RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 Q6ZUT4 128 aa20.41■□□□□ 0.86
CTDNEP1-208ENST00000573600 ATP6V0E2Q8NHE4 81 aa20.41■□□□□ 0.86
CTDNEP1-208ENST00000573600 SIVA1O15304 175 aa20.4■□□□□ 0.86
CTDNEP1-208ENST00000573600 CHAC1Q9BUX1 264 aa20.4■□□□□ 0.86
CTDNEP1-208ENST00000573600 NBEAL2Q6ZNJ1 2754 aa20.39■□□□□ 0.86
CTDNEP1-208ENST00000573600 TRBV6-8A0A0A6YYG3 113 aa20.39■□□□□ 0.86
CTDNEP1-208ENST00000573600 E9PLD3 99 aa20.39■□□□□ 0.86
CTDNEP1-208ENST00000573600 C11orf68Q9H3H3 251 aaKnown RBP20.39■□□□□ 0.86
CTDNEP1-208ENST00000573600 DNAH3Q8TD57 4116 aa20.39■□□□□ 0.86
CTDNEP1-208ENST00000573600 ANK2Q01484 3957 aa20.38■□□□□ 0.85
CTDNEP1-208ENST00000573600 EREGO14944 169 aa20.38■□□□□ 0.85
CTDNEP1-208ENST00000573600 TMEM170BQ5T4T1 132 aa20.38■□□□□ 0.85
CTDNEP1-208ENST00000573600 KPRPQ5T749 579 aaPredicted RBP20.37■□□□□ 0.85
CTDNEP1-208ENST00000573600 A0A0J9YXV3 536 aa20.36■□□□□ 0.85
CTDNEP1-208ENST00000573600 RNASE13Q5GAN3 156 aaKnown RBP20.36■□□□□ 0.85
CTDNEP1-208ENST00000573600 AMMECR1LQ6DCA0 310 aa20.36■□□□□ 0.85
CTDNEP1-208ENST00000573600 C2orf91Q6ZV80 131 aa20.36■□□□□ 0.85
CTDNEP1-208ENST00000573600 VSIG2Q96IQ7 327 aa20.36■□□□□ 0.85
CTDNEP1-208ENST00000573600 PKD1L1Q8TDX9 2849 aa20.36■□□□□ 0.85
CTDNEP1-208ENST00000573600 F5H768 121 aa20.36■□□□□ 0.85
CTDNEP1-208ENST00000573600 TMEM101Q96IK0 257 aa20.36■□□□□ 0.85
CTDNEP1-208ENST00000573600 OR5A1Q8NGJ0 315 aa20.35■□□□□ 0.85
CTDNEP1-208ENST00000573600 ZNF25P17030 456 aaPredicted RBP20.34■□□□□ 0.85
CTDNEP1-208ENST00000573600 TRAV8-6A0A0B4J262 113 aa20.33■□□□□ 0.84
CTDNEP1-208ENST00000573600 TINCRA0A1B0GVN0 87 aa20.33■□□□□ 0.84
CTDNEP1-208ENST00000573600 A0A0J9YY99 117 aa20.32■□□□□ 0.84
CTDNEP1-208ENST00000573600 ZNF22P17026 224 aaPredicted RBP20.32■□□□□ 0.84
CTDNEP1-208ENST00000573600 C12orf74Q32Q52 190 aa20.32■□□□□ 0.84
CTDNEP1-208ENST00000573600 CDC42SE2Q9NRR3 84 aa20.32■□□□□ 0.84
CTDNEP1-208ENST00000573600 TRAV26-1A0A087WT03 109 aa20.31■□□□□ 0.84
CTDNEP1-208ENST00000573600 UBE2D1P51668 147 aa20.31■□□□□ 0.84
CTDNEP1-208ENST00000573600 K7EIL1 84 aa20.3■□□□□ 0.84
CTDNEP1-208ENST00000573600 CHCHD5Q9BSY4 110 aa20.3■□□□□ 0.84
CTDNEP1-208ENST00000573600 TTTY13Q9BZ97 58 aa20.3■□□□□ 0.84
CTDNEP1-208ENST00000573600 TMEM223A0PJW6 202 aa20.3■□□□□ 0.84
CTDNEP1-208ENST00000573600 HTN3P15516 51 aa20.3■□□□□ 0.84
CTDNEP1-208ENST00000573600 HIGD1BQ9P298 99 aa20.3■□□□□ 0.84
CTDNEP1-208ENST00000573600 PRB2P02812 416 aaPredicted RBP20.29■□□□□ 0.84
CTDNEP1-208ENST00000573600 BATFQ16520 125 aa20.29■□□□□ 0.84
CTDNEP1-208ENST00000573600 HINT1P49773 126 aaPredicted RBP20.28■□□□□ 0.84
CTDNEP1-208ENST00000573600 GAGE6Q13070 117 aa20.28■□□□□ 0.84
CTDNEP1-208ENST00000573600 SPATA25Q9BR10 227 aa20.28■□□□□ 0.84
CTDNEP1-208ENST00000573600 MRPL23Q16540 153 aaKnown RBP20.27■□□□□ 0.84
CTDNEP1-208ENST00000573600 SH2D6Q7Z4S9 175 aa20.27■□□□□ 0.84
CTDNEP1-208ENST00000573600 MAPKAPK5-AS1Q8N8E1 139 aa20.27■□□□□ 0.84
CTDNEP1-208ENST00000573600 TIRAPP58753 221 aa20.27■□□□□ 0.83
CTDNEP1-208ENST00000573600 FAM19A3Q7Z5A8 133 aa20.27■□□□□ 0.83
CTDNEP1-208ENST00000573600 MYMXA0A1B0GTQ4 84 aa20.26■□□□□ 0.83
CTDNEP1-208ENST00000573600 SEC11AP67812 179 aa20.26■□□□□ 0.83
CTDNEP1-208ENST00000573600 MPV17L2Q567V2 206 aa20.26■□□□□ 0.83
CTDNEP1-208ENST00000573600 GEMIN7Q9H840 131 aaKnown RBP20.25■□□□□ 0.83
CTDNEP1-208ENST00000573600 ICOSQ9Y6W8 199 aa20.25■□□□□ 0.83
CTDNEP1-208ENST00000573600 A0A096LPF7 62 aa20.24■□□□□ 0.83
CTDNEP1-208ENST00000573600 DEFB121Q5J5C9 76 aa20.24■□□□□ 0.83
CTDNEP1-208ENST00000573600 A0A0J9YWU9 116 aa20.23■□□□□ 0.83
CTDNEP1-208ENST00000573600 LEPROTO15243 131 aa20.23■□□□□ 0.83
CTDNEP1-208ENST00000573600 TM2D3Q9BRN9 247 aa20.23■□□□□ 0.83
CTDNEP1-208ENST00000573600 HERVK_113P63121 156 aa20.22■□□□□ 0.83
CTDNEP1-208ENST00000573600 HSD52Q0P140 79 aa20.22■□□□□ 0.83
CTDNEP1-208ENST00000573600 KRTAP21-3Q3LHN1 58 aa20.22■□□□□ 0.83
CTDNEP1-208ENST00000573600 BVES-AS1Q5T3Y7 98 aa20.21■□□□□ 0.83
CTDNEP1-208ENST00000573600 IGLV5-45A0A087WSX0 123 aa20.2■□□□□ 0.82
CTDNEP1-208ENST00000573600 ZNF815PA8K554 130 aa20.2■□□□□ 0.82
CTDNEP1-208ENST00000573600 H3BNG1 76 aa20.2■□□□□ 0.82
CTDNEP1-208ENST00000573600 COL5A1-AS1Q5SY13 56 aa20.2■□□□□ 0.82
CTDNEP1-208ENST00000573600 LINC00469Q8N7U9 141 aa20.2■□□□□ 0.82
CTDNEP1-208ENST00000573600 PLEKHB2Q96CS7 222 aa20.2■□□□□ 0.82
CTDNEP1-208ENST00000573600 J3QQQ9 107 aa20.19■□□□□ 0.82
CTDNEP1-208ENST00000573600 A0A1B0GUV1 79 aa20.19■□□□□ 0.82
CTDNEP1-208ENST00000573600 H3BRM9 83 aa20.19■□□□□ 0.82
CTDNEP1-208ENST00000573600 LGALS3P17931 250 aaKnown RBP20.19■□□□□ 0.82
CTDNEP1-208ENST00000573600 LINC00242Q5T6M2 205 aa20.19■□□□□ 0.82
CTDNEP1-208ENST00000573600 TRAV13-1A0A0B4J241 112 aa20.18■□□□□ 0.82
CTDNEP1-208ENST00000573600 IGLV4-60A0A075B6I1 120 aa20.17■□□□□ 0.82
CTDNEP1-208ENST00000573600 Q6ZTC4 211 aa20.17■□□□□ 0.82
CTDNEP1-208ENST00000573600 C11orf45Q8TAV5 145 aa20.17■□□□□ 0.82
CTDNEP1-208ENST00000573600 IGHV1-58A0A0C4DH39 117 aa20.16■□□□□ 0.82
CTDNEP1-208ENST00000573600 TMEM262E9PQX1 116 aa20.16■□□□□ 0.82
CTDNEP1-208ENST00000573600 TSPEAR-AS2P59090 65 aa20.16■□□□□ 0.82
CTDNEP1-208ENST00000573600 CDKN2A-AS1Q9UH64 79 aa20.15■□□□□ 0.82
CTDNEP1-208ENST00000573600 COX6A2Q02221 97 aa20.13■□□□□ 0.81
CTDNEP1-208ENST00000573600 MRAPQ8TCY5 172 aa20.13■□□□□ 0.81
CTDNEP1-208ENST00000573600 IGHV3-64A0A075B6Q5 118 aa20.13■□□□□ 0.81
CTDNEP1-208ENST00000573600 IGHV3-30-3P0DP02 117 aa20.13■□□□□ 0.81
CTDNEP1-208ENST00000573600 TAL2Q16559 108 aa20.13■□□□□ 0.81
CTDNEP1-208ENST00000573600 RBX1P62877 108 aa20.12■□□□□ 0.81
CTDNEP1-208ENST00000573600 LELP1Q5T871 98 aa20.12■□□□□ 0.81
CTDNEP1-208ENST00000573600 SCGB1D4Q6XE38 83 aa20.12■□□□□ 0.81
CTDNEP1-208ENST00000573600 NOTCH1P46531 2555 aa20.11■□□□□ 0.81
CTDNEP1-208ENST00000573600 NANOS2P60321 138 aaKnown RBP20.1■□□□□ 0.81
CTDNEP1-208ENST00000573600 ORAOV1Q8WV07 137 aa20.1■□□□□ 0.81
CTDNEP1-208ENST00000573600 TRAV8-3A0A0A6YYJ7 113 aa20.1■□□□□ 0.81
CTDNEP1-208ENST00000573600 SPINK8P0C7L1 97 aa20.1■□□□□ 0.81
CTDNEP1-208ENST00000573600 DEFB131BA0A096LNP1 70 aa20.07■□□□□ 0.8
CTDNEP1-208ENST00000573600 A0A1B0GV90 55 aa20.06■□□□□ 0.8
CTDNEP1-208ENST00000573600 LYPD5Q6UWN5 251 aa20.05■□□□□ 0.8
CTDNEP1-208ENST00000573600 HIST1H4GQ99525 98 aa20.05■□□□□ 0.8
CTDNEP1-208ENST00000573600 IGKV3OR2-268A0A0C4DH90 116 aa20.05■□□□□ 0.8
CTDNEP1-208ENST00000573600 CEND1Q8N111 149 aa20.05■□□□□ 0.8
CTDNEP1-208ENST00000573600 IGLV5-39A0A0G2JS06 123 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms