RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 GAS8-AS1O95177 125 aa11.51□□□□□ -0.57
NME3-204ENST00000563498 BCL2P10415 239 aa11.51□□□□□ -0.57
NME3-204ENST00000563498 ESDP10768 282 aa11.51□□□□□ -0.57
NME3-204ENST00000563498 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
NME3-204ENST00000563498 SS18Q15532 418 aa11.51□□□□□ -0.57
NME3-204ENST00000563498 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
NME3-204ENST00000563498 CD164L2Q6UWJ8 174 aa11.51□□□□□ -0.57
NME3-204ENST00000563498 RNASE7Q9H1E1 156 aaKnown RBP11.51□□□□□ -0.57
NME3-204ENST00000563498 PMCHP20382 165 aa11.5□□□□□ -0.57
NME3-204ENST00000563498 FOXA3P55318 350 aaPredicted RBP11.5□□□□□ -0.57
NME3-204ENST00000563498 CAMPP49913 170 aa11.49□□□□□ -0.57
NME3-204ENST00000563498 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
NME3-204ENST00000563498 ISOC2Q96AB3 205 aa11.49□□□□□ -0.57
NME3-204ENST00000563498 LOC107984640A0A0U1RRK4 108 aa11.48□□□□□ -0.57
NME3-204ENST00000563498 LOC105371267A0A1B0GV96 52 aa11.48□□□□□ -0.57
NME3-204ENST00000563498 K7EN84 100 aa11.48□□□□□ -0.57
NME3-204ENST00000563498 TAGLN2P37802 199 aaKnown RBP11.48□□□□□ -0.57
NME3-204ENST00000563498 MRAP2Q96G30 205 aa11.48□□□□□ -0.57
NME3-204ENST00000563498 CDC42SE2Q9NRR3 84 aa11.48□□□□□ -0.57
NME3-204ENST00000563498 TSHBP01222 138 aa11.47□□□□□ -0.57
NME3-204ENST00000563498 OCC1Q8TAD7 63 aa11.47□□□□□ -0.57
NME3-204ENST00000563498 GAGE2BQ13066 116 aa11.46□□□□□ -0.57
NME3-204ENST00000563498 ZNF664Q8N3J9 261 aa11.46□□□□□ -0.57
NME3-204ENST00000563498 ST20Q9HBF5 79 aa11.46□□□□□ -0.57
NME3-204ENST00000563498 IGLV4-69A0A075B6H9 119 aa11.45□□□□□ -0.58
NME3-204ENST00000563498 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
NME3-204ENST00000563498 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
NME3-204ENST00000563498 NUP35Q8NFH5 326 aa11.44□□□□□ -0.58
NME3-204ENST00000563498 PSORS1C2Q9UIG4 136 aa11.44□□□□□ -0.58
NME3-204ENST00000563498 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
NME3-204ENST00000563498 C1orf196B1AJZ1 125 aa11.43□□□□□ -0.58
NME3-204ENST00000563498 APOMO95445 188 aa11.43□□□□□ -0.58
NME3-204ENST00000563498 MALP21145 153 aa11.43□□□□□ -0.58
NME3-204ENST00000563498 POLR2KP53803 58 aaKnown RBP11.43□□□□□ -0.58
NME3-204ENST00000563498 C7orf77A4D0Y5 90 aa11.42□□□□□ -0.58
NME3-204ENST00000563498 A8MWL6 223 aa11.42□□□□□ -0.58
NME3-204ENST00000563498 COX7A2LO14548 114 aa11.42□□□□□ -0.58
NME3-204ENST00000563498 MT-ND6P03923 174 aa11.42□□□□□ -0.58
NME3-204ENST00000563498 FAM231DQ6ZW35 169 aa11.42□□□□□ -0.58
NME3-204ENST00000563498 SLC51BQ86UW2 128 aa11.42□□□□□ -0.58
NME3-204ENST00000563498 CAMK2N2Q96S95 79 aa11.42□□□□□ -0.58
NME3-204ENST00000563498 LPAP08519 4548 aa11.41□□□□□ -0.58
NME3-204ENST00000563498 GATCO43716 136 aaKnown RBP11.41□□□□□ -0.58
NME3-204ENST00000563498 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
NME3-204ENST00000563498 CT83Q5H943 113 aa11.41□□□□□ -0.58
NME3-204ENST00000563498 C2orf48Q96LS8 159 aa11.41□□□□□ -0.58
NME3-204ENST00000563498 CSDC2Q9Y534 153 aaKnown RBP11.41□□□□□ -0.58
NME3-204ENST00000563498 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.4□□□□□ -0.58
NME3-204ENST00000563498 BORCS7Q96B45 105 aa11.4□□□□□ -0.58
NME3-204ENST00000563498 C1orf137Q5JT78 98 aa11.39□□□□□ -0.59
NME3-204ENST00000563498 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
NME3-204ENST00000563498 SMAGPQ0VAQ4 97 aa11.38□□□□□ -0.59
NME3-204ENST00000563498 TMEM250H0YL14 139 aa11.37□□□□□ -0.59
NME3-204ENST00000563498 RPL18AQ02543 176 aaKnown RBP11.37□□□□□ -0.59
NME3-204ENST00000563498 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
NME3-204ENST00000563498 DIRC1Q969H9 104 aa11.37□□□□□ -0.59
NME3-204ENST00000563498 A0A1B0GUT8 65 aa11.36□□□□□ -0.59
NME3-204ENST00000563498 VCYO14598 125 aa11.36□□□□□ -0.59
NME3-204ENST00000563498 RAB4AP20338 218 aa11.36□□□□□ -0.59
NME3-204ENST00000563498 CTAG1AP78358 180 aa11.36□□□□□ -0.59
NME3-204ENST00000563498 PHF5AQ7RTV0 110 aaKnown RBP11.36□□□□□ -0.59
NME3-204ENST00000563498 TMA7Q9Y2S6 64 aaKnown RBP11.36□□□□□ -0.59
NME3-204ENST00000563498 UBE2D4Q9Y2X8 147 aa11.36□□□□□ -0.59
NME3-204ENST00000563498 FCER1GP30273 86 aa11.35□□□□□ -0.59
NME3-204ENST00000563498 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
NME3-204ENST00000563498 IGLV7-43P04211 117 aa11.34□□□□□ -0.59
NME3-204ENST00000563498 PRR26Q8N8Z3 221 aa11.34□□□□□ -0.59
NME3-204ENST00000563498 TSKUQ8WUA8 353 aa11.34□□□□□ -0.59
NME3-204ENST00000563498 HIGD1CA8MV81 97 aa11.33□□□□□ -0.6
NME3-204ENST00000563498 PPP1R17O96001 155 aa11.33□□□□□ -0.6
NME3-204ENST00000563498 SPAG11BQ08648 103 aa11.33□□□□□ -0.6
NME3-204ENST00000563498 C5orf38Q86SI9 138 aa11.33□□□□□ -0.6
NME3-204ENST00000563498 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
NME3-204ENST00000563498 OR10D4PQ8NGN7 298 aa11.33□□□□□ -0.6
NME3-204ENST00000563498 OPRPNQ99935 248 aaPredicted RBP11.33□□□□□ -0.6
NME3-204ENST00000563498 F8WDY8 70 aa11.32□□□□□ -0.6
NME3-204ENST00000563498 RNASE13Q5GAN3 156 aaKnown RBP11.32□□□□□ -0.6
NME3-204ENST00000563498 KIR2DL4Q99706 377 aa11.32□□□□□ -0.6
NME3-204ENST00000563498 TIMM21Q9BVV7 248 aa11.32□□□□□ -0.6
NME3-204ENST00000563498 MRPL35Q9NZE8 188 aaKnown RBP11.32□□□□□ -0.6
NME3-204ENST00000563498 H0Y9J4 135 aa11.31□□□□□ -0.6
NME3-204ENST00000563498 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
NME3-204ENST00000563498 IGLV1-50A0A075B6I6 118 aa11.3□□□□□ -0.6
NME3-204ENST00000563498 Q6ZUT4 128 aa11.3□□□□□ -0.6
NME3-204ENST00000563498 NRACQ8N912 160 aa11.3□□□□□ -0.6
NME3-204ENST00000563498 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
NME3-204ENST00000563498 A0A087WZ39 114 aa11.29□□□□□ -0.6
NME3-204ENST00000563498 TCTE3Q8IZS6 198 aa11.29□□□□□ -0.6
NME3-204ENST00000563498 TMEM18Q96B42 140 aa11.29□□□□□ -0.6
NME3-204ENST00000563498 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
NME3-204ENST00000563498 PPP1R2P9O14990 202 aa11.28□□□□□ -0.6
NME3-204ENST00000563498 TLX1NBP0CAT3 122 aa11.28□□□□□ -0.6
NME3-204ENST00000563498 LINC01551Q86U37 167 aa11.28□□□□□ -0.6
NME3-204ENST00000563498 RIGQ13278 110 aa11.27□□□□□ -0.61
NME3-204ENST00000563498 OSTCQ9NRP0 149 aa11.27□□□□□ -0.61
NME3-204ENST00000563498 MUC2Q02817 5179 aa11.27□□□□□ -0.61
NME3-204ENST00000563498 IGHV3OR16-9A0A0B4J2B5 98 aa11.26□□□□□ -0.61
NME3-204ENST00000563498 NDUFA1O15239 70 aa11.26□□□□□ -0.61
NME3-204ENST00000563498 CEBPGP53567 150 aa11.26□□□□□ -0.61
NME3-204ENST00000563498 BLOC1S1P78537 153 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms