RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CST9LQ9H4G1 147 aa9.93□□□□□ -0.82
COMMD4-205ENST00000562310 A0A096LPF7 62 aa9.92□□□□□ -0.82
COMMD4-205ENST00000562310 IGKCP01834 107 aa9.92□□□□□ -0.82
COMMD4-205ENST00000562310 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
COMMD4-205ENST00000562310 AMELXQ99217 191 aa9.92□□□□□ -0.82
COMMD4-205ENST00000562310 C2orf88Q9BSF0 95 aa9.92□□□□□ -0.82
COMMD4-205ENST00000562310 CHCHD5Q9BSY4 110 aa9.92□□□□□ -0.82
COMMD4-205ENST00000562310 MRPL35Q9NZE8 188 aaKnown RBP9.92□□□□□ -0.82
COMMD4-205ENST00000562310 TGP01266 2768 aa9.91□□□□□ -0.82
COMMD4-205ENST00000562310 DEFA6Q01524 100 aa9.91□□□□□ -0.82
COMMD4-205ENST00000562310 Q6ZUT4 128 aa9.91□□□□□ -0.82
COMMD4-205ENST00000562310 TSTD3H0UI37 97 aa9.9□□□□□ -0.82
COMMD4-205ENST00000562310 SPATA45Q537H7 98 aa9.9□□□□□ -0.82
COMMD4-205ENST00000562310 LELP1Q5T871 98 aa9.9□□□□□ -0.82
COMMD4-205ENST00000562310 C15orf53Q8NAA6 179 aa9.9□□□□□ -0.82
COMMD4-205ENST00000562310 PAM16Q9Y3D7 125 aa9.9□□□□□ -0.82
COMMD4-205ENST00000562310 GAGE6Q13070 117 aa9.89□□□□□ -0.83
COMMD4-205ENST00000562310 CEMP1Q6PRD7 247 aaPredicted RBP9.89□□□□□ -0.83
COMMD4-205ENST00000562310 FAM104AQ969W3 186 aa9.89□□□□□ -0.83
COMMD4-205ENST00000562310 OPRPNQ99935 248 aaPredicted RBP9.89□□□□□ -0.83
COMMD4-205ENST00000562310 NFE4Q86UQ8 179 aa9.88□□□□□ -0.83
COMMD4-205ENST00000562310 ZNF664Q8N3J9 261 aa9.88□□□□□ -0.83
COMMD4-205ENST00000562310 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
COMMD4-205ENST00000562310 A0A1B0GUV1 79 aa9.87□□□□□ -0.83
COMMD4-205ENST00000562310 hDV102S1A0JD36 115 aa9.87□□□□□ -0.83
COMMD4-205ENST00000562310 IGLC3P0DOY3 106 aa9.87□□□□□ -0.83
COMMD4-205ENST00000562310 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
COMMD4-205ENST00000562310 ZC2HC1BQ5TFG8 222 aa9.86□□□□□ -0.83
COMMD4-205ENST00000562310 CHAC1Q9BUX1 264 aa9.86□□□□□ -0.83
COMMD4-205ENST00000562310 TRAV8-6A0A0B4J262 113 aa9.85□□□□□ -0.83
COMMD4-205ENST00000562310 C11orf86A6NJI1 115 aa9.85□□□□□ -0.83
COMMD4-205ENST00000562310 SEC11AP67812 179 aa9.85□□□□□ -0.83
COMMD4-205ENST00000562310 MAJINQ3KP22 176 aa9.85□□□□□ -0.83
COMMD4-205ENST00000562310 LYPD5Q6UWN5 251 aa9.85□□□□□ -0.83
COMMD4-205ENST00000562310 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
COMMD4-205ENST00000562310 TMEM262E9PQX1 116 aa9.84□□□□□ -0.83
COMMD4-205ENST00000562310 UBE2D1P51668 147 aa9.84□□□□□ -0.83
COMMD4-205ENST00000562310 HERVK_113P61574 105 aa9.84□□□□□ -0.83
COMMD4-205ENST00000562310 RBX1P62877 108 aa9.84□□□□□ -0.83
COMMD4-205ENST00000562310 RNASE13Q5GAN3 156 aaKnown RBP9.84□□□□□ -0.83
COMMD4-205ENST00000562310 FAM19A3Q7Z5A8 133 aa9.84□□□□□ -0.83
COMMD4-205ENST00000562310 PRO1933Q9H354 126 aa9.84□□□□□ -0.83
COMMD4-205ENST00000562310 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
COMMD4-205ENST00000562310 ANKRD39Q53RE8 183 aa9.82□□□□□ -0.84
COMMD4-205ENST00000562310 MPV17L2Q567V2 206 aa9.82□□□□□ -0.84
COMMD4-205ENST00000562310 STPG4Q8N801 248 aa9.82□□□□□ -0.84
COMMD4-205ENST00000562310 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
COMMD4-205ENST00000562310 IGLV4-60A0A075B6I1 120 aa9.81□□□□□ -0.84
COMMD4-205ENST00000562310 HERVK_113P63121 156 aa9.81□□□□□ -0.84
COMMD4-205ENST00000562310 TMEM170BQ5T4T1 132 aa9.81□□□□□ -0.84
COMMD4-205ENST00000562310 UQCR10Q9UDW1 63 aa9.81□□□□□ -0.84
COMMD4-205ENST00000562310 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
COMMD4-205ENST00000562310 CCL25O15444 150 aa9.8□□□□□ -0.84
COMMD4-205ENST00000562310 ZNF22P17026 224 aaPredicted RBP9.8□□□□□ -0.84
COMMD4-205ENST00000562310 MIEN1Q9BRT3 115 aa9.8□□□□□ -0.84
COMMD4-205ENST00000562310 TRAV13-1A0A0B4J241 112 aa9.79□□□□□ -0.84
COMMD4-205ENST00000562310 E9PLD3 99 aa9.79□□□□□ -0.84
COMMD4-205ENST00000562310 H3BRM9 83 aa9.79□□□□□ -0.84
COMMD4-205ENST00000562310 COX8AP10176 69 aa9.79□□□□□ -0.84
COMMD4-205ENST00000562310 ESRGQ1W209 222 aa9.79□□□□□ -0.84
COMMD4-205ENST00000562310 HUWE1Q7Z6Z7 4374 aaKnown RBP9.79□□□□□ -0.84
COMMD4-205ENST00000562310 NUPR2A6NF83 97 aa9.78□□□□□ -0.84
COMMD4-205ENST00000562310 PCP4L1A6NKN8 68 aa9.78□□□□□ -0.84
COMMD4-205ENST00000562310 IGLL5B9A064 214 aa9.78□□□□□ -0.84
COMMD4-205ENST00000562310 DDTP30046 118 aa9.78□□□□□ -0.84
COMMD4-205ENST00000562310 NMUP48645 174 aa9.78□□□□□ -0.84
COMMD4-205ENST00000562310 LINC00242Q5T6M2 205 aa9.78□□□□□ -0.84
COMMD4-205ENST00000562310 SLC25A34Q6PIV7 304 aa9.78□□□□□ -0.84
COMMD4-205ENST00000562310 LINC00469Q8N7U9 141 aa9.78□□□□□ -0.84
COMMD4-205ENST00000562310 TMEM223A0PJW6 202 aa9.77□□□□□ -0.85
COMMD4-205ENST00000562310 DLEU1O43261 78 aa9.77□□□□□ -0.85
COMMD4-205ENST00000562310 ANGP03950 147 aaKnown RBP9.77□□□□□ -0.85
COMMD4-205ENST00000562310 CCL18P55774 89 aa9.77□□□□□ -0.85
COMMD4-205ENST00000562310 SS18Q15532 418 aa9.77□□□□□ -0.85
COMMD4-205ENST00000562310 C14orf144Q96I85 54 aa9.77□□□□□ -0.85
COMMD4-205ENST00000562310 MRPS16Q9Y3D3 137 aaKnown RBP9.77□□□□□ -0.85
COMMD4-205ENST00000562310 STAB2Q8WWQ8 2551 aa9.76□□□□□ -0.85
COMMD4-205ENST00000562310 KLK5Q9Y337 293 aaPredicted RBP9.76□□□□□ -0.85
COMMD4-205ENST00000562310 IGKV2D-26A0A0A0MRZ7 120 aa9.75□□□□□ -0.85
COMMD4-205ENST00000562310 LINC00959A0A1B0GUT2 108 aa9.75□□□□□ -0.85
COMMD4-205ENST00000562310 TCTAP57738 103 aa9.75□□□□□ -0.85
COMMD4-205ENST00000562310 WFDC10BQ8IUB3 73 aa9.75□□□□□ -0.85
COMMD4-205ENST00000562310 BOD1L2Q8IYS8 172 aa9.75□□□□□ -0.85
COMMD4-205ENST00000562310 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
COMMD4-205ENST00000562310 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
COMMD4-205ENST00000562310 IGKV3OR2-268A0A0C4DH90 116 aa9.74□□□□□ -0.85
COMMD4-205ENST00000562310 LEPROTO15243 131 aa9.74□□□□□ -0.85
COMMD4-205ENST00000562310 HNRNPA3P51991 378 aaKnown RBP9.74□□□□□ -0.85
COMMD4-205ENST00000562310 REG3AQ06141 175 aa9.74□□□□□ -0.85
COMMD4-205ENST00000562310 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
COMMD4-205ENST00000562310 LINC00269Q8N2A0 174 aa9.74□□□□□ -0.85
COMMD4-205ENST00000562310 CDKN2A-AS1Q9UH64 79 aa9.74□□□□□ -0.85
COMMD4-205ENST00000562310 COL7A1Q02388 2944 aa9.74□□□□□ -0.85
COMMD4-205ENST00000562310 CRPP02741 224 aa9.73□□□□□ -0.85
COMMD4-205ENST00000562310 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
COMMD4-205ENST00000562310 PRR34Q9NV39 138 aa9.73□□□□□ -0.85
COMMD4-205ENST00000562310 IGHV1-58A0A0C4DH39 117 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 IGHV3-30P01768 117 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 IGHV3-33P01772 117 aa9.72□□□□□ -0.85
COMMD4-205ENST00000562310 DNAH10OSP0CZ25 163 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms