RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 A0A0J9YY99 117 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 H3BUT2 72 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 LEPROTO15243 131 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 UBE2D1P51668 147 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 MRPS36P82909 103 aaKnown RBP3.26□□□□□ -1.89
NUP85-213ENST00000579838 COX6A2Q02221 97 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 UBE2V1Q13404 147 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 RRN3P1Q2M238 152 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 TMEM170BQ5T4T1 132 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 C9orf66Q5T8R8 295 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 TM2D2Q9BX73 214 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 NHP2Q9NX24 153 aaKnown RBP3.26□□□□□ -1.89
NUP85-213ENST00000579838 A0A1B0GWB2 263 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 A6NDN8 102 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 LINC01549A6NIU2 74 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 J3QQQ9 107 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 DEFB4AO15263 64 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 SPINK8P0C7L1 97 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 VAMP3Q15836 100 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 TAL2Q16559 108 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 C12orf74Q32Q52 190 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 KRTAP24-1Q3LI83 254 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 C10orf126Q8N4M7 172 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 HIST1H4GQ99525 98 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 LITAFQ99732 161 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 VCX2Q9H322 139 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 SPANXA1Q9NS26 97 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 CELA1Q9UNI1 258 aa3.25□□□□□ -1.89
NUP85-213ENST00000579838 SETD2Q9BYW2 2564 aaPredicted RBP3.25□□□□□ -1.89
NUP85-213ENST00000579838 SORL1Q92673 2214 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 TRGV2A0A075B6R0 118 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 A0A0J9YXY3 114 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 TRBV10-1A0A0K0K1A3 114 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 TINCRA0A1B0GVN0 87 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 A0A1W2PPM0 123 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 IGLL5B9A064 214 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 K7EP34 96 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 IGHV3-30P01768 117 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 SMIM13P0DJ93 91 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 IGHV3-30-3P0DP02 117 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 IGHV3-30-5P0DP03 117 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 DEFB130BP0DP73 79 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 DEFB130AP0DP74 79 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 PTTG1IPP53801 180 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 KRTAP10-11P60412 298 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 HERVK_113P61574 105 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 RPL36AP83881 106 aaKnown RBP3.24□□□□□ -1.89
NUP85-213ENST00000579838 GAGE6Q13070 117 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 DEFB135Q30KP9 77 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 PAPPA-AS1Q5QFB9 102 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 KIR2DL5BQ8NHK3 375 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 RPL36ALQ969Q0 106 aaKnown RBP3.24□□□□□ -1.89
NUP85-213ENST00000579838 TIMM21Q9BVV7 248 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 C1QTNF4Q9BXJ3 329 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 SPANXB1Q9NS25 103 aaPredicted RBP3.24□□□□□ -1.89
NUP85-213ENST00000579838 CDKN2A-AS1Q9UH64 79 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 SONP18583 2426 aaKnown RBP3.24□□□□□ -1.89
NUP85-213ENST00000579838 NF1P21359 2839 aa3.24□□□□□ -1.89
NUP85-213ENST00000579838 ACANP16112 2415 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 FN1P02751 2386 aaKnown RBP3.23□□□□□ -1.89
NUP85-213ENST00000579838 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 TRGV4A0A0C4DH28 118 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 IGHV4-28A0A0C4DH34 117 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 TRBV6-4A0A1B0GX49 114 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 LGALS3P17931 250 aaKnown RBP3.23□□□□□ -1.89
NUP85-213ENST00000579838 CRYBA4P53673 196 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 LINC00242Q5T6M2 205 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 FAM222AQ5U5X8 452 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 FAM19A3Q7Z5A8 133 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 Q8NAQ8 132 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 WFDC9Q8NEX5 89 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 RETNQ9HD89 108 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 CDC42SE2Q9NRR3 84 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 CMYA5Q8N3K9 4069 aa3.23□□□□□ -1.89
NUP85-213ENST00000579838 A0A096LPF7 62 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 IGHV1-58A0A0C4DH39 117 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 SMIM1B2RUZ4 78 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 F5H768 121 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 TSPAN13O95857 204 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 IGHV4-30-4P0DP06 118 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 INSL3P51460 131 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 TIRAPP58753 221 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 OXLD1Q5BKU9 147 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 ADAMTSL4-AS1Q5T5F5 129 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 SAMD5Q5TGI4 173 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 SCGB1D4Q6XE38 83 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 DAZ4Q86SG3 579 aaKnown RBP3.22□□□□□ -1.89
NUP85-213ENST00000579838 PRIMA1Q86XR5 153 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 MUSTN1Q8IVN3 82 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 TMEM101Q96IK0 257 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 VSIG2Q96IQ7 327 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 TMEM243Q9BU79 118 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 GTSF1LQ9H1H1 148 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 DAZ3Q9NR90 486 aaKnown RBP3.22□□□□□ -1.89
NUP85-213ENST00000579838 NIPBLQ6KC79 2804 aaeCLIP3.22□□□□□ -1.89
NUP85-213ENST00000579838 WNK1Q9H4A3 2382 aa3.22□□□□□ -1.89
NUP85-213ENST00000579838 TRBV6-8A0A0A6YYG3 113 aa3.21□□□□□ -1.9
NUP85-213ENST00000579838 TRAV13-1A0A0B4J241 112 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms