RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 REG3AQ06141 175 aa8.41□□□□□ -1.06
CCDC57-211ENST00000578187 TRAV9-1A0A075B6T8 112 aa8.4□□□□□ -1.06
CCDC57-211ENST00000578187 PHOX2AO14813 284 aa8.4□□□□□ -1.06
CCDC57-211ENST00000578187 NPYP01303 97 aa8.4□□□□□ -1.06
CCDC57-211ENST00000578187 FGF6P10767 208 aa8.4□□□□□ -1.06
CCDC57-211ENST00000578187 ZNF25P17030 456 aaPredicted RBP8.4□□□□□ -1.06
CCDC57-211ENST00000578187 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
CCDC57-211ENST00000578187 ORMDL3Q8N138 153 aa8.4□□□□□ -1.06
CCDC57-211ENST00000578187 BAALCQ8WXS3 180 aa8.4□□□□□ -1.06
CCDC57-211ENST00000578187 C7orf77A4D0Y5 90 aa8.39□□□□□ -1.07
CCDC57-211ENST00000578187 LECT2O14960 151 aa8.39□□□□□ -1.07
CCDC57-211ENST00000578187 HAMPP81172 84 aa8.39□□□□□ -1.07
CCDC57-211ENST00000578187 AMMECR1LQ6DCA0 310 aa8.39□□□□□ -1.07
CCDC57-211ENST00000578187 KIR2DL4Q99706 377 aa8.39□□□□□ -1.07
CCDC57-211ENST00000578187 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
CCDC57-211ENST00000578187 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.38□□□□□ -1.07
CCDC57-211ENST00000578187 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
CCDC57-211ENST00000578187 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
CCDC57-211ENST00000578187 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
CCDC57-211ENST00000578187 FCER1GP30273 86 aa8.38□□□□□ -1.07
CCDC57-211ENST00000578187 RHEBQ15382 184 aa8.38□□□□□ -1.07
CCDC57-211ENST00000578187 RNASEKQ6P5S7 137 aaKnown RBP8.38□□□□□ -1.07
CCDC57-211ENST00000578187 MRPL52Q86TS9 123 aaKnown RBP8.38□□□□□ -1.07
CCDC57-211ENST00000578187 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
CCDC57-211ENST00000578187 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
CCDC57-211ENST00000578187 TCAPO15273 167 aa8.37□□□□□ -1.07
CCDC57-211ENST00000578187 HLA-DQA1P01909 254 aa8.37□□□□□ -1.07
CCDC57-211ENST00000578187 TMEM136Q6ZRR5 245 aa8.37□□□□□ -1.07
CCDC57-211ENST00000578187 PRELID3AQ96N28 172 aa8.37□□□□□ -1.07
CCDC57-211ENST00000578187 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
CCDC57-211ENST00000578187 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
CCDC57-211ENST00000578187 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
CCDC57-211ENST00000578187 TMEM101Q96IK0 257 aa8.36□□□□□ -1.07
CCDC57-211ENST00000578187 DNAH8Q96JB1 4490 aa8.36□□□□□ -1.07
CCDC57-211ENST00000578187 S100PP25815 95 aa8.35□□□□□ -1.07
CCDC57-211ENST00000578187 C14orf177Q52M58 125 aa8.35□□□□□ -1.07
CCDC57-211ENST00000578187 OR5A1Q8NGJ0 315 aa8.35□□□□□ -1.07
CCDC57-211ENST00000578187 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
CCDC57-211ENST00000578187 USP17L23D6RBM5 183 aa8.34□□□□□ -1.07
CCDC57-211ENST00000578187 SMAGPQ0VAQ4 97 aa8.34□□□□□ -1.07
CCDC57-211ENST00000578187 RPS10P5Q9NQ39 176 aa8.34□□□□□ -1.07
CCDC57-211ENST00000578187 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
CCDC57-211ENST00000578187 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
CCDC57-211ENST00000578187 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
CCDC57-211ENST00000578187 IGKV3OR2-268A0A0C4DH90 116 aa8.33□□□□□ -1.08
CCDC57-211ENST00000578187 NDUFA5Q16718 116 aa8.33□□□□□ -1.08
CCDC57-211ENST00000578187 Q6ZSA8 131 aa8.33□□□□□ -1.08
CCDC57-211ENST00000578187 TMEM18Q96B42 140 aa8.33□□□□□ -1.08
CCDC57-211ENST00000578187 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
CCDC57-211ENST00000578187 MAP1LC3AQ9H492 121 aa8.33□□□□□ -1.08
CCDC57-211ENST00000578187 SNAPINO95295 136 aa8.32□□□□□ -1.08
CCDC57-211ENST00000578187 APOC3P02656 99 aa8.32□□□□□ -1.08
CCDC57-211ENST00000578187 SVBPQ8N300 66 aa8.32□□□□□ -1.08
CCDC57-211ENST00000578187 ZNF664Q8N3J9 261 aa8.32□□□□□ -1.08
CCDC57-211ENST00000578187 CHCHD10Q8WYQ3 142 aaPredicted RBP8.32□□□□□ -1.08
CCDC57-211ENST00000578187 GNB1LQ9BYB4 327 aa8.32□□□□□ -1.08
CCDC57-211ENST00000578187 GAGE12HA6NDE8 117 aa8.31□□□□□ -1.08
CCDC57-211ENST00000578187 RPL39P62891 51 aaKnown RBP8.31□□□□□ -1.08
CCDC57-211ENST00000578187 COX19Q49B96 90 aa8.31□□□□□ -1.08
CCDC57-211ENST00000578187 DGAT2L7PQ6IED9 249 aa8.31□□□□□ -1.08
CCDC57-211ENST00000578187 Q8N8P6 123 aa8.31□□□□□ -1.08
CCDC57-211ENST00000578187 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
CCDC57-211ENST00000578187 PRSS1P07477 247 aa8.3□□□□□ -1.08
CCDC57-211ENST00000578187 Q6ZUT4 128 aa8.3□□□□□ -1.08
CCDC57-211ENST00000578187 SPANXA1Q9NS26 97 aa8.3□□□□□ -1.08
CCDC57-211ENST00000578187 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
CCDC57-211ENST00000578187 K7EMI3 77 aa8.29□□□□□ -1.08
CCDC57-211ENST00000578187 MT-ND6P03923 174 aa8.29□□□□□ -1.08
CCDC57-211ENST00000578187 RAB5AP20339 215 aa8.29□□□□□ -1.08
CCDC57-211ENST00000578187 FOXI1Q12951 378 aa8.29□□□□□ -1.08
CCDC57-211ENST00000578187 KIAA1644Q3SXP7 199 aa8.29□□□□□ -1.08
CCDC57-211ENST00000578187 FAM104AQ969W3 186 aa8.29□□□□□ -1.08
CCDC57-211ENST00000578187 CHAC1Q9BUX1 264 aa8.29□□□□□ -1.08
CCDC57-211ENST00000578187 CCL25O15444 150 aa8.28□□□□□ -1.08
CCDC57-211ENST00000578187 MRPS36P82909 103 aaKnown RBP8.28□□□□□ -1.08
CCDC57-211ENST00000578187 SS18Q15532 418 aa8.28□□□□□ -1.08
CCDC57-211ENST00000578187 LINC01620Q4KN68 170 aa8.28□□□□□ -1.08
CCDC57-211ENST00000578187 SCXQ7RTU7 201 aa8.28□□□□□ -1.08
CCDC57-211ENST00000578187 C15orf56Q8N910 161 aa8.28□□□□□ -1.08
CCDC57-211ENST00000578187 NXT2Q9NPJ8 142 aaKnown RBP8.28□□□□□ -1.08
CCDC57-211ENST00000578187 SRRM2Q9UQ35 2752 aaKnown RBP8.27□□□□□ -1.08
CCDC57-211ENST00000578187 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
CCDC57-211ENST00000578187 XCL1P47992 114 aa8.27□□□□□ -1.09
CCDC57-211ENST00000578187 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
CCDC57-211ENST00000578187 PYGO1Q9Y3Y4 419 aa8.27□□□□□ -1.09
CCDC57-211ENST00000578187 VPS13BQ7Z7G8 4022 aa8.26□□□□□ -1.09
CCDC57-211ENST00000578187 C1orf196B1AJZ1 125 aa8.26□□□□□ -1.09
CCDC57-211ENST00000578187 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
CCDC57-211ENST00000578187 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
CCDC57-211ENST00000578187 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
CCDC57-211ENST00000578187 CD164L2Q6UWJ8 174 aa8.26□□□□□ -1.09
CCDC57-211ENST00000578187 ALKBH7Q9BT30 221 aaPredicted RBP8.26□□□□□ -1.09
CCDC57-211ENST00000578187 DMBT1Q9UGM3 2413 aaPredicted RBP8.26□□□□□ -1.09
CCDC57-211ENST00000578187 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
CCDC57-211ENST00000578187 hDV102S1A0JD36 115 aa8.25□□□□□ -1.09
CCDC57-211ENST00000578187 IFI27P40305 119 aaPredicted RBP8.25□□□□□ -1.09
CCDC57-211ENST00000578187 C9orf163Q8N9P6 203 aa8.25□□□□□ -1.09
CCDC57-211ENST00000578187 YPEL4Q96NS1 127 aa8.25□□□□□ -1.09
CCDC57-211ENST00000578187 IGLV4-3A0A075B6K6 122 aa8.24□□□□□ -1.09
CCDC57-211ENST00000578187 TRAV13-1A0A0B4J241 112 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms