RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 DEFA6Q01524 100 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 GAGE1Q13065 139 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 GAGE4Q13068 117 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 GAGE5Q13069 117 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 GAGE13Q4V321 117 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 SLC25A34Q6PIV7 304 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 SH2D6Q7Z4S9 175 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 NFE4Q86UQ8 179 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 PHLDA1Q8WV24 401 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-214ENST00000568917 VCX2Q9H322 139 aa6.59□□□□□ -1.35
CNOT1-214ENST00000568917 ZNF25P17030 456 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-214ENST00000568917 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-214ENST00000568917 ZC2HC1BQ5TFG8 222 aa6.58□□□□□ -1.36
CNOT1-214ENST00000568917 SBSPONQ8IVN8 264 aa6.58□□□□□ -1.36
CNOT1-214ENST00000568917 TMEM243Q9BU79 118 aa6.58□□□□□ -1.36
CNOT1-214ENST00000568917 MRPS16Q9Y3D3 137 aaKnown RBP6.58□□□□□ -1.36
CNOT1-214ENST00000568917 TRBV6-8A0A0A6YYG3 113 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 IGHV3-38A0A0C4DH36 116 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 H3BNG1 76 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 SIVA1O15304 175 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 HERVK_113P61574 105 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 LCE1DQ5T752 114 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 NTM-AS1Q6ZSK4 140 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 SPATA25Q9BR10 227 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 C2orf88Q9BSF0 95 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 COL6A5A8TX70 2615 aa6.57□□□□□ -1.36
CNOT1-214ENST00000568917 IGLV4-69A0A075B6H9 119 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 C11orf86A6NJI1 115 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 KRTAP9-7A8MTY7 169 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 UBE2L6O14933 153 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 GYPEP15421 78 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 HNRNPA3P51991 378 aaKnown RBP6.56□□□□□ -1.36
CNOT1-214ENST00000568917 SEC11AP67812 179 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 BOD1L2Q8IYS8 172 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 STPG4Q8N801 248 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 ATP6V0E2Q8NHE4 81 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 C14orf144Q96I85 54 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 CELA1Q9UNI1 258 aa6.56□□□□□ -1.36
CNOT1-214ENST00000568917 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-214ENST00000568917 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 TINCRA0A1B0GVN0 87 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 IGKV2-29A2NJV5 120 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-214ENST00000568917 E9PLD3 99 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 FGF6P10767 208 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 DGAT2L7PQ6IED9 249 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 FAM19A3Q7Z5A8 133 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 FAM104AQ969W3 186 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 TMEM101Q96IK0 257 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 TM2D3Q9BRN9 247 aa6.55□□□□□ -1.36
CNOT1-214ENST00000568917 DEFB4AO15263 64 aa6.54□□□□□ -1.36
CNOT1-214ENST00000568917 MRPL23Q16540 153 aaKnown RBP6.54□□□□□ -1.36
CNOT1-214ENST00000568917 AMMECR1LQ6DCA0 310 aa6.54□□□□□ -1.36
CNOT1-214ENST00000568917 DEFB104AQ8WTQ1 72 aa6.54□□□□□ -1.36
CNOT1-214ENST00000568917 A0A1B0GUV1 79 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 F5H768 121 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 M0R143 59 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 TIRAPP58753 221 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 C12orf74Q32Q52 190 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 VSIG2Q96IQ7 327 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 CHAC1Q9BUX1 264 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 CDC42SE2Q9NRR3 84 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 HIGD1BQ9P298 99 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
CNOT1-214ENST00000568917 K7EIL1 84 aa6.52□□□□□ -1.37
CNOT1-214ENST00000568917 NMUP48645 174 aa6.52□□□□□ -1.37
CNOT1-214ENST00000568917 UBE2D1P51668 147 aa6.52□□□□□ -1.37
CNOT1-214ENST00000568917 HERVK_113P63121 156 aa6.52□□□□□ -1.37
CNOT1-214ENST00000568917 KRTAP21-3Q3LHN1 58 aa6.52□□□□□ -1.37
CNOT1-214ENST00000568917 Q6ZUT4 128 aa6.52□□□□□ -1.37
CNOT1-214ENST00000568917 OPRPNQ99935 248 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-214ENST00000568917 ANK2Q01484 3957 aa6.52□□□□□ -1.37
CNOT1-214ENST00000568917 IGLV5-45A0A087WSX0 123 aa6.51□□□□□ -1.37
CNOT1-214ENST00000568917 IGKV2D-26A0A0A0MRZ7 120 aa6.51□□□□□ -1.37
CNOT1-214ENST00000568917 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
CNOT1-214ENST00000568917 CTAG1AP78358 180 aa6.51□□□□□ -1.37
CNOT1-214ENST00000568917 TMEM170BQ5T4T1 132 aa6.51□□□□□ -1.37
CNOT1-214ENST00000568917 CEMP1Q6PRD7 247 aaPredicted RBP6.51□□□□□ -1.37
CNOT1-214ENST00000568917 RETNQ9HD89 108 aa6.51□□□□□ -1.37
CNOT1-214ENST00000568917 CMYA5Q8N3K9 4069 aa6.51□□□□□ -1.37
CNOT1-214ENST00000568917 TMEM223A0PJW6 202 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 CCL25O15444 150 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 C11orf45Q8TAV5 145 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 PLEKHB2Q96CS7 222 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 CHCHD5Q9BSY4 110 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 SNHG12Q9BXW3 62 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 DNAH3Q8TD57 4116 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 PKD1L1Q8TDX9 2849 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 A0A0J9YWU9 116 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 A0A0J9YXV3 536 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 A0A0J9YY99 117 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 MYMXA0A1B0GTQ4 84 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 H3BRM9 83 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 LEPROTO15243 131 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 LELP1Q5T871 98 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 C2orf91Q6ZV80 131 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 PCP2Q8IVA1 136 aa6.5□□□□□ -1.37
CNOT1-214ENST00000568917 GEMIN7Q9H840 131 aaKnown RBP6.5□□□□□ -1.37
CNOT1-214ENST00000568917 A0A096LPF7 62 aa6.49□□□□□ -1.37
CNOT1-214ENST00000568917 TRAV8-6A0A0B4J262 113 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms