RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 BEAN1Q3B7T3 259 aa11.92□□□□□ -0.5
TPM1-228ENST00000560975 PRIMA1Q86XR5 153 aa11.92□□□□□ -0.5
TPM1-228ENST00000560975 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
TPM1-228ENST00000560975 TRAV13-1A0A0B4J241 112 aa11.91□□□□□ -0.5
TPM1-228ENST00000560975 KLRB1Q12918 225 aa11.91□□□□□ -0.5
TPM1-228ENST00000560975 PEMTQ9UBM1 199 aa11.91□□□□□ -0.5
TPM1-228ENST00000560975 LY6DQ14210 128 aa11.91□□□□□ -0.5
TPM1-228ENST00000560975 TRACP01848 142 aa11.9□□□□□ -0.5
TPM1-228ENST00000560975 COX7CP15954 63 aa11.9□□□□□ -0.5
TPM1-228ENST00000560975 SDIM1Q6ZPB5 146 aa11.9□□□□□ -0.5
TPM1-228ENST00000560975 hADV29S1A0JD25 119 aa11.9□□□□□ -0.5
TPM1-228ENST00000560975 LINC00242Q5T6M2 205 aa11.9□□□□□ -0.5
TPM1-228ENST00000560975 C5orf38Q86SI9 138 aa11.9□□□□□ -0.5
TPM1-228ENST00000560975 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
TPM1-228ENST00000560975 CFHR3Q02985 330 aa11.89□□□□□ -0.51
TPM1-228ENST00000560975 IGLV5-45A0A087WSX0 123 aa11.89□□□□□ -0.51
TPM1-228ENST00000560975 IGKV3D-7A0A0C4DH55 119 aa11.88□□□□□ -0.51
TPM1-228ENST00000560975 DEFB131AP59861 70 aa11.88□□□□□ -0.51
TPM1-228ENST00000560975 FAM19A5Q7Z5A7 132 aaPredicted RBP11.88□□□□□ -0.51
TPM1-228ENST00000560975 CYSTM1Q9H1C7 97 aa11.88□□□□□ -0.51
TPM1-228ENST00000560975 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 IGLV5-39A0A0G2JS06 123 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 SMIM1B2RUZ4 78 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 C2orf48Q96LS8 159 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 CUBNO60494 3623 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 J3KT08 172 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 MALP21145 153 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 PSMB8P28062 276 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 CXCL5P42830 114 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 ATP5J2P56134 94 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 PIMREGQ9BSJ6 248 aa11.87□□□□□ -0.51
TPM1-228ENST00000560975 ATP5G1P05496 136 aa11.86□□□□□ -0.51
TPM1-228ENST00000560975 INAFM2P0DMQ5 153 aa11.86□□□□□ -0.51
TPM1-228ENST00000560975 C9orf129Q5T035 196 aaKnown RBP11.86□□□□□ -0.51
TPM1-228ENST00000560975 CSMD2Q7Z408 3487 aa11.85□□□□□ -0.51
TPM1-228ENST00000560975 RBMY1BA6NDE4 496 aaKnown RBP11.85□□□□□ -0.51
TPM1-228ENST00000560975 RBMY1EA6NEQ0 496 aaKnown RBP11.85□□□□□ -0.51
TPM1-228ENST00000560975 RBMY1DP0C7P1 496 aaKnown RBP11.85□□□□□ -0.51
TPM1-228ENST00000560975 ZNF415Q09FC8 603 aa11.85□□□□□ -0.51
TPM1-228ENST00000560975 C14orf132Q9NPU4 83 aa11.85□□□□□ -0.51
TPM1-228ENST00000560975 MUC6Q6W4X9 2439 aa11.84□□□□□ -0.51
TPM1-228ENST00000560975 COPS9Q8WXC6 57 aa11.84□□□□□ -0.51
TPM1-228ENST00000560975 DNAL4O96015 105 aa11.84□□□□□ -0.51
TPM1-228ENST00000560975 IGHV3-53P01767 116 aa11.84□□□□□ -0.51
TPM1-228ENST00000560975 A0A087WVE0 104 aa11.83□□□□□ -0.52
TPM1-228ENST00000560975 ATOX1O00244 68 aa11.83□□□□□ -0.52
TPM1-228ENST00000560975 HIST2H2BCQ6DN03 193 aa11.83□□□□□ -0.52
TPM1-228ENST00000560975 HIST2H2BDQ6DRA6 164 aa11.83□□□□□ -0.52
TPM1-228ENST00000560975 LRRC75A-AS1Q8N1F1 130 aa11.83□□□□□ -0.52
TPM1-228ENST00000560975 A0A1B0GX51 115 aa11.82□□□□□ -0.52
TPM1-228ENST00000560975 FAM222AQ5U5X8 452 aa11.82□□□□□ -0.52
TPM1-228ENST00000560975 A0A087WYN8 130 aa11.82□□□□□ -0.52
TPM1-228ENST00000560975 CRYGAP11844 174 aa11.82□□□□□ -0.52
TPM1-228ENST00000560975 SMIM9A6NGZ8 99 aa11.81□□□□□ -0.52
TPM1-228ENST00000560975 CRPP02741 224 aa11.81□□□□□ -0.52
TPM1-228ENST00000560975 LINC00337Q8N6G1 96 aa11.81□□□□□ -0.52
TPM1-228ENST00000560975 KIR2DL5BQ8NHK3 375 aa11.81□□□□□ -0.52
TPM1-228ENST00000560975 CELSR2Q9HCU4 2923 aa11.81□□□□□ -0.52
TPM1-228ENST00000560975 IGHV4-59P01825 116 aa11.81□□□□□ -0.52
TPM1-228ENST00000560975 AVPP01185 164 aa11.8□□□□□ -0.52
TPM1-228ENST00000560975 HIST1H4AP62805 103 aaKnown RBP11.8□□□□□ -0.52
TPM1-228ENST00000560975 C5orf47Q569G3 176 aa11.8□□□□□ -0.52
TPM1-228ENST00000560975 RPL18AQ02543 176 aaKnown RBP11.79□□□□□ -0.52
TPM1-228ENST00000560975 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
TPM1-228ENST00000560975 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
TPM1-228ENST00000560975 DEFB136Q30KP8 78 aa11.79□□□□□ -0.52
TPM1-228ENST00000560975 MIR7-3HGQ8N6C7 128 aa11.79□□□□□ -0.52
TPM1-228ENST00000560975 Q96MF0 132 aa11.79□□□□□ -0.52
TPM1-228ENST00000560975 LINC00846Q9NV44 126 aa11.79□□□□□ -0.52
TPM1-228ENST00000560975 PRORYQ9H606 182 aa11.78□□□□□ -0.52
TPM1-228ENST00000560975 TRAV13-2A0A0B4J235 113 aa11.78□□□□□ -0.52
TPM1-228ENST00000560975 RPL28P46779 137 aaKnown RBP11.78□□□□□ -0.52
TPM1-228ENST00000560975 RNF152Q8N8N0 203 aa11.78□□□□□ -0.52
TPM1-228ENST00000560975 C11orf72Q8NBR9 251 aa11.78□□□□□ -0.52
TPM1-228ENST00000560975 F5H768 121 aa11.77□□□□□ -0.52
TPM1-228ENST00000560975 IGKV3OR2-268A0A0C4DH90 116 aa11.77□□□□□ -0.53
TPM1-228ENST00000560975 SMIM11BQ8TCY0 68 aa11.77□□□□□ -0.53
TPM1-228ENST00000560975 SND1-IT1Q9HBX3 110 aa11.77□□□□□ -0.53
TPM1-228ENST00000560975 IGKV2-28A0A075B6P5 120 aa11.77□□□□□ -0.53
TPM1-228ENST00000560975 NCR3O14931 201 aa11.77□□□□□ -0.53
TPM1-228ENST00000560975 IGKV2D-28P01615 120 aa11.77□□□□□ -0.53
TPM1-228ENST00000560975 SLPIP03973 132 aa11.76□□□□□ -0.53
TPM1-228ENST00000560975 SLURP1P55000 103 aa11.76□□□□□ -0.53
TPM1-228ENST00000560975 TMEM89A2RUT3 159 aa11.75□□□□□ -0.53
TPM1-228ENST00000560975 NTM-AS1Q6ZSK4 140 aa11.75□□□□□ -0.53
TPM1-228ENST00000560975 DSCR8Q96T75 97 aa11.75□□□□□ -0.53
TPM1-228ENST00000560975 IGHV4-30-2A0A087WSY4 118 aa11.75□□□□□ -0.53
TPM1-228ENST00000560975 C18orf65Q6ZTR6 163 aa11.75□□□□□ -0.53
TPM1-228ENST00000560975 TRGV1A0A0A0MS02 117 aa11.74□□□□□ -0.53
TPM1-228ENST00000560975 LECT2O14960 151 aa11.74□□□□□ -0.53
TPM1-228ENST00000560975 LINC00158P58513 81 aa11.74□□□□□ -0.53
TPM1-228ENST00000560975 XCL2Q9UBD3 114 aa11.74□□□□□ -0.53
TPM1-228ENST00000560975 DEFB112Q30KQ8 113 aa11.74□□□□□ -0.53
TPM1-228ENST00000560975 MSMBP08118 114 aa11.73□□□□□ -0.53
TPM1-228ENST00000560975 CDC42SE2Q9NRR3 84 aa11.73□□□□□ -0.53
TPM1-228ENST00000560975 UBE2E2Q96LR5 201 aa11.73□□□□□ -0.53
TPM1-228ENST00000560975 LINC01561Q8N1V8 128 aa11.73□□□□□ -0.53
TPM1-228ENST00000560975 SERP2Q8N6R1 65 aa11.73□□□□□ -0.53
TPM1-228ENST00000560975 OR13C6PQ8NH95 151 aa11.73□□□□□ -0.53
TPM1-228ENST00000560975 C10orf105Q8TEF2 133 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms