RNA–Protein interactions for RNA: ENST00000568139.5

CLK3-221, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-221ENST00000568139 LOC107984640A0A0U1RRK4 108 aa10.79□□□□□ -0.68
CLK3-221ENST00000568139 A0A1W2PNN7 141 aa10.79□□□□□ -0.68
CLK3-221ENST00000568139 CAMPP49913 170 aa10.79□□□□□ -0.68
CLK3-221ENST00000568139 GAGE2BQ13066 116 aa10.79□□□□□ -0.68
CLK3-221ENST00000568139 FAM210AQ96ND0 272 aa10.79□□□□□ -0.68
CLK3-221ENST00000568139 CDC42SE2Q9NRR3 84 aa10.79□□□□□ -0.68
CLK3-221ENST00000568139 K7EN84 100 aa10.78□□□□□ -0.68
CLK3-221ENST00000568139 TSHBP01222 138 aa10.78□□□□□ -0.68
CLK3-221ENST00000568139 BCL2P10415 239 aa10.78□□□□□ -0.68
CLK3-221ENST00000568139 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
CLK3-221ENST00000568139 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
CLK3-221ENST00000568139 ISOC2Q96AB3 205 aa10.78□□□□□ -0.68
CLK3-221ENST00000568139 LPAP08519 4548 aa10.77□□□□□ -0.68
CLK3-221ENST00000568139 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.69
CLK3-221ENST00000568139 PSORS1C2Q9UIG4 136 aa10.77□□□□□ -0.69
CLK3-221ENST00000568139 IGLV4-69A0A075B6H9 119 aa10.76□□□□□ -0.69
CLK3-221ENST00000568139 ZNF664Q8N3J9 261 aa10.76□□□□□ -0.69
CLK3-221ENST00000568139 NUP35Q8NFH5 326 aa10.76□□□□□ -0.69
CLK3-221ENST00000568139 MRAP2Q96G30 205 aa10.76□□□□□ -0.69
CLK3-221ENST00000568139 TMEM242Q9NWH2 141 aa10.75□□□□□ -0.69
CLK3-221ENST00000568139 MT-ND6P03923 174 aa10.74□□□□□ -0.69
CLK3-221ENST00000568139 POLR2KP53803 58 aaKnown RBP10.74□□□□□ -0.69
CLK3-221ENST00000568139 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
CLK3-221ENST00000568139 ST20Q9HBF5 79 aa10.74□□□□□ -0.69
CLK3-221ENST00000568139 APOMO95445 188 aa10.73□□□□□ -0.69
CLK3-221ENST00000568139 TAGLN2P37802 199 aaKnown RBP10.73□□□□□ -0.69
CLK3-221ENST00000568139 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
CLK3-221ENST00000568139 C1orf196B1AJZ1 125 aa10.72□□□□□ -0.69
CLK3-221ENST00000568139 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
CLK3-221ENST00000568139 MALP21145 153 aa10.72□□□□□ -0.69
CLK3-221ENST00000568139 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
CLK3-221ENST00000568139 CAMK2N2Q96S95 79 aa10.72□□□□□ -0.69
CLK3-221ENST00000568139 C7orf77A4D0Y5 90 aa10.71□□□□□ -0.69
CLK3-221ENST00000568139 A8MWL6 223 aa10.71□□□□□ -0.69
CLK3-221ENST00000568139 COX7A2LO14548 114 aa10.71□□□□□ -0.69
CLK3-221ENST00000568139 GATCO43716 136 aaKnown RBP10.71□□□□□ -0.69
CLK3-221ENST00000568139 C1orf137Q5JT78 98 aa10.71□□□□□ -0.69
CLK3-221ENST00000568139 FAM231DQ6ZW35 169 aa10.7□□□□□ -0.7
CLK3-221ENST00000568139 PHF5AQ7RTV0 110 aaKnown RBP10.7□□□□□ -0.7
CLK3-221ENST00000568139 CSDC2Q9Y534 153 aaKnown RBP10.7□□□□□ -0.7
CLK3-221ENST00000568139 PRR26Q8N8Z3 221 aa10.69□□□□□ -0.7
CLK3-221ENST00000568139 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
CLK3-221ENST00000568139 RPL18AQ02543 176 aaKnown RBP10.68□□□□□ -0.7
CLK3-221ENST00000568139 RNF151Q2KHN1 245 aa10.68□□□□□ -0.7
CLK3-221ENST00000568139 DIRC1Q969H9 104 aa10.68□□□□□ -0.7
CLK3-221ENST00000568139 IGLV7-43P04211 117 aa10.67□□□□□ -0.7
CLK3-221ENST00000568139 RAB4AP20338 218 aa10.67□□□□□ -0.7
CLK3-221ENST00000568139 CT83Q5H943 113 aa10.67□□□□□ -0.7
CLK3-221ENST00000568139 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
CLK3-221ENST00000568139 UBE2D4Q9Y2X8 147 aa10.67□□□□□ -0.7
CLK3-221ENST00000568139 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
CLK3-221ENST00000568139 BORCS7Q96B45 105 aa10.66□□□□□ -0.7
CLK3-221ENST00000568139 TRAV13-1A0A0B4J241 112 aa10.65□□□□□ -0.7
CLK3-221ENST00000568139 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
CLK3-221ENST00000568139 VCYO14598 125 aa10.65□□□□□ -0.7
CLK3-221ENST00000568139 SMAGPQ0VAQ4 97 aa10.65□□□□□ -0.7
CLK3-221ENST00000568139 RNASE13Q5GAN3 156 aaKnown RBP10.65□□□□□ -0.7
CLK3-221ENST00000568139 H0Y9J4 135 aa10.64□□□□□ -0.71
CLK3-221ENST00000568139 TMEM250H0YL14 139 aa10.64□□□□□ -0.71
CLK3-221ENST00000568139 FCER1GP30273 86 aa10.64□□□□□ -0.71
CLK3-221ENST00000568139 SPAG11BQ08648 103 aa10.64□□□□□ -0.71
CLK3-221ENST00000568139 AMN1Q8IY45 258 aa10.64□□□□□ -0.71
CLK3-221ENST00000568139 HIGD1CA8MV81 97 aa10.63□□□□□ -0.71
CLK3-221ENST00000568139 KRTAP11-1Q8IUC1 163 aa10.63□□□□□ -0.71
CLK3-221ENST00000568139 TSKUQ8WUA8 353 aa10.63□□□□□ -0.71
CLK3-221ENST00000568139 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
CLK3-221ENST00000568139 IGLV1-50A0A075B6I6 118 aa10.62□□□□□ -0.71
CLK3-221ENST00000568139 A0A087WZ39 114 aa10.62□□□□□ -0.71
CLK3-221ENST00000568139 SLC51BQ86UW2 128 aa10.62□□□□□ -0.71
CLK3-221ENST00000568139 OR10D4PQ8NGN7 298 aa10.62□□□□□ -0.71
CLK3-221ENST00000568139 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
CLK3-221ENST00000568139 F8WDY8 70 aa10.61□□□□□ -0.71
CLK3-221ENST00000568139 SMKR1H3BMG3 65 aa10.61□□□□□ -0.71
CLK3-221ENST00000568139 Q6ZUT4 128 aa10.61□□□□□ -0.71
CLK3-221ENST00000568139 NRACQ8N912 160 aa10.61□□□□□ -0.71
CLK3-221ENST00000568139 IMMP2LQ96T52 175 aa10.61□□□□□ -0.71
CLK3-221ENST00000568139 FAM168BA1KXE4 195 aa10.6□□□□□ -0.71
CLK3-221ENST00000568139 PPP1R17O96001 155 aa10.6□□□□□ -0.71
CLK3-221ENST00000568139 KRTAP1-4P0C5Y4 121 aa10.6□□□□□ -0.71
CLK3-221ENST00000568139 SUMO2P61956 95 aaKnown RBP10.6□□□□□ -0.71
CLK3-221ENST00000568139 KIR2DL4Q99706 377 aa10.6□□□□□ -0.71
CLK3-221ENST00000568139 TLX1NBP0CAT3 122 aa10.59□□□□□ -0.71
CLK3-221ENST00000568139 ORAOV1Q8WV07 137 aa10.58□□□□□ -0.72
CLK3-221ENST00000568139 TMEM18Q96B42 140 aa10.58□□□□□ -0.72
CLK3-221ENST00000568139 IGHV3OR16-9A0A0B4J2B5 98 aa10.57□□□□□ -0.72
CLK3-221ENST00000568139 PPP1R2P9O14990 202 aa10.57□□□□□ -0.72
CLK3-221ENST00000568139 NDUFA1O15239 70 aa10.57□□□□□ -0.72
CLK3-221ENST00000568139 TMEM241Q24JQ0 296 aa10.57□□□□□ -0.72
CLK3-221ENST00000568139 C10orf25Q5T742 122 aa10.57□□□□□ -0.72
CLK3-221ENST00000568139 LINC01551Q86U37 167 aa10.57□□□□□ -0.72
CLK3-221ENST00000568139 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
CLK3-221ENST00000568139 OSTCQ9NRP0 149 aa10.57□□□□□ -0.72
CLK3-221ENST00000568139 RIGQ13278 110 aa10.56□□□□□ -0.72
CLK3-221ENST00000568139 KRTAP7-1Q8IUC3 87 aa10.56□□□□□ -0.72
CLK3-221ENST00000568139 MUC2Q02817 5179 aa10.56□□□□□ -0.72
CLK3-221ENST00000568139 CEBPGP53567 150 aa10.55□□□□□ -0.72
CLK3-221ENST00000568139 PRR4Q16378 134 aa10.55□□□□□ -0.72
CLK3-221ENST00000568139 UNQ6190/PRO20217Q6UXQ8 127 aa10.55□□□□□ -0.72
CLK3-221ENST00000568139 FAM19A5Q7Z5A7 132 aaPredicted RBP10.55□□□□□ -0.72
CLK3-221ENST00000568139 TCTE3Q8IZS6 198 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms