RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, human

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS15A-209	ENST00000573554	NRAC	Q8N912	160 aa		10.65	□□□□□ -0.7
RPS15A-209	ENST00000573554	BTF3L4	Q96K17	158 aa		10.65	□□□□□ -0.7
RPS15A-209	ENST00000573554		A0A087WYN8	130 aa		10.64	□□□□□ -0.71
RPS15A-209	ENST00000573554	ADIRF	Q15847	76 aa		10.64	□□□□□ -0.71
RPS15A-209	ENST00000573554	MRPL52	Q86TS9	123 aa	Known RBP	10.64	□□□□□ -0.71
RPS15A-209	ENST00000573554	SPACA4	Q8TDM5	124 aa		10.64	□□□□□ -0.71
RPS15A-209	ENST00000573554	TMEM101	Q96IK0	257 aa		10.64	□□□□□ -0.71
RPS15A-209	ENST00000573554	CDC42SE2	Q9NRR3	84 aa		10.64	□□□□□ -0.71
RPS15A-209	ENST00000573554	NAT8	Q9UHE5	227 aa		10.64	□□□□□ -0.71
RPS15A-209	ENST00000573554	NAT8B	Q9UHF3	227 aa		10.64	□□□□□ -0.71
RPS15A-209	ENST00000573554	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.63	□□□□□ -0.71
RPS15A-209	ENST00000573554	SMIM27	A0A1W2PRY6	76 aa		10.63	□□□□□ -0.71
RPS15A-209	ENST00000573554	CCL25	O15444	150 aa		10.63	□□□□□ -0.71
RPS15A-209	ENST00000573554	XCL1	P47992	114 aa		10.63	□□□□□ -0.71
RPS15A-209	ENST00000573554	COX6A2	Q02221	97 aa		10.63	□□□□□ -0.71
RPS15A-209	ENST00000573554	DPH3	Q96FX2	82 aa		10.63	□□□□□ -0.71
RPS15A-209	ENST00000573554	VCY	O14598	125 aa		10.62	□□□□□ -0.71
RPS15A-209	ENST00000573554	OXT	P01178	125 aa		10.62	□□□□□ -0.71
RPS15A-209	ENST00000573554	PEA15	Q15121	130 aa		10.62	□□□□□ -0.71
RPS15A-209	ENST00000573554	PRSS3P2	Q8NHM4	247 aa		10.62	□□□□□ -0.71
RPS15A-209	ENST00000573554	C7orf77	A4D0Y5	90 aa		10.61	□□□□□ -0.71
RPS15A-209	ENST00000573554	SUMO2	P61956	95 aa	Known RBP	10.61	□□□□□ -0.71
RPS15A-209	ENST00000573554	MRPL51	Q4U2R6	128 aa	Known RBP	10.61	□□□□□ -0.71
RPS15A-209	ENST00000573554	FAM104B	Q5XKR9	115 aa		10.61	□□□□□ -0.71
RPS15A-209	ENST00000573554	ZNF664	Q8N3J9	261 aa		10.61	□□□□□ -0.71
RPS15A-209	ENST00000573554	CAMP	P49913	170 aa		10.6	□□□□□ -0.71
RPS15A-209	ENST00000573554	LINC00526	Q96FQ7	95 aa		10.6	□□□□□ -0.71
RPS15A-209	ENST00000573554	PLAC8	Q9NZF1	115 aa		10.6	□□□□□ -0.71
RPS15A-209	ENST00000573554	PKHD1L1	Q86WI1	4243 aa		10.6	□□□□□ -0.71
RPS15A-209	ENST00000573554	PPP1R17	O96001	155 aa		10.59	□□□□□ -0.71
RPS15A-209	ENST00000573554	SS18	Q15532	418 aa		10.59	□□□□□ -0.71
RPS15A-209	ENST00000573554	SMDT1	Q9H4I9	107 aa		10.59	□□□□□ -0.71
RPS15A-209	ENST00000573554	FAT3	Q8TDW7	4589 aa		10.58	□□□□□ -0.72
RPS15A-209	ENST00000573554	FCER1G	P30273	86 aa		10.58	□□□□□ -0.72
RPS15A-209	ENST00000573554	CD164L2	Q6UWJ8	174 aa		10.58	□□□□□ -0.72
RPS15A-209	ENST00000573554	UBE2D4	Q9Y2X8	147 aa		10.58	□□□□□ -0.72
RPS15A-209	ENST00000573554	CSDC2	Q9Y534	153 aa	Known RBP	10.58	□□□□□ -0.72
RPS15A-209	ENST00000573554	IGHV1-58	A0A0C4DH39	117 aa		10.57	□□□□□ -0.72
RPS15A-209	ENST00000573554	TRBV24-1	A0A075B6N3	115 aa		10.56	□□□□□ -0.72
RPS15A-209	ENST00000573554	IGKV2-24	A0A0C4DH68	120 aa		10.56	□□□□□ -0.72
RPS15A-209	ENST00000573554	LINC00862	A6NCI5	91 aa		10.56	□□□□□ -0.72
RPS15A-209	ENST00000573554	MAJIN	Q3KP22	176 aa		10.56	□□□□□ -0.72
RPS15A-209	ENST00000573554	RNASE13	Q5GAN3	156 aa	Known RBP	10.56	□□□□□ -0.72
RPS15A-209	ENST00000573554	KIR2DL4	Q99706	377 aa		10.56	□□□□□ -0.72
RPS15A-209	ENST00000573554		A0A096LNI7	61 aa		10.55	□□□□□ -0.72
RPS15A-209	ENST00000573554		A0A1B0GW15	77 aa		10.55	□□□□□ -0.72
RPS15A-209	ENST00000573554	PPP1R2P9	O14990	202 aa		10.55	□□□□□ -0.72
RPS15A-209	ENST00000573554	MRPL54	Q6P161	138 aa	Known RBP	10.55	□□□□□ -0.72
RPS15A-209	ENST00000573554	C20orf78	Q9BR46	151 aa		10.55	□□□□□ -0.72
RPS15A-209	ENST00000573554		A0A1B0GXF2	115 aa		10.54	□□□□□ -0.72
RPS15A-209	ENST00000573554	PHOX2A	O14813	284 aa		10.54	□□□□□ -0.72
RPS15A-209	ENST00000573554	TNFRSF6B	O95407	300 aa		10.54	□□□□□ -0.72
RPS15A-209	ENST00000573554	CKS2	P33552	79 aa		10.54	□□□□□ -0.72
RPS15A-209	ENST00000573554	C1orf196	B1AJZ1	125 aa		10.53	□□□□□ -0.72
RPS15A-209	ENST00000573554	RPL32	P62910	135 aa	Known RBP	10.53	□□□□□ -0.72
RPS15A-209	ENST00000573554		Q6ZUT4	128 aa		10.53	□□□□□ -0.72
RPS15A-209	ENST00000573554	STPG4	Q8N801	248 aa		10.53	□□□□□ -0.72
RPS15A-209	ENST00000573554	FAM104A	Q969W3	186 aa		10.53	□□□□□ -0.72
RPS15A-209	ENST00000573554	TIMM21	Q9BVV7	248 aa		10.53	□□□□□ -0.72
RPS15A-209	ENST00000573554		D6R8Y8	96 aa		10.52	□□□□□ -0.73
RPS15A-209	ENST00000573554	HBB	P68871	147 aa		10.52	□□□□□ -0.73
RPS15A-209	ENST00000573554		Q6ZRU5	148 aa		10.52	□□□□□ -0.73
RPS15A-209	ENST00000573554	CARD19	Q96LW7	228 aa		10.52	□□□□□ -0.73
RPS15A-209	ENST00000573554	TRAV13-1	A0A0B4J241	112 aa		10.51	□□□□□ -0.73
RPS15A-209	ENST00000573554	ZNF561-AS1	K7EIQ3	104 aa		10.51	□□□□□ -0.73
RPS15A-209	ENST00000573554	NPY	P01303	97 aa		10.51	□□□□□ -0.73
RPS15A-209	ENST00000573554	RPL39	P62891	51 aa	Known RBP	10.51	□□□□□ -0.73
RPS15A-209	ENST00000573554	SYCN	Q0VAF6	134 aa		10.51	□□□□□ -0.73
RPS15A-209	ENST00000573554	SMAGP	Q0VAQ4	97 aa		10.51	□□□□□ -0.73
RPS15A-209	ENST00000573554	SERTAD4-AS1	Q5TG53	156 aa		10.51	□□□□□ -0.73
RPS15A-209	ENST00000573554	IGLV4-69	A0A075B6H9	119 aa		10.5	□□□□□ -0.73
RPS15A-209	ENST00000573554		F8W036	122 aa		10.5	□□□□□ -0.73
RPS15A-209	ENST00000573554	COX7A2L	O14548	114 aa		10.5	□□□□□ -0.73
RPS15A-209	ENST00000573554	S100A8	P05109	93 aa		10.5	□□□□□ -0.73
RPS15A-209	ENST00000573554	MT1HL1	P0DM35	61 aa		10.5	□□□□□ -0.73
RPS15A-209	ENST00000573554	TMEM18	Q96B42	140 aa		10.5	□□□□□ -0.73
RPS15A-209	ENST00000573554	SMIM2	Q9BVW6	85 aa		10.5	□□□□□ -0.73
RPS15A-209	ENST00000573554	MAL	P21145	153 aa		10.49	□□□□□ -0.73
RPS15A-209	ENST00000573554	C5orf38	Q86SI9	138 aa		10.49	□□□□□ -0.73
RPS15A-209	ENST00000573554	C7orf33	Q8WU49	177 aa		10.49	□□□□□ -0.73
RPS15A-209	ENST00000573554	OPRPN	Q99935	248 aa	Predicted RBP	10.49	□□□□□ -0.73
RPS15A-209	ENST00000573554	TCAP	O15273	167 aa		10.48	□□□□□ -0.73
RPS15A-209	ENST00000573554	LINC00474	Q9P2X8	69 aa		10.48	□□□□□ -0.73
RPS15A-209	ENST00000573554	PPBP	P02775	128 aa		10.47	□□□□□ -0.73
RPS15A-209	ENST00000573554	PRR3	P79522	188 aa	Known RBP	10.46	□□□□□ -0.73
RPS15A-209	ENST00000573554	ATP5L2	Q7Z4Y8	100 aa		10.46	□□□□□ -0.73
RPS15A-209	ENST00000573554	PTTG1IP	P53801	180 aa		10.45	□□□□□ -0.74
RPS15A-209	ENST00000573554	TMEM136	Q6ZRR5	245 aa		10.45	□□□□□ -0.74
RPS15A-209	ENST00000573554	ORMDL3	Q8N138	153 aa		10.45	□□□□□ -0.74
RPS15A-209	ENST00000573554	SPANXA1	Q9NS26	97 aa		10.45	□□□□□ -0.74
RPS15A-209	ENST00000573554	PKIG	Q9Y2B9	76 aa		10.45	□□□□□ -0.74
RPS15A-209	ENST00000573554	LOC107984640	A0A0U1RRK4	108 aa		10.44	□□□□□ -0.74
RPS15A-209	ENST00000573554	MRPS36	P82909	103 aa	Known RBP	10.44	□□□□□ -0.74
RPS15A-209	ENST00000573554	C2orf48	Q96LS8	159 aa		10.44	□□□□□ -0.74
RPS15A-209	ENST00000573554	PRELID3A	Q96N28	172 aa		10.44	□□□□□ -0.74
RPS15A-209	ENST00000573554	CAMK2N2	Q96S95	79 aa		10.44	□□□□□ -0.74
RPS15A-209	ENST00000573554	HMCN2	Q8NDA2	5059 aa		10.43	□□□□□ -0.74
RPS15A-209	ENST00000573554	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.43	□□□□□ -0.74
RPS15A-209	ENST00000573554	GAGE2B	Q13066	116 aa		10.43	□□□□□ -0.74
RPS15A-209	ENST00000573554		A0A1W2PNN7	141 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms