RNA–Protein interactions for RNA: ENST00000564067.5

TRAF7-202, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-202ENST00000564067 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.73
TRAF7-202ENST00000564067 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
TRAF7-202ENST00000564067 IFNA1P01562 189 aa10.52□□□□□ -0.73
TRAF7-202ENST00000564067 RPL35P42766 123 aaKnown RBP10.52□□□□□ -0.73
TRAF7-202ENST00000564067 CDC42SE2Q9NRR3 84 aa10.52□□□□□ -0.73
TRAF7-202ENST00000564067 IMMP2LQ96T52 175 aa10.51□□□□□ -0.73
TRAF7-202ENST00000564067 I3L3M4 83 aa10.5□□□□□ -0.73
TRAF7-202ENST00000564067 PMCHP20382 165 aa10.5□□□□□ -0.73
TRAF7-202ENST00000564067 TWIST1Q15672 202 aa10.5□□□□□ -0.73
TRAF7-202ENST00000564067 MRPL52Q86TS9 123 aaKnown RBP10.5□□□□□ -0.73
TRAF7-202ENST00000564067 C9orf62Q8N4C0 152 aa10.5□□□□□ -0.73
TRAF7-202ENST00000564067 SFT2D1Q8WV19 159 aa10.5□□□□□ -0.73
TRAF7-202ENST00000564067 MRAP2Q96G30 205 aa10.5□□□□□ -0.73
TRAF7-202ENST00000564067 OPRPNQ99935 248 aaPredicted RBP10.5□□□□□ -0.73
TRAF7-202ENST00000564067 KRTAP11-1Q8IUC1 163 aa10.49□□□□□ -0.73
TRAF7-202ENST00000564067 RPL39LQ96EH5 51 aaKnown RBP10.49□□□□□ -0.73
TRAF7-202ENST00000564067 F8WDY8 70 aa10.48□□□□□ -0.73
TRAF7-202ENST00000564067 G3V3Q6 166 aa10.48□□□□□ -0.73
TRAF7-202ENST00000564067 UBE2BP63146 152 aa10.48□□□□□ -0.73
TRAF7-202ENST00000564067 SMIM15Q7Z3B0 74 aa10.48□□□□□ -0.73
TRAF7-202ENST00000564067 SMIM12Q96EX1 92 aa10.48□□□□□ -0.73
TRAF7-202ENST00000564067 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
TRAF7-202ENST00000564067 CTRLP40313 264 aa10.47□□□□□ -0.73
TRAF7-202ENST00000564067 KCNRGQ8N5I3 272 aa10.47□□□□□ -0.73
TRAF7-202ENST00000564067 MBD3L1Q8WWY6 194 aa10.47□□□□□ -0.73
TRAF7-202ENST00000564067 CDIP1Q9H305 208 aa10.47□□□□□ -0.73
TRAF7-202ENST00000564067 MRPL35Q9NZE8 188 aaKnown RBP10.47□□□□□ -0.73
TRAF7-202ENST00000564067 FXYD6-FXYD2A0A087WZ82 144 aa10.46□□□□□ -0.73
TRAF7-202ENST00000564067 SPAG11BQ08648 103 aa10.46□□□□□ -0.73
TRAF7-202ENST00000564067 Q5BKY6 102 aa10.46□□□□□ -0.73
TRAF7-202ENST00000564067 CENPWQ5EE01 88 aa10.46□□□□□ -0.73
TRAF7-202ENST00000564067 BIN3Q9NQY0 253 aa10.46□□□□□ -0.73
TRAF7-202ENST00000564067 FAM168BA1KXE4 195 aa10.45□□□□□ -0.74
TRAF7-202ENST00000564067 FAM19A5Q7Z5A7 132 aaPredicted RBP10.45□□□□□ -0.74
TRAF7-202ENST00000564067 RPP21Q9H633 154 aaKnown RBP10.45□□□□□ -0.74
TRAF7-202ENST00000564067 ALG5Q9Y673 324 aa10.45□□□□□ -0.74
TRAF7-202ENST00000564067 TRBV6-5A0A0K0K1A5 114 aa10.44□□□□□ -0.74
TRAF7-202ENST00000564067 GIPP09681 153 aaPredicted RBP10.44□□□□□ -0.74
TRAF7-202ENST00000564067 SMAGPQ0VAQ4 97 aa10.44□□□□□ -0.74
TRAF7-202ENST00000564067 OR10D4PQ8NGN7 298 aa10.44□□□□□ -0.74
TRAF7-202ENST00000564067 C11orf52Q96A22 123 aa10.44□□□□□ -0.74
TRAF7-202ENST00000564067 A0A1B0GV50 99 aa10.43□□□□□ -0.74
TRAF7-202ENST00000564067 ZNF861PO60384 105 aa10.43□□□□□ -0.74
TRAF7-202ENST00000564067 TLX1NBP0CAT3 122 aa10.43□□□□□ -0.74
TRAF7-202ENST00000564067 TPRXLQ17RH7 258 aa10.43□□□□□ -0.74
TRAF7-202ENST00000564067 TMEM241Q24JQ0 296 aa10.43□□□□□ -0.74
TRAF7-202ENST00000564067 FAM213BQ8TBF2 198 aa10.43□□□□□ -0.74
TRAF7-202ENST00000564067 C7orf77A4D0Y5 90 aa10.42□□□□□ -0.74
TRAF7-202ENST00000564067 UMAD1C9J7I0 102 aa10.42□□□□□ -0.74
TRAF7-202ENST00000564067 M0QXV9 152 aa10.42□□□□□ -0.74
TRAF7-202ENST00000564067 TSHBP01222 138 aa10.42□□□□□ -0.74
TRAF7-202ENST00000564067 GNG4P50150 75 aa10.42□□□□□ -0.74
TRAF7-202ENST00000564067 C5orf38Q86SI9 138 aa10.42□□□□□ -0.74
TRAF7-202ENST00000564067 NDUFA1O15239 70 aa10.41□□□□□ -0.74
TRAF7-202ENST00000564067 TMEM242Q9NWH2 141 aa10.41□□□□□ -0.74
TRAF7-202ENST00000564067 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
TRAF7-202ENST00000564067 CCL20P78556 96 aa10.4□□□□□ -0.74
TRAF7-202ENST00000564067 TYMSOSQ8TAI1 123 aa10.4□□□□□ -0.74
TRAF7-202ENST00000564067 ST20Q9HBF5 79 aa10.4□□□□□ -0.74
TRAF7-202ENST00000564067 CYTL1Q9NRR1 136 aa10.4□□□□□ -0.74
TRAF7-202ENST00000564067 TRAV13-1A0A0B4J241 112 aa10.39□□□□□ -0.75
TRAF7-202ENST00000564067 H2AFB1P0C5Y9 115 aa10.39□□□□□ -0.75
TRAF7-202ENST00000564067 CRYGAP11844 174 aa10.39□□□□□ -0.75
TRAF7-202ENST00000564067 LINC01547P58512 204 aaPredicted RBP10.39□□□□□ -0.75
TRAF7-202ENST00000564067 MANBALQ9NQG1 85 aa10.39□□□□□ -0.75
TRAF7-202ENST00000564067 hCG_2014768A0A024R1R8 64 aa10.38□□□□□ -0.75
TRAF7-202ENST00000564067 GAGE2EQ4V326 116 aa10.38□□□□□ -0.75
TRAF7-202ENST00000564067 SMDT1Q9H4I9 107 aa10.38□□□□□ -0.75
TRAF7-202ENST00000564067 GAGE2DQ9UEU5 116 aa10.38□□□□□ -0.75
TRAF7-202ENST00000564067 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
TRAF7-202ENST00000564067 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
TRAF7-202ENST00000564067 NUDT11Q96G61 164 aa10.37□□□□□ -0.75
TRAF7-202ENST00000564067 RAB19A4D1S5 217 aa10.36□□□□□ -0.75
TRAF7-202ENST00000564067 NUPR1O60356 82 aa10.36□□□□□ -0.75
TRAF7-202ENST00000564067 ORAOV1Q8WV07 137 aa10.36□□□□□ -0.75
TRAF7-202ENST00000564067 A0A087X002 238 aa10.35□□□□□ -0.75
TRAF7-202ENST00000564067 POLR2KP53803 58 aaKnown RBP10.35□□□□□ -0.75
TRAF7-202ENST00000564067 FOXA3P55318 350 aaPredicted RBP10.35□□□□□ -0.75
TRAF7-202ENST00000564067 KRTAP7-1Q8IUC3 87 aa10.35□□□□□ -0.75
TRAF7-202ENST00000564067 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
TRAF7-202ENST00000564067 GNG13Q9P2W3 67 aa10.35□□□□□ -0.75
TRAF7-202ENST00000564067 IGLV7-46A0A075B6I9 117 aa10.34□□□□□ -0.75
TRAF7-202ENST00000564067 UBE2D4Q9Y2X8 147 aa10.34□□□□□ -0.75
TRAF7-202ENST00000564067 A0A1B0GVG6 124 aa10.33□□□□□ -0.76
TRAF7-202ENST00000564067 ARPC5O15511 151 aa10.33□□□□□ -0.76
TRAF7-202ENST00000564067 FCER1GP30273 86 aa10.33□□□□□ -0.76
TRAF7-202ENST00000564067 C10orf25Q5T742 122 aa10.33□□□□□ -0.76
TRAF7-202ENST00000564067 UNQ6190/PRO20217Q6UXQ8 127 aa10.33□□□□□ -0.76
TRAF7-202ENST00000564067 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
TRAF7-202ENST00000564067 C6orf48Q9UBA6 75 aa10.33□□□□□ -0.76
TRAF7-202ENST00000564067 PDE6DO43924 150 aa10.32□□□□□ -0.76
TRAF7-202ENST00000564067 RNASE13Q5GAN3 156 aaKnown RBP10.32□□□□□ -0.76
TRAF7-202ENST00000564067 VCYO14598 125 aa10.31□□□□□ -0.76
TRAF7-202ENST00000564067 RPL28P46779 137 aaKnown RBP10.31□□□□□ -0.76
TRAF7-202ENST00000564067 CTAG1AP78358 180 aa10.31□□□□□ -0.76
TRAF7-202ENST00000564067 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
TRAF7-202ENST00000564067 LINC00173Q6ZV60 143 aa10.3□□□□□ -0.76
TRAF7-202ENST00000564067 TMEM18Q96B42 140 aa10.3□□□□□ -0.76
TRAF7-202ENST00000564067 MED9Q9NWA0 146 aa10.3□□□□□ -0.76
TRAF7-202ENST00000564067 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms