RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 UBE2D3P61077 147 aa4.14□□□□□ -1.75
UBFD1-204ENST00000565634 UBE2D2P62837 147 aa4.14□□□□□ -1.75
UBFD1-204ENST00000565634 DNAJC30Q96LL9 226 aa4.14□□□□□ -1.75
UBFD1-204ENST00000565634 AP1S3Q96PC3 154 aa4.14□□□□□ -1.75
UBFD1-204ENST00000565634 TRBV24-1A0A075B6N3 115 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 IGLV5-39A0A0G2JS06 123 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 TRGC1P0CF51 173 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 SMIM17P0DL12 118 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 POLR2KP53803 58 aaKnown RBP4.13□□□□□ -1.75
UBFD1-204ENST00000565634 FABP9Q0Z7S8 132 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 IQCJQ1A5X6 159 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 RASL11AQ6T310 242 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
UBFD1-204ENST00000565634 ATP6V0E2Q8NHE4 81 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 FAM210BQ96KR6 192 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 ALKBH7Q9BT30 221 aaPredicted RBP4.13□□□□□ -1.75
UBFD1-204ENST00000565634 NIT2Q9NQR4 276 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 SMCO4Q9NRQ5 59 aa4.13□□□□□ -1.75
UBFD1-204ENST00000565634 TRBV7-3A0A075B6L6 115 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 IGLV5-52A0A0A0MRZ9 124 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 LOC389332A0A1B0GUA5 103 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 H3BNG1 76 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 APCSP02743 223 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 CKS2P33552 79 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 MRPL23Q16540 153 aaKnown RBP4.12□□□□□ -1.75
UBFD1-204ENST00000565634 ATP5L2Q7Z4Y8 100 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 WFDC10BQ8IUB3 73 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 PRR26Q8N8Z3 221 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 BORCS7Q96B45 105 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 PRADC1Q9BSG0 188 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 GNB1LQ9BYB4 327 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 KRTAP1-5Q9BYS1 174 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 ICOSQ9Y6W8 199 aa4.12□□□□□ -1.75
UBFD1-204ENST00000565634 SDHAF1A6NFY7 115 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 TCAPO15273 167 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 NUPR1O60356 82 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 CIDEAO60543 219 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 TSHBP01222 138 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 TRGC2P03986 189 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 S100PP25815 95 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 RHOHQ15669 191 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 KCNIP4Q6PIL6 250 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 ERASQ7Z444 233 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 FAM104AQ969W3 186 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 PRELID3AQ96N28 172 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 TMEM70Q9BUB7 260 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 TRAPPC1Q9Y5R8 145 aa4.11□□□□□ -1.75
UBFD1-204ENST00000565634 TRAV9-1A0A075B6T8 112 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 TRBV10-1A0A0K0K1A3 114 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 TRBV6-5A0A0K0K1A5 114 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 A0A1B0GW15 77 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 RAB5AP20339 215 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 S100A1P23297 94 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 SRIP30626 198 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 IFI27P40305 119 aaPredicted RBP4.1□□□□□ -1.75
UBFD1-204ENST00000565634 ZC2HC1BQ5TFG8 222 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 SMIM15Q7Z3B0 74 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 C15orf53Q8NAA6 179 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 MRAP2Q96G30 205 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 OPRPNQ99935 248 aaPredicted RBP4.1□□□□□ -1.75
UBFD1-204ENST00000565634 CHCHD7Q9BUK0 85 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 GTSF1LQ9H1H1 148 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 ST20Q9HBF5 79 aa4.1□□□□□ -1.75
UBFD1-204ENST00000565634 LRP2P98164 4655 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.75
UBFD1-204ENST00000565634 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.75
UBFD1-204ENST00000565634 IGHV3-30P01768 117 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 IGHV3-33P01772 117 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 IGHV3-30-3P0DP02 117 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 IGHV3-30-5P0DP03 117 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 PMCHP20382 165 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 RPL39P62891 51 aaKnown RBP4.09□□□□□ -1.75
UBFD1-204ENST00000565634 HERV-K104P63124 156 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 RPL36AP83881 106 aaKnown RBP4.09□□□□□ -1.75
UBFD1-204ENST00000565634 GAGE6Q13070 117 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 DAZ4Q86SG3 579 aaKnown RBP4.09□□□□□ -1.75
UBFD1-204ENST00000565634 ORMDL3Q8N138 153 aa4.09□□□□□ -1.75
UBFD1-204ENST00000565634 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
UBFD1-204ENST00000565634 DAZ3Q9NR90 486 aaKnown RBP4.09□□□□□ -1.75
UBFD1-204ENST00000565634 IGLV4-60A0A075B6I1 120 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 TRBV6-8A0A0A6YYG3 113 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 TRBV27A0A0K0K1C4 114 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 DNAH10OSP0CZ25 163 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 ESDP10768 282 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 LELP1Q5T871 98 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 NIT1Q86X76 327 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 Q8N976 141 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.08□□□□□ -1.76
UBFD1-204ENST00000565634 C18orf32Q8TCD1 76 aa4.08□□□□□ -1.76
UBFD1-204ENST00000565634 MRPS16Q9Y3D3 137 aaKnown RBP4.08□□□□□ -1.76
UBFD1-204ENST00000565634 H7C1H1 209 aa4.07□□□□□ -1.76
UBFD1-204ENST00000565634 I3L3M4 83 aa4.07□□□□□ -1.76
UBFD1-204ENST00000565634 HLA-DQA1P01909 254 aa4.07□□□□□ -1.76
UBFD1-204ENST00000565634 S100A8P05109 93 aa4.07□□□□□ -1.76
UBFD1-204ENST00000565634 CCL18P55774 89 aa4.07□□□□□ -1.76
UBFD1-204ENST00000565634 RPL24P83731 157 aaKnown RBP4.07□□□□□ -1.76
UBFD1-204ENST00000565634 PMCHL1Q16048 86 aa4.07□□□□□ -1.76
UBFD1-204ENST00000565634 MPV17L2Q567V2 206 aa4.07□□□□□ -1.76
UBFD1-204ENST00000565634 RNASE13Q5GAN3 156 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms