-205ENST00000581055 ZNF664Q8N3J9 261 aa11.93□□□□□ -0.5
TOP2A-205ENST00000581055 CDC42SE2Q9NRR3 84 aa11.93□□□□□ -0.5
TOP2A-205ENST00000581055 DYNC1H1Q14204 4646 aaKnown RBP11.92□□□□□ -0.5
TOP2A-205ENST00000581055 LOC389332A0A1B0GUA5 103 aa11.92□□□□□ -0.5
TOP2A-205ENST00000581055 USP17L23D6RBM5 183 aa11.92□□□□□ -0.5
TOP2A-205ENST00000581055 CDK2AP2O75956 126 aa11.92□□□□□ -0.5
TOP2A-205ENST00000581055 TIMM21Q9BVV7 248 aa11.92□□□□□ -0.5
TOP2A-205ENST00000581055 UBE2D4Q9Y2X8 147 aa11.92□□□□□ -0.5
TOP2A-205ENST00000581055 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.91□□□□□ -0.5
TOP2A-205ENST00000581055 MT-ND6P03923 174 aa11.91□□□□□ -0.5
TOP2A-205ENST00000581055 Q8N8P6 123 aa11.9□□□□□ -0.5
TOP2A-205ENST00000581055 CHCHD10Q8WYQ3 142 aaPredicted RBP11.9□□□□□ -0.5
TOP2A-205ENST00000581055 GAGE12HA6NDE8 117 aa11.89□□□□□ -0.51
TOP2A-205ENST00000581055 K7EMI3 77 aa11.89□□□□□ -0.51
TOP2A-205ENST00000581055 SS18Q15532 418 aa11.89□□□□□ -0.51
TOP2A-205ENST00000581055 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
TOP2A-205ENST00000581055 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
TOP2A-205ENST00000581055 LINC00959A0A1B0GUT2 108 aa11.88□□□□□ -0.51
TOP2A-205ENST00000581055 KIAA1644Q3SXP7 199 aa11.88□□□□□ -0.51
TOP2A-205ENST00000581055 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
TOP2A-205ENST00000581055 CCL25O15444 150 aa11.87□□□□□ -0.51
TOP2A-205ENST00000581055 KRTAP10-1P60331 282 aa11.87□□□□□ -0.51
TOP2A-205ENST00000581055 RPL39P62891 51 aaKnown RBP11.87□□□□□ -0.51
TOP2A-205ENST00000581055 ORMDL2Q53FV1 153 aa11.87□□□□□ -0.51
TOP2A-205ENST00000581055 TGIF2-C20orf24A0A0A6YYL0 155 aa11.86□□□□□ -0.51
TOP2A-205ENST00000581055 FABP9Q0Z7S8 132 aa11.86□□□□□ -0.51
TOP2A-205ENST00000581055 MRPL18Q9H0U6 180 aaKnown RBP11.86□□□□□ -0.51
TOP2A-205ENST00000581055 KIAA1109Q2LD37 5005 aa11.85□□□□□ -0.51
TOP2A-205ENST00000581055 C1orf196B1AJZ1 125 aa11.85□□□□□ -0.51
TOP2A-205ENST00000581055 PRSS1P07477 247 aa11.85□□□□□ -0.51
TOP2A-205ENST00000581055 G0S2P27469 103 aa11.85□□□□□ -0.51
TOP2A-205ENST00000581055 IFI27P40305 119 aaPredicted RBP11.85□□□□□ -0.51
TOP2A-205ENST00000581055 XCL1P47992 114 aa11.85□□□□□ -0.51
TOP2A-205ENST00000581055 SLC7A5P1Q8MH63 180 aa11.85□□□□□ -0.51
TOP2A-205ENST00000581055 MRPS36P82909 103 aaKnown RBP11.84□□□□□ -0.51
TOP2A-205ENST00000581055 Q6ZUT4 128 aa11.84□□□□□ -0.51
TOP2A-205ENST00000581055 ALKBH7Q9BT30 221 aaPredicted RBP11.84□□□□□ -0.51
TOP2A-205ENST00000581055 hDV102S1A0JD36 115 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 FOXI1Q12951 378 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 CD164L2Q6UWJ8 174 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 PRSS3P2Q8NHM4 247 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 AP5S1Q9NUS5 200 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 CYSLTR1Q9Y271 337 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 PYGO1Q9Y3Y4 419 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 LRP1BQ9NZR2 4599 aa11.83□□□□□ -0.52
TOP2A-205ENST00000581055 TRAV13-1A0A0B4J241 112 aa11.82□□□□□ -0.52
TOP2A-205ENST00000581055 RNASE13Q5GAN3 156 aaKnown RBP11.82□□□□□ -0.52
TOP2A-205ENST00000581055 C2orf66Q6UXQ4 117 aa11.81□□□□□ -0.52
TOP2A-205ENST00000581055 SMCO4Q9NRQ5 59 aa11.8□□□□□ -0.52
TOP2A-205ENST00000581055 DNAH5Q8TE73 4624 aa11.8□□□□□ -0.52
TOP2A-205ENST00000581055 HERC2O95714 4834 aa11.79□□□□□ -0.52
TOP2A-205ENST00000581055 OPRPNQ99935 248 aaPredicted RBP11.79□□□□□ -0.52
TOP2A-205ENST00000581055 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.78□□□□□ -0.52
TOP2A-205ENST00000581055 IGHV1-58A0A0C4DH39 117 aa11.78□□□□□ -0.52
TOP2A-205ENST00000581055 IFITM10A6NMD0 228 aa11.78□□□□□ -0.52
TOP2A-205ENST00000581055 NPSP0C0P6 89 aa11.78□□□□□ -0.52
TOP2A-205ENST00000581055 CNBPP62633 177 aaKnown RBP11.78□□□□□ -0.52
TOP2A-205ENST00000581055 Q6ZN92 141 aa11.78□□□□□ -0.52
TOP2A-205ENST00000581055 C15orf56Q8N910 161 aa11.78□□□□□ -0.52
TOP2A-205ENST00000581055 FAM104AQ969W3 186 aa11.78□□□□□ -0.52
TOP2A-205ENST00000581055 TMEM141Q96I45 108 aa11.78□□□□□ -0.52
TOP2A-205ENST00000581055 IGLV4-3A0A075B6K6 122 aa11.77□□□□□ -0.53
TOP2A-205ENST00000581055 COX7A2LO14548 114 aa11.77□□□□□ -0.53
TOP2A-205ENST00000581055 MALP21145 153 aa11.77□□□□□ -0.53
TOP2A-205ENST00000581055 LINC01620Q4KN68 170 aa11.77□□□□□ -0.53
TOP2A-205ENST00000581055 FA2HQ7L5A8 372 aa11.77□□□□□ -0.53
TOP2A-205ENST00000581055 YPEL4Q96NS1 127 aa11.77□□□□□ -0.53
TOP2A-205ENST00000581055 GVQW2A0A096LPI5 108 aaPredicted RBP11.76□□□□□ -0.53
TOP2A-205ENST00000581055 LINC01549A6NIU2 74 aa11.76□□□□□ -0.53
TOP2A-205ENST00000581055 XGP55808 180 aa11.76□□□□□ -0.53
TOP2A-205ENST00000581055 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
TOP2A-205ENST00000581055 TEX43Q6ZNM6 134 aa11.76□□□□□ -0.53
TOP2A-205ENST00000581055 C9orf163Q8N9P6 203 aa11.76□□□□□ -0.53
TOP2A-205ENST00000581055 C2orf88Q9BSF0 95 aa11.76□□□□□ -0.53
TOP2A-205ENST00000581055 RYR1P21817 5038 aa11.75□□□□□ -0.53
TOP2A-205ENST00000581055 LINC01546A6NGU7 62 aa11.75□□□□□ -0.53
TOP2A-205ENST00000581055 HIGD2BQ4VC39 106 aa11.75□□□□□ -0.53
TOP2A-205ENST00000581055 CBLN2Q8IUK8 224 aa11.75□□□□□ -0.53
TOP2A-205ENST00000581055 TOMM6Q96B49 74 aa11.75□□□□□ -0.53
TOP2A-205ENST00000581055 VCX2Q9H322 139 aa11.75□□□□□ -0.53
TOP2A-205ENST00000581055 IGIPA6NJ69 53 aa11.74□□□□□ -0.53
TOP2A-205ENST00000581055 Q6ZSA8 131 aa11.74□□□□□ -0.53
TOP2A-205ENST00000581055 APOMO95445 188 aa11.73□□□□□ -0.53
TOP2A-205ENST00000581055 TIMM17AQ99595 171 aa11.73□□□□□ -0.53
TOP2A-205ENST00000581055 FAM30AQ9NZY2 134 aa11.73□□□□□ -0.53
TOP2A-205ENST00000581055 ZNF561-AS1K7EIQ3 104 aa11.72□□□□□ -0.53
TOP2A-205ENST00000581055 ERASQ7Z444 233 aa11.72□□□□□ -0.53
TOP2A-205ENST00000581055 SCGB3A1Q96QR1 104 aa11.72□□□□□ -0.53
TOP2A-205ENST00000581055 IGHV3-64A0A075B6Q5 118 aa11.71□□□□□ -0.53
TOP2A-205ENST00000581055 SLPIP03973 132 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms