RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
AC087878.1-201ENST00000560709 UBE2D4Q9Y2X8 147 aa8.29□□□□□ -1.08
AC087878.1-201ENST00000560709 MRPS16Q9Y3D3 137 aaKnown RBP8.29□□□□□ -1.08
AC087878.1-201ENST00000560709 CMYA5Q8N3K9 4069 aa8.29□□□□□ -1.08
AC087878.1-201ENST00000560709 DNAH3Q8TD57 4116 aa8.29□□□□□ -1.08
AC087878.1-201ENST00000560709 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
AC087878.1-201ENST00000560709 LOC100131303A0A0U1RQF7 123 aa8.28□□□□□ -1.08
AC087878.1-201ENST00000560709 LCE2BO14633 110 aa8.28□□□□□ -1.08
AC087878.1-201ENST00000560709 TIRAPP58753 221 aa8.28□□□□□ -1.08
AC087878.1-201ENST00000560709 SEC11AP67812 179 aa8.28□□□□□ -1.08
AC087878.1-201ENST00000560709 LBHQ53QV2 105 aaPredicted RBP8.28□□□□□ -1.08
AC087878.1-201ENST00000560709 AMMECR1LQ6DCA0 310 aa8.28□□□□□ -1.08
AC087878.1-201ENST00000560709 VSIG2Q96IQ7 327 aa8.28□□□□□ -1.08
AC087878.1-201ENST00000560709 MGAM2Q2M2H8 2515 aa8.27□□□□□ -1.09
AC087878.1-201ENST00000560709 SIVA1O15304 175 aa8.27□□□□□ -1.09
AC087878.1-201ENST00000560709 HTN3P15516 51 aa8.27□□□□□ -1.09
AC087878.1-201ENST00000560709 NTM-AS1Q6ZSK4 140 aa8.27□□□□□ -1.09
AC087878.1-201ENST00000560709 NFE4Q86UQ8 179 aa8.27□□□□□ -1.09
AC087878.1-201ENST00000560709 STPG4Q8N801 248 aa8.27□□□□□ -1.09
AC087878.1-201ENST00000560709 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
AC087878.1-201ENST00000560709 AMELXQ99217 191 aa8.27□□□□□ -1.09
AC087878.1-201ENST00000560709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.26□□□□□ -1.09
AC087878.1-201ENST00000560709 TRAV10A0A0B4J240 114 aa8.26□□□□□ -1.09
AC087878.1-201ENST00000560709 A0A0J9YY99 117 aa8.26□□□□□ -1.09
AC087878.1-201ENST00000560709 IGKV2-29A2NJV5 120 aaPredicted RBP8.26□□□□□ -1.09
AC087878.1-201ENST00000560709 M0R143 59 aa8.26□□□□□ -1.09
AC087878.1-201ENST00000560709 FGF6P10767 208 aa8.26□□□□□ -1.09
AC087878.1-201ENST00000560709 Q6ZTC4 211 aa8.26□□□□□ -1.09
AC087878.1-201ENST00000560709 OR5A1Q8NGJ0 315 aa8.26□□□□□ -1.09
AC087878.1-201ENST00000560709 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
AC087878.1-201ENST00000560709 NMUP48645 174 aa8.25□□□□□ -1.09
AC087878.1-201ENST00000560709 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
AC087878.1-201ENST00000560709 DEFB131BA0A096LNP1 70 aa8.24□□□□□ -1.09
AC087878.1-201ENST00000560709 E9PLD3 99 aa8.24□□□□□ -1.09
AC087878.1-201ENST00000560709 LELP1Q5T871 98 aa8.24□□□□□ -1.09
AC087878.1-201ENST00000560709 BOD1L2Q8IYS8 172 aa8.24□□□□□ -1.09
AC087878.1-201ENST00000560709 CHCHD5Q9BSY4 110 aa8.24□□□□□ -1.09
AC087878.1-201ENST00000560709 NBEAL2Q6ZNJ1 2754 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 PKD1L1Q8TDX9 2849 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 IGLV4-69A0A075B6H9 119 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 A0A096LPF7 62 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 A0A1B0GUV1 79 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 TINCRA0A1B0GVN0 87 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 CTAG1AP78358 180 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 TMEM170BQ5T4T1 132 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 C15orf53Q8NAA6 179 aa8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 GEMIN7Q9H840 131 aaKnown RBP8.23□□□□□ -1.09
AC087878.1-201ENST00000560709 H3BRM9 83 aa8.22□□□□□ -1.09
AC087878.1-201ENST00000560709 NANOS2P60321 138 aaKnown RBP8.22□□□□□ -1.09
AC087878.1-201ENST00000560709 Q6ZUT4 128 aa8.22□□□□□ -1.09
AC087878.1-201ENST00000560709 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
AC087878.1-201ENST00000560709 CHAC1Q9BUX1 264 aa8.22□□□□□ -1.09
AC087878.1-201ENST00000560709 CDC42SE2Q9NRR3 84 aa8.22□□□□□ -1.09
AC087878.1-201ENST00000560709 NOTCH1P46531 2555 aa8.22□□□□□ -1.09
AC087878.1-201ENST00000560709 HERVK_113P63121 156 aa8.21□□□□□ -1.1
AC087878.1-201ENST00000560709 FAM19A3Q7Z5A8 133 aa8.21□□□□□ -1.1
AC087878.1-201ENST00000560709 PLEKHB2Q96CS7 222 aa8.21□□□□□ -1.1
AC087878.1-201ENST00000560709 HIGD1BQ9P298 99 aa8.21□□□□□ -1.1
AC087878.1-201ENST00000560709 TRAV8-6A0A0B4J262 113 aa8.2□□□□□ -1.1
AC087878.1-201ENST00000560709 A0A0J9YXV3 536 aa8.2□□□□□ -1.1
AC087878.1-201ENST00000560709 CCL25O15444 150 aa8.2□□□□□ -1.1
AC087878.1-201ENST00000560709 UBE2D1P51668 147 aa8.2□□□□□ -1.1
AC087878.1-201ENST00000560709 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
AC087878.1-201ENST00000560709 MYMXA0A1B0GTQ4 84 aa8.19□□□□□ -1.1
AC087878.1-201ENST00000560709 TMEM262E9PQX1 116 aa8.19□□□□□ -1.1
AC087878.1-201ENST00000560709 GAGE6Q13070 117 aa8.19□□□□□ -1.1
AC087878.1-201ENST00000560709 FAM104AQ969W3 186 aa8.19□□□□□ -1.1
AC087878.1-201ENST00000560709 NBEAL1Q6ZS30 2694 aa8.18□□□□□ -1.1
AC087878.1-201ENST00000560709 TMEM223A0PJW6 202 aa8.18□□□□□ -1.1
AC087878.1-201ENST00000560709 LEPROTO15243 131 aa8.18□□□□□ -1.1
AC087878.1-201ENST00000560709 ZNF22P17026 224 aaPredicted RBP8.18□□□□□ -1.1
AC087878.1-201ENST00000560709 LGALS3P17931 250 aaKnown RBP8.18□□□□□ -1.1
AC087878.1-201ENST00000560709 LYPD5Q6UWN5 251 aa8.18□□□□□ -1.1
AC087878.1-201ENST00000560709 PCP2Q8IVA1 136 aa8.18□□□□□ -1.1
AC087878.1-201ENST00000560709 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
AC087878.1-201ENST00000560709 HSD52Q0P140 79 aa8.17□□□□□ -1.1
AC087878.1-201ENST00000560709 TAL2Q16559 108 aa8.17□□□□□ -1.1
AC087878.1-201ENST00000560709 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
AC087878.1-201ENST00000560709 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
AC087878.1-201ENST00000560709 J3QQQ9 107 aa8.16□□□□□ -1.1
AC087878.1-201ENST00000560709 TCTAP57738 103 aa8.16□□□□□ -1.1
AC087878.1-201ENST00000560709 RBX1P62877 108 aa8.16□□□□□ -1.1
AC087878.1-201ENST00000560709 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
AC087878.1-201ENST00000560709 SNHG12Q9BXW3 62 aa8.16□□□□□ -1.1
AC087878.1-201ENST00000560709 IGHV1-58A0A0C4DH39 117 aa8.15□□□□□ -1.1
AC087878.1-201ENST00000560709 ZNF815PA8K554 130 aa8.15□□□□□ -1.1
AC087878.1-201ENST00000560709 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
AC087878.1-201ENST00000560709 C2orf91Q6ZV80 131 aa8.15□□□□□ -1.1
AC087878.1-201ENST00000560709 IGLV4-60A0A075B6I1 120 aa8.14□□□□□ -1.11
AC087878.1-201ENST00000560709 TRAV13-1A0A0B4J241 112 aa8.14□□□□□ -1.11
AC087878.1-201ENST00000560709 SS18Q15532 418 aa8.14□□□□□ -1.11
AC087878.1-201ENST00000560709 MPV17L2Q567V2 206 aa8.14□□□□□ -1.11
AC087878.1-201ENST00000560709 LINC00242Q5T6M2 205 aa8.14□□□□□ -1.11
AC087878.1-201ENST00000560709 SCGB1D4Q6XE38 83 aa8.14□□□□□ -1.11
AC087878.1-201ENST00000560709 A6NDN8 102 aa8.13□□□□□ -1.11
AC087878.1-201ENST00000560709 HINT1P49773 126 aaPredicted RBP8.13□□□□□ -1.11
AC087878.1-201ENST00000560709 BATFQ16520 125 aa8.13□□□□□ -1.11
AC087878.1-201ENST00000560709 MAPKAPK5-AS1Q8N8E1 139 aa8.13□□□□□ -1.11
AC087878.1-201ENST00000560709 NUPR2A6NF83 97 aa8.12□□□□□ -1.11
AC087878.1-201ENST00000560709 ANGP03950 147 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms