RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 IGLC3P0DOY3 106 aa16.5■□□□□ 0.23
ATPAF1-213ENST00000574428 FGF6P10767 208 aa16.5■□□□□ 0.23
ATPAF1-213ENST00000574428 IGIPA6NJ69 53 aa16.49■□□□□ 0.23
ATPAF1-213ENST00000574428 ODF1Q14990 250 aa16.49■□□□□ 0.23
ATPAF1-213ENST00000574428 ERASQ7Z444 233 aa16.49■□□□□ 0.23
ATPAF1-213ENST00000574428 C14orf144Q96I85 54 aa16.49■□□□□ 0.23
ATPAF1-213ENST00000574428 OPRPNQ99935 248 aaPredicted RBP16.49■□□□□ 0.23
ATPAF1-213ENST00000574428 HSBP1L1C9JCN9 74 aa16.48■□□□□ 0.23
ATPAF1-213ENST00000574428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.48■□□□□ 0.23
ATPAF1-213ENST00000574428 LINC01549A6NIU2 74 aa16.47■□□□□ 0.23
ATPAF1-213ENST00000574428 TMEM262E9PQX1 116 aa16.47■□□□□ 0.23
ATPAF1-213ENST00000574428 H7C423 109 aa16.47■□□□□ 0.23
ATPAF1-213ENST00000574428 AMMECR1LQ6DCA0 310 aa16.47■□□□□ 0.23
ATPAF1-213ENST00000574428 SPANXA1Q9NS26 97 aa16.47■□□□□ 0.23
ATPAF1-213ENST00000574428 LINC00588Q9Y4M8 146 aa16.47■□□□□ 0.23
ATPAF1-213ENST00000574428 TRAV8-6A0A0B4J262 113 aa16.46■□□□□ 0.23
ATPAF1-213ENST00000574428 MRPL52Q86TS9 123 aaKnown RBP16.46■□□□□ 0.23
ATPAF1-213ENST00000574428 WFDC10BQ8IUB3 73 aa16.46■□□□□ 0.23
ATPAF1-213ENST00000574428 CCL18P55774 89 aa16.46■□□□□ 0.22
ATPAF1-213ENST00000574428 Q8N3U1 123 aa16.46■□□□□ 0.22
ATPAF1-213ENST00000574428 TIMM17AQ99595 171 aa16.46■□□□□ 0.22
ATPAF1-213ENST00000574428 UQCR10Q9UDW1 63 aa16.46■□□□□ 0.22
ATPAF1-213ENST00000574428 PYGO1Q9Y3Y4 419 aa16.46■□□□□ 0.22
ATPAF1-213ENST00000574428 MPV17L2Q567V2 206 aa16.45■□□□□ 0.22
ATPAF1-213ENST00000574428 Q6ZN92 141 aa16.45■□□□□ 0.22
ATPAF1-213ENST00000574428 TIMM21Q9BVV7 248 aa16.45■□□□□ 0.22
ATPAF1-213ENST00000574428 IGLV4-3A0A075B6K6 122 aa16.44■□□□□ 0.22
ATPAF1-213ENST00000574428 DGAT2L7PQ6IED9 249 aa16.44■□□□□ 0.22
ATPAF1-213ENST00000574428 FAM104AQ969W3 186 aa16.44■□□□□ 0.22
ATPAF1-213ENST00000574428 TMEM141Q96I45 108 aa16.44■□□□□ 0.22
ATPAF1-213ENST00000574428 STARD9Q9P2P6 4700 aa16.44■□□□□ 0.22
ATPAF1-213ENST00000574428 RNASE13Q5GAN3 156 aaKnown RBP16.43■□□□□ 0.22
ATPAF1-213ENST00000574428 Q6ZUT4 128 aa16.43■□□□□ 0.22
ATPAF1-213ENST00000574428 OR5A1Q8NGJ0 315 aa16.43■□□□□ 0.22
ATPAF1-213ENST00000574428 TCTAP57738 103 aa16.43■□□□□ 0.22
ATPAF1-213ENST00000574428 MRPS16Q9Y3D3 137 aaKnown RBP16.43■□□□□ 0.22
ATPAF1-213ENST00000574428 IGLV4-60A0A075B6I1 120 aa16.42■□□□□ 0.22
ATPAF1-213ENST00000574428 RBX1P62877 108 aa16.42■□□□□ 0.22
ATPAF1-213ENST00000574428 SMAGPQ0VAQ4 97 aa16.42■□□□□ 0.22
ATPAF1-213ENST00000574428 ZC2HC1BQ5TFG8 222 aa16.42■□□□□ 0.22
ATPAF1-213ENST00000574428 BAALCQ8WXS3 180 aa16.42■□□□□ 0.22
ATPAF1-213ENST00000574428 TMEM101Q96IK0 257 aa16.42■□□□□ 0.22
ATPAF1-213ENST00000574428 A0A087WX48 190 aa16.41■□□□□ 0.22
ATPAF1-213ENST00000574428 TRAV12-1A0A0B4J245 112 aa16.41■□□□□ 0.22
ATPAF1-213ENST00000574428 ZNF25P17030 456 aaPredicted RBP16.41■□□□□ 0.22
ATPAF1-213ENST00000574428 CSDC2Q9Y534 153 aaKnown RBP16.41■□□□□ 0.22
ATPAF1-213ENST00000574428 TENM2Q9NT68 2774 aa16.41■□□□□ 0.22
ATPAF1-213ENST00000574428 ANKRD39Q53RE8 183 aa16.4■□□□□ 0.22
ATPAF1-213ENST00000574428 MRPL35Q9NZE8 188 aaKnown RBP16.4■□□□□ 0.22
ATPAF1-213ENST00000574428 IGKCP01834 107 aa16.39■□□□□ 0.21
ATPAF1-213ENST00000574428 STPG4Q8N801 248 aa16.39■□□□□ 0.21
ATPAF1-213ENST00000574428 A0A1B0GUV1 79 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 DPM2O94777 84 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 MRPS36P82909 103 aaKnown RBP16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 CDC42SE2Q9NRR3 84 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 TP73-AS1Q9UF72 201 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 IGHV3-30P01768 117 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 IGHV3-33P01772 117 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 IGHV3-30-3P0DP02 117 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 IGHV3-30-5P0DP03 117 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 UBE2DNLQ8IWF7 75 aa16.38■□□□□ 0.21
ATPAF1-213ENST00000574428 NPSP0C0P6 89 aa16.37■□□□□ 0.21
ATPAF1-213ENST00000574428 VCX2Q9H322 139 aa16.37■□□□□ 0.21
ATPAF1-213ENST00000574428 HNRNPA3P51991 378 aaKnown RBP16.36■□□□□ 0.21
ATPAF1-213ENST00000574428 PLECQ15149 4684 aaKnown RBP16.36■□□□□ 0.21
ATPAF1-213ENST00000574428 PAPPA-AS1Q5QFB9 102 aa16.36■□□□□ 0.21
ATPAF1-213ENST00000574428 CASC10Q5T4H9 136 aa16.36■□□□□ 0.21
ATPAF1-213ENST00000574428 UPK3BQ9BT76 320 aa16.36■□□□□ 0.21
ATPAF1-213ENST00000574428 CHTOPQ9Y3Y2 248 aaKnown RBP16.36■□□□□ 0.21
ATPAF1-213ENST00000574428 F8VRH5 84 aa16.35■□□□□ 0.21
ATPAF1-213ENST00000574428 PMVKQ15126 192 aa16.35■□□□□ 0.21
ATPAF1-213ENST00000574428 AMELXQ99217 191 aa16.35■□□□□ 0.21
ATPAF1-213ENST00000574428 CST9LQ9H4G1 147 aa16.35■□□□□ 0.21
ATPAF1-213ENST00000574428 PRSS29PA6NIE9 313 aa16.34■□□□□ 0.21
ATPAF1-213ENST00000574428 ANGP03950 147 aaKnown RBP16.34■□□□□ 0.21
ATPAF1-213ENST00000574428 CTAG1AP78358 180 aa16.34■□□□□ 0.21
ATPAF1-213ENST00000574428 EREGO14944 169 aa16.33■□□□□ 0.21
ATPAF1-213ENST00000574428 PLNP26678 52 aa16.33■□□□□ 0.21
ATPAF1-213ENST00000574428 SLC25A34Q6PIV7 304 aa16.33■□□□□ 0.21
ATPAF1-213ENST00000574428 LYSTQ99698 3801 aa16.33■□□□□ 0.2
ATPAF1-213ENST00000574428 SIVA1O15304 175 aa16.33■□□□□ 0.2
ATPAF1-213ENST00000574428 COX8AP10176 69 aa16.33■□□□□ 0.2
ATPAF1-213ENST00000574428 LINC01556Q5JQF7 62 aa16.33■□□□□ 0.2
ATPAF1-213ENST00000574428 CLPSL2Q6UWE3 100 aa16.33■□□□□ 0.2
ATPAF1-213ENST00000574428 C3orf84H3BNL1 204 aa16.32■□□□□ 0.2
ATPAF1-213ENST00000574428 DNAH10OSP0CZ25 163 aa16.32■□□□□ 0.2
ATPAF1-213ENST00000574428 LINC00269Q8N2A0 174 aa16.32■□□□□ 0.2
ATPAF1-213ENST00000574428 SNHG12Q9BXW3 62 aa16.32■□□□□ 0.2
ATPAF1-213ENST00000574428 IGKV3OR2-268A0A0C4DH90 116 aa16.31■□□□□ 0.2
ATPAF1-213ENST00000574428 KLK12Q9UKR0 248 aa16.31■□□□□ 0.2
ATPAF1-213ENST00000574428 C2orf88Q9BSF0 95 aa16.31■□□□□ 0.2
ATPAF1-213ENST00000574428 Q9H8V8 135 aa16.3■□□□□ 0.2
ATPAF1-213ENST00000574428 M0R143 59 aa16.29■□□□□ 0.2
ATPAF1-213ENST00000574428 TRAV13-1A0A0B4J241 112 aa16.28■□□□□ 0.2
ATPAF1-213ENST00000574428 NMUP48645 174 aa16.27■□□□□ 0.2
ATPAF1-213ENST00000574428 IGLV4-69A0A075B6H9 119 aa16.26■□□□□ 0.19
ATPAF1-213ENST00000574428 IGKV2D-26A0A0A0MRZ7 120 aa16.26■□□□□ 0.19
ATPAF1-213ENST00000574428 REG3AQ06141 175 aa16.26■□□□□ 0.19
ATPAF1-213ENST00000574428 UBE2D1P51668 147 aa16.26■□□□□ 0.19
ATPAF1-213ENST00000574428 A0A0J9YXV3 536 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms