RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 MRPL35Q9NZE8 188 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 ARHGAP21Q5T5U3 1957 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 K7EP13 123 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 DDTP30046 118 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 BTCP35070 178 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 KIR3DS1Q14943 382 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 PATE2Q6UY27 113 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 Q6ZS46 218 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 C11orf52Q96A22 123 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 A0A1B0GX51 115 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 C9JAW5 83 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 CRYGBP07316 175 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 Q6ZVH6 145 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 C20orf203Q8NBC4 194 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 DKK2Q9UBU2 259 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 USP24Q9UPU5 2620 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 SETXQ7Z333 2677 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 TRAV12-1A0A0B4J245 112 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 TINCRA0A1B0GVN0 87 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 IGKV4-1P06312 121 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 XGP55808 180 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 ODF3L2Q3SX64 289 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 LGALS9CQ6DKI2 356 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 CD164L2Q6UWJ8 174 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 Q8N6K4 173 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 PPDPFQ9H3Y8 114 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 CYTL1Q9NRR1 136 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 FOXI1Q12951 378 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 C1orf137Q5JT78 98 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 C1orf158Q8N1D5 194 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 CYYR1Q96J86 154 aa2.16□□□□□ -2.06
SMCHD1-203ENST00000577880 ATRQ13535 2644 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 ARHGAP32A7KAX9 2087 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 TRBV20-1A0A075B6N2 111 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 A4D1N5 150 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 E7EUB6 86 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 EDN2P20800 178 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 MIR7-3HGQ8N6C7 128 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 XAGE1AQ9HD64 81 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 PRO1854Q9UHT4 67 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 ZNF580Q9UK33 172 aa2.15□□□□□ -2.06
SMCHD1-203ENST00000577880 IGLC2P0DOY2 106 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 OCIAD2Q56VL3 154 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 LINC01556Q5JQF7 62 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 LINC01545Q5VT33 79 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 DENND4CQ5VZ89 1909 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 GATA1P15976 413 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 CFAP126Q5VTH2 177 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 TP53TG3Q9ULZ0 132 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 ZFHX3Q15911 3703 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 IGLV9-49A0A0B4J1Y8 123 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 KRTAP9-6A0A140TA67 174 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 SMIM27A0A1W2PRY6 76 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 PDE6GP18545 87 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 C18orf32Q8TCD1 76 aa2.15□□□□□ -2.07
SMCHD1-203ENST00000577880 COL5A1P20908 1838 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 TRBV10-2A0A0K0K1G8 114 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 USP17L23D6RBM5 183 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 C3orf79P0CE67 100 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 LINC01620Q4KN68 170 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 CIRBP-AS1Q8TBR5 109 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 UPK3BQ9BT76 320 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 ZFAND3Q9H8U3 227 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 LAMA3Q16787 3333 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 PLXNB1O43157 2135 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 M0QXV9 152 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 RPL39P62891 51 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 LINC00336Q6ZUF6 198 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 Q6ZUT4 128 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 NEXN-AS1Q8NBZ9 246 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 DHRS4-AS1Q9P1J3 65 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 V9GYV3 84 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 JMJD7-PLA2G4BH0Y9G9 81 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 M0R378 163 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 BAALC-AS2P0C853 105 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 SBSPONQ8IVN8 264 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 C14orf132Q9NPU4 83 aa2.14□□□□□ -2.07
SMCHD1-203ENST00000577880 HRCT1Q6UXD1 115 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 LIMD2Q9BT23 127 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 IGKV2-28A0A075B6P5 120 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 H3BMG7 143 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 IGKV2D-28P01615 120 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 GDF5OSQ5U4N7 250 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 MUSTN1Q8IVN3 82 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 DSCAML1Q8TD84 2053 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 HELZ2Q9BYK8 2649 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 BSNQ9UPA5 3926 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 TET2Q6N021 2002 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 IGLV2-14P01704 120 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 CRIP2P52943 208 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 FAM167A-AS1Q96KT0 104 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 C20orf173Q96LM9 149 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 SPANXDQ9BXN6 97 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 SPEGQ15772 3267 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 IBA57-AS1B1ANH7 110 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 F8WDY8 70 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 K7ERS5 55 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 CFC1BP0CG36 223 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 CFC1P0CG37 223 aa2.13□□□□□ -2.07
SMCHD1-203ENST00000577880 LINC00467Q9BRT7 94 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms