RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 LINC00694P0DN24 101 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 PCP4P48539 62 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 MIAQ16674 131 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 LINC00482Q8N8I6 264 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TMEM243Q9BU79 118 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GTSF1LQ9H1H1 148 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 CDKN2A-AS1Q9UH64 79 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 POLQO75417 2590 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 UTP20O75691 2785 aaKnown RBP6.65□□□□□ -1.35
CDK5RAP3-208ENST00000578525 PTPN13Q12923 2485 aa6.65□□□□□ -1.35
CDK5RAP3-208ENST00000578525 IGLV5-39A0A0G2JS06 123 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 H7C423 109 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 J3QR89 54 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 NDUFA1O15239 70 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 LINC00242Q5T6M2 205 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ATP6V0E2Q8NHE4 81 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SMR3AQ99954 134 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ERG28Q9UKR5 140 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 USP9YO00507 2555 aaPredicted RBP6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TRGV4A0A0C4DH28 118 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 A8MZ25 164 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 UBE2L6O14933 153 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TCL1BO95988 128 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 IFITM1P13164 125 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 COX6A2Q02221 97 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SFTA2Q6UW10 78 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SORL1Q92673 2214 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TMEM101Q96IK0 257 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CELSR1Q9NYQ6 3014 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CREBBPQ92793 2442 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 LOC100131303A0A0U1RQF7 123 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SCGB1C2P0DMR2 95 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 FHL2Q14192 279 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ETDBQ3ZM63 59 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 MTURNQ8N3F0 131 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 RNF183Q96D59 192 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ZFYVE26Q68DK2 2539 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SMIM1B2RUZ4 78 aa6.61□□□□□ -1.35
CDK5RAP3-208ENST00000578525 LINC00612Q8N6U2 182 aa6.61□□□□□ -1.35
CDK5RAP3-208ENST00000578525 LRRK2Q5S007 2527 aa6.61□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TRAV13-1A0A0B4J241 112 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 H7C2G1 150 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 PRSS2P07478 247 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 INSL3P51460 131 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CIRBPQ14011 172 aaKnown RBP6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 Q1RN00 199 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 C9orf66Q5T8R8 295 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SMIM9A6NGZ8 99 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 F5H768 121 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 M0QXV9 152 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CRLF1O75462 422 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 Q9H8V8 135 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ZFHX3Q15911 3703 aa6.59□□□□□ -1.36
CDK5RAP3-208ENST00000578525 CELSR2Q9HCU4 2923 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 NPC2P61916 151 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 HERV-K104P63124 156 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 GAGE6Q13070 117 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ATXN8Q156A1 80 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 X6R8D5 127 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ITPR3Q14573 2671 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ANK3Q12955 4377 aaKnown RBP6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TRIAP1O43715 76 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 FOXI1Q12951 378 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TEN1Q86WV5 123 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 LINC00308Q8TCZ7 52 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 PPDPFLQ8WWR9 84 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 COPS9Q8WXC6 57 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ZNF625Q96I27 306 aaPredicted RBP6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SPATA25Q9BR10 227 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 PPDPFQ9H3Y8 114 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ICOSQ9Y6W8 199 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SVEP1Q4LDE5 3571 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ABCA12Q86UK0 2595 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 VPS13CQ709C8 3753 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ZANQ9Y493 2812 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 INAFM1C9JVW0 142 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SLC25A20O43772 301 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 DEFB130BP0DP73 79 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 DEFB130AP0DP74 79 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 RPL13AP40429 203 aaKnown RBP6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 LINC01620Q4KN68 170 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 PRIMA1Q86XR5 153 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 APCP25054 2843 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 CRYBG3Q68DQ2 2970 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TEX15Q9BXT5 2789 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 GAGE12HA6NDE8 117 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 LYRM9A8MSI8 78 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 C9JAW5 83 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 COX6CP09669 75 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms