RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 I3L3M4 83 aa9.71□□□□□ -0.85
CDK5RAP3-219ENST00000580670 GYPEP15421 78 aa9.71□□□□□ -0.85
CDK5RAP3-219ENST00000580670 KIR2DL4Q99706 377 aa9.71□□□□□ -0.85
CDK5RAP3-219ENST00000580670 COL7A1Q02388 2944 aa9.71□□□□□ -0.86
CDK5RAP3-219ENST00000580670 A0A1W2PPM0 123 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 PHLDA1Q8WV24 401 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 TRAV26-1A0A087WT03 109 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 FCER1GP30273 86 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 UBE2D3P61077 147 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 UBE2D2P62837 147 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 LAGE3Q14657 143 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
CDK5RAP3-219ENST00000580670 PRKDCP78527 4128 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-219ENST00000580670 K7EMI3 77 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 TSHBP01222 138 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 ORMDL2Q53FV1 153 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 LINC00694P0DN24 101 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 ODF1Q14990 250 aa9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-219ENST00000580670 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
CDK5RAP3-219ENST00000580670 STAB2Q8WWQ8 2551 aa9.66□□□□□ -0.86
CDK5RAP3-219ENST00000580670 ATP5LO75964 103 aa9.66□□□□□ -0.86
CDK5RAP3-219ENST00000580670 FABP2P12104 132 aa9.66□□□□□ -0.86
CDK5RAP3-219ENST00000580670 TRAV10A0A0B4J240 114 aa9.65□□□□□ -0.86
CDK5RAP3-219ENST00000580670 NMUP48645 174 aa9.65□□□□□ -0.86
CDK5RAP3-219ENST00000580670 TM2D2Q9BX73 214 aa9.65□□□□□ -0.86
CDK5RAP3-219ENST00000580670 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.87
CDK5RAP3-219ENST00000580670 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.87
CDK5RAP3-219ENST00000580670 A0A096LPF7 62 aa9.64□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TMEM238C9JI98 176 aa9.64□□□□□ -0.87
CDK5RAP3-219ENST00000580670 IGKCP01834 107 aa9.64□□□□□ -0.87
CDK5RAP3-219ENST00000580670 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
CDK5RAP3-219ENST00000580670 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 H3BNG1 76 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TAL2Q16559 108 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 RAB37Q96AX2 223 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 C2orf66Q6UXQ4 117 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
CDK5RAP3-219ENST00000580670 DPM2O94777 84 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 FXYD2P54710 66 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 C20orf203Q8NBC4 194 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TOMM6Q96B49 74 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 NAA38Q9BRA0 125 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 E9PLD3 99 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 PRSS1P07477 247 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 RPL39P62891 51 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 SH2D6Q7Z4S9 175 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 CEND1Q8N111 149 aa9.61□□□□□ -0.87
CDK5RAP3-219ENST00000580670 GCSHP23434 173 aa9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TRBV6-8A0A0A6YYG3 113 aa9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 IGKV2-29A2NJV5 120 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 SCGB3A1Q96QR1 104 aa9.6□□□□□ -0.87
CDK5RAP3-219ENST00000580670 LINC01549A6NIU2 74 aa9.59□□□□□ -0.87
CDK5RAP3-219ENST00000580670 SCGB1A1P11684 91 aa9.59□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TCTAP57738 103 aa9.59□□□□□ -0.87
CDK5RAP3-219ENST00000580670 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
CDK5RAP3-219ENST00000580670 A0A087WX48 190 aa9.58□□□□□ -0.88
CDK5RAP3-219ENST00000580670 F8W1H4 67 aa9.58□□□□□ -0.88
CDK5RAP3-219ENST00000580670 ZC2HC1BQ5TFG8 222 aa9.58□□□□□ -0.88
CDK5RAP3-219ENST00000580670 CHTOPQ9Y3Y2 248 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 IGLL5B9A064 214 aa9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 UBE2L6O14933 153 aa9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 C15orf53Q8NAA6 179 aa9.57□□□□□ -0.88
CDK5RAP3-219ENST00000580670 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 PLNP26678 52 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 CHCHD5Q9BSY4 110 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TTTY13Q9BZ97 58 aa9.56□□□□□ -0.88
CDK5RAP3-219ENST00000580670 LYPD5Q6UWN5 251 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 MAPKAPK5-AS1Q8N8E1 139 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TIMM17AQ99595 171 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 MRPL35Q9NZE8 188 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 UBE2D4Q9Y2X8 147 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 H7C423 109 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 GAGE6Q13070 117 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 LELP1Q5T871 98 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-219ENST00000580670 K7ERJ3 54 aa9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TIRAPP58753 221 aa9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 OPRPNQ99935 248 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 PYGO1Q9Y3Y4 419 aa9.54□□□□□ -0.88
CDK5RAP3-219ENST00000580670 RPL24P83731 157 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms