RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 NAT8BQ9UHF3 227 aa6.17□□□□□ -1.42
NPLOC4-212ENST00000573328 A0A087WYN8 130 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 IGKV2-24A0A0C4DH68 120 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 PPP1R17O96001 155 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 ESDP10768 282 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 COX6A2Q02221 97 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 SPACA4Q8TDM5 124 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 KIR2DL4Q99706 377 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 NAT8Q9UHE5 227 aa6.16□□□□□ -1.42
NPLOC4-212ENST00000573328 GVQW2A0A096LPI5 108 aaPredicted RBP6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 VCYO14598 125 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 OXTP01178 125 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 CAMPP49913 170 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 SUMO2P61956 95 aaKnown RBP6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 SMAGPQ0VAQ4 97 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 FOXI1Q12951 378 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 CIRBPQ14011 172 aaKnown RBP6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 PEA15Q15121 130 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 MAJINQ3KP22 176 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 C7orf33Q8WU49 177 aa6.15□□□□□ -1.42
NPLOC4-212ENST00000573328 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
NPLOC4-212ENST00000573328 IGHV1-58A0A0C4DH39 117 aa6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 PPP1R2P9O14990 202 aa6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 HNRNPA3P51991 378 aaKnown RBP6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 MRPL52Q86TS9 123 aaKnown RBP6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 ZNF664Q8N3J9 261 aa6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 CDC42SE2Q9NRR3 84 aa6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
NPLOC4-212ENST00000573328 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 ZNF561-AS1K7EIQ3 104 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 MALP21145 153 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 CKS2P33552 79 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 MRPL51Q4U2R6 128 aaKnown RBP6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 FAM104BQ5XKR9 115 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 MRPL54Q6P161 138 aaKnown RBP6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 CD164L2Q6UWJ8 174 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 NRACQ8N912 160 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 PRSS3P2Q8NHM4 247 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 TMEM18Q96B42 140 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 LINC00526Q96FQ7 95 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
NPLOC4-212ENST00000573328 A0A1B0GW15 77 aa6.12□□□□□ -1.43
NPLOC4-212ENST00000573328 SMIM27A0A1W2PRY6 76 aa6.12□□□□□ -1.43
NPLOC4-212ENST00000573328 C9JQL5 133 aa6.12□□□□□ -1.43
NPLOC4-212ENST00000573328 PHOX2AO14813 284 aa6.12□□□□□ -1.43
NPLOC4-212ENST00000573328 S100A8P05109 93 aa6.12□□□□□ -1.43
NPLOC4-212ENST00000573328 SRSF3P84103 164 aaKnown RBP6.12□□□□□ -1.43
NPLOC4-212ENST00000573328 STPG4Q8N801 248 aa6.12□□□□□ -1.43
NPLOC4-212ENST00000573328 SMDT1Q9H4I9 107 aa6.12□□□□□ -1.43
NPLOC4-212ENST00000573328 A0A096LNI7 61 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 TRAV13-1A0A0B4J241 112 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 LINC00862A6NCI5 91 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 C1orf196B1AJZ1 125 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 F8W036 122 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 COX7A2LO14548 114 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 HBBP68871 147 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 SERTAD4-AS1Q5TG53 156 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 Q6ZUT4 128 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 UBE2D4Q9Y2X8 147 aa6.11□□□□□ -1.43
NPLOC4-212ENST00000573328 D6R8Y8 96 aa6.1□□□□□ -1.43
NPLOC4-212ENST00000573328 TCAPO15273 167 aa6.1□□□□□ -1.43
NPLOC4-212ENST00000573328 TNFRSF6BO95407 300 aa6.1□□□□□ -1.43
NPLOC4-212ENST00000573328 SYCNQ0VAF6 134 aa6.1□□□□□ -1.43
NPLOC4-212ENST00000573328 C20orf78Q9BR46 151 aa6.1□□□□□ -1.43
NPLOC4-212ENST00000573328 LINC00474Q9P2X8 69 aa6.1□□□□□ -1.43
NPLOC4-212ENST00000573328 APOMO95445 188 aa6.09□□□□□ -1.43
NPLOC4-212ENST00000573328 RPL39P62891 51 aaKnown RBP6.09□□□□□ -1.43
NPLOC4-212ENST00000573328 Q6ZRU5 148 aa6.09□□□□□ -1.43
NPLOC4-212ENST00000573328 CAMK2N2Q96S95 79 aa6.09□□□□□ -1.43
NPLOC4-212ENST00000573328 SMIM2Q9BVW6 85 aa6.09□□□□□ -1.43
NPLOC4-212ENST00000573328 CSDC2Q9Y534 153 aaKnown RBP6.09□□□□□ -1.43
NPLOC4-212ENST00000573328 IGLV4-69A0A075B6H9 119 aa6.08□□□□□ -1.44
NPLOC4-212ENST00000573328 NPYP01303 97 aa6.08□□□□□ -1.44
NPLOC4-212ENST00000573328 C5orf38Q86SI9 138 aa6.08□□□□□ -1.44
NPLOC4-212ENST00000573328 TIMM21Q9BVV7 248 aa6.08□□□□□ -1.44
NPLOC4-212ENST00000573328 TRBV24-1A0A075B6N3 115 aa6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 LOC107984640A0A0U1RRK4 108 aa6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 PPBPP02775 128 aa6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 RPL32P62910 135 aaKnown RBP6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 RPL18AQ02543 176 aaKnown RBP6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 SPAG11BQ08648 103 aa6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 GAGE2BQ13066 116 aa6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 ORMDL3Q8N138 153 aa6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 PLA2G2DQ9UNK4 145 aa6.07□□□□□ -1.44
NPLOC4-212ENST00000573328 A0A1B0GXF2 115 aa6.06□□□□□ -1.44
NPLOC4-212ENST00000573328 IFITM10A6NMD0 228 aa6.06□□□□□ -1.44
NPLOC4-212ENST00000573328 RAB5AP20339 215 aa6.06□□□□□ -1.44
NPLOC4-212ENST00000573328 PTTG1IPP53801 180 aa6.06□□□□□ -1.44
NPLOC4-212ENST00000573328 RAB14P61106 215 aa6.06□□□□□ -1.44
NPLOC4-212ENST00000573328 ATP5L2Q7Z4Y8 100 aa6.06□□□□□ -1.44
NPLOC4-212ENST00000573328 PRELID3AQ96N28 172 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms