RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 FOXI1Q12951 378 aa10.1□□□□□ -0.79
CRLF3-203ENST00000578692 RIGQ13278 110 aa10.1□□□□□ -0.79
CRLF3-203ENST00000578692 NUP35Q8NFH5 326 aa10.1□□□□□ -0.79
CRLF3-203ENST00000578692 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
CRLF3-203ENST00000578692 LINC00959A0A1B0GUT2 108 aa10.09□□□□□ -0.79
CRLF3-203ENST00000578692 COX6A2Q02221 97 aa10.09□□□□□ -0.79
CRLF3-203ENST00000578692 FAM74A3Q4VXF1 159 aa10.09□□□□□ -0.79
CRLF3-203ENST00000578692 SPACA4Q8TDM5 124 aa10.09□□□□□ -0.79
CRLF3-203ENST00000578692 ISOC2Q96AB3 205 aa10.09□□□□□ -0.79
CRLF3-203ENST00000578692 GVQW2A0A096LPI5 108 aaPredicted RBP10.08□□□□□ -0.8
CRLF3-203ENST00000578692 CCL25O15444 150 aa10.08□□□□□ -0.8
CRLF3-203ENST00000578692 XCL1P47992 114 aa10.08□□□□□ -0.8
CRLF3-203ENST00000578692 RPL23P62829 140 aaKnown RBP10.08□□□□□ -0.8
CRLF3-203ENST00000578692 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
CRLF3-203ENST00000578692 PKHD1L1Q86WI1 4243 aa10.07□□□□□ -0.8
CRLF3-203ENST00000578692 VCYO14598 125 aa10.07□□□□□ -0.8
CRLF3-203ENST00000578692 SERTAD4-AS1Q5TG53 156 aa10.07□□□□□ -0.8
CRLF3-203ENST00000578692 MRPL52Q86TS9 123 aaKnown RBP10.07□□□□□ -0.8
CRLF3-203ENST00000578692 PRSS3P2Q8NHM4 247 aa10.07□□□□□ -0.8
CRLF3-203ENST00000578692 NAT8BQ9UHF3 227 aa10.07□□□□□ -0.8
CRLF3-203ENST00000578692 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
CRLF3-203ENST00000578692 C7orf77A4D0Y5 90 aa10.06□□□□□ -0.8
CRLF3-203ENST00000578692 SMKR1H3BMG3 65 aa10.06□□□□□ -0.8
CRLF3-203ENST00000578692 PPP1R17O96001 155 aa10.06□□□□□ -0.8
CRLF3-203ENST00000578692 SS18Q15532 418 aa10.06□□□□□ -0.8
CRLF3-203ENST00000578692 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
CRLF3-203ENST00000578692 PLAC8Q9NZF1 115 aa10.06□□□□□ -0.8
CRLF3-203ENST00000578692 ADIRFQ15847 76 aa10.05□□□□□ -0.8
CRLF3-203ENST00000578692 NAT8Q9UHE5 227 aa10.05□□□□□ -0.8
CRLF3-203ENST00000578692 IGHV1-58A0A0C4DH39 117 aa10.04□□□□□ -0.8
CRLF3-203ENST00000578692 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
CRLF3-203ENST00000578692 C9JQL5 133 aa10.04□□□□□ -0.8
CRLF3-203ENST00000578692 FCER1GP30273 86 aa10.04□□□□□ -0.8
CRLF3-203ENST00000578692 SUMO2P61956 95 aaKnown RBP10.04□□□□□ -0.8
CRLF3-203ENST00000578692 MAJINQ3KP22 176 aa10.04□□□□□ -0.8
CRLF3-203ENST00000578692 NRACQ8N912 160 aa10.04□□□□□ -0.8
CRLF3-203ENST00000578692 PEA15Q15121 130 aa10.03□□□□□ -0.8
CRLF3-203ENST00000578692 FAM104BQ5XKR9 115 aa10.03□□□□□ -0.8
CRLF3-203ENST00000578692 CD164L2Q6UWJ8 174 aa10.03□□□□□ -0.8
CRLF3-203ENST00000578692 Q6ZRU5 148 aa10.03□□□□□ -0.8
CRLF3-203ENST00000578692 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
CRLF3-203ENST00000578692 SMIM27A0A1W2PRY6 76 aa10.02□□□□□ -0.8
CRLF3-203ENST00000578692 PPP1R2P9O14990 202 aa10.02□□□□□ -0.8
CRLF3-203ENST00000578692 SRSF3P84103 164 aaKnown RBP10.02□□□□□ -0.8
CRLF3-203ENST00000578692 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.8
CRLF3-203ENST00000578692 C7orf33Q8WU49 177 aa10.02□□□□□ -0.8
CRLF3-203ENST00000578692 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.8
CRLF3-203ENST00000578692 CSDC2Q9Y534 153 aaKnown RBP10.02□□□□□ -0.8
CRLF3-203ENST00000578692 LINC00862A6NCI5 91 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 PHOX2AO14813 284 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 CAMPP49913 170 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 STPG4Q8N801 248 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 SMDT1Q9H4I9 107 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 A0A096LNI7 61 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 C1orf196B1AJZ1 125 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 ZNF561-AS1K7EIQ3 104 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 UBE2D4Q9Y2X8 147 aa10.01□□□□□ -0.81
CRLF3-203ENST00000578692 A0A1B0GW15 77 aa10□□□□□ -0.81
CRLF3-203ENST00000578692 CARD19Q96LW7 228 aa10□□□□□ -0.81
CRLF3-203ENST00000578692 LINC00474Q9P2X8 69 aa10□□□□□ -0.81
CRLF3-203ENST00000578692 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
CRLF3-203ENST00000578692 TRBV24-1A0A075B6N3 115 aa9.99□□□□□ -0.81
CRLF3-203ENST00000578692 CKS2P33552 79 aa9.99□□□□□ -0.81
CRLF3-203ENST00000578692 SYCNQ0VAF6 134 aa9.99□□□□□ -0.81
CRLF3-203ENST00000578692 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
CRLF3-203ENST00000578692 C20orf78Q9BR46 151 aa9.99□□□□□ -0.81
CRLF3-203ENST00000578692 MALP21145 153 aa9.98□□□□□ -0.81
CRLF3-203ENST00000578692 RNASE13Q5GAN3 156 aaKnown RBP9.98□□□□□ -0.81
CRLF3-203ENST00000578692 TRAV13-1A0A0B4J241 112 aa9.97□□□□□ -0.81
CRLF3-203ENST00000578692 COX7A2LO14548 114 aa9.97□□□□□ -0.81
CRLF3-203ENST00000578692 RPL32P62910 135 aaKnown RBP9.97□□□□□ -0.81
CRLF3-203ENST00000578692 TIMM21Q9BVV7 248 aa9.97□□□□□ -0.81
CRLF3-203ENST00000578692 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.82
CRLF3-203ENST00000578692 TCAPO15273 167 aa9.96□□□□□ -0.82
CRLF3-203ENST00000578692 TNFRSF6BO95407 300 aa9.96□□□□□ -0.82
CRLF3-203ENST00000578692 S100A8P05109 93 aa9.96□□□□□ -0.82
CRLF3-203ENST00000578692 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.82
CRLF3-203ENST00000578692 F8W036 122 aa9.95□□□□□ -0.82
CRLF3-203ENST00000578692 MT1HL1P0DM35 61 aa9.95□□□□□ -0.82
CRLF3-203ENST00000578692 HBBP68871 147 aa9.95□□□□□ -0.82
CRLF3-203ENST00000578692 D6R8Y8 96 aa9.94□□□□□ -0.82
CRLF3-203ENST00000578692 Q6ZUT4 128 aa9.94□□□□□ -0.82
CRLF3-203ENST00000578692 C5orf38Q86SI9 138 aa9.94□□□□□ -0.82
CRLF3-203ENST00000578692 PLA2G2DQ9UNK4 145 aa9.94□□□□□ -0.82
CRLF3-203ENST00000578692 A0A1B0GXF2 115 aa9.93□□□□□ -0.82
CRLF3-203ENST00000578692 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
CRLF3-203ENST00000578692 SMIM2Q9BVW6 85 aa9.93□□□□□ -0.82
CRLF3-203ENST00000578692 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
CRLF3-203ENST00000578692 APOMO95445 188 aa9.92□□□□□ -0.82
CRLF3-203ENST00000578692 NPYP01303 97 aa9.92□□□□□ -0.82
CRLF3-203ENST00000578692 PPBPP02775 128 aa9.92□□□□□ -0.82
CRLF3-203ENST00000578692 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
CRLF3-203ENST00000578692 CAMK2N2Q96S95 79 aa9.92□□□□□ -0.82
CRLF3-203ENST00000578692 PTTG1IPP53801 180 aa9.91□□□□□ -0.82
CRLF3-203ENST00000578692 GAGE2BQ13066 116 aa9.91□□□□□ -0.82
CRLF3-203ENST00000578692 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
CRLF3-203ENST00000578692 FAM104AQ969W3 186 aa9.9□□□□□ -0.82
CRLF3-203ENST00000578692 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.82
CRLF3-203ENST00000578692 TMEM136Q6ZRR5 245 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms