RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 PPP1R17O96001 155 aa11.65□□□□□ -0.54
TPM1-224ENST00000560615 ESDP10768 282 aa11.65□□□□□ -0.54
TPM1-224ENST00000560615 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
TPM1-224ENST00000560615 ISOC2Q96AB3 205 aa11.65□□□□□ -0.54
TPM1-224ENST00000560615 TMEM242Q9NWH2 141 aa11.65□□□□□ -0.54
TPM1-224ENST00000560615 A0A096LNI7 61 aa11.64□□□□□ -0.55
TPM1-224ENST00000560615 C7orf77A4D0Y5 90 aa11.64□□□□□ -0.55
TPM1-224ENST00000560615 PRR3P79522 188 aaKnown RBP11.64□□□□□ -0.55
TPM1-224ENST00000560615 MRPL52Q86TS9 123 aaKnown RBP11.64□□□□□ -0.55
TPM1-224ENST00000560615 TSKUQ8WUA8 353 aa11.64□□□□□ -0.55
TPM1-224ENST00000560615 EIF5A2Q9GZV4 153 aaKnown RBP11.64□□□□□ -0.55
TPM1-224ENST00000560615 HIGD1CA8MV81 97 aa11.63□□□□□ -0.55
TPM1-224ENST00000560615 TSHBP01222 138 aa11.63□□□□□ -0.55
TPM1-224ENST00000560615 MALP21145 153 aa11.63□□□□□ -0.55
TPM1-224ENST00000560615 FCER1GP30273 86 aa11.63□□□□□ -0.55
TPM1-224ENST00000560615 REG3GQ6UW15 175 aa11.63□□□□□ -0.55
TPM1-224ENST00000560615 ZNF664Q8N3J9 261 aa11.63□□□□□ -0.55
TPM1-224ENST00000560615 SMIM7Q9BQ49 75 aa11.63□□□□□ -0.55
TPM1-224ENST00000560615 CDC42SE2Q9NRR3 84 aa11.63□□□□□ -0.55
TPM1-224ENST00000560615 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
TPM1-224ENST00000560615 VCYO14598 125 aa11.62□□□□□ -0.55
TPM1-224ENST00000560615 SYCNQ0VAF6 134 aa11.62□□□□□ -0.55
TPM1-224ENST00000560615 ALKAL2Q6UX46 152 aa11.62□□□□□ -0.55
TPM1-224ENST00000560615 LINC01600Q96MT4 127 aa11.62□□□□□ -0.55
TPM1-224ENST00000560615 PKHD1L1Q86WI1 4243 aa11.62□□□□□ -0.55
TPM1-224ENST00000560615 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
TPM1-224ENST00000560615 RAB4AP20338 218 aa11.61□□□□□ -0.55
TPM1-224ENST00000560615 POLR2KP53803 58 aaKnown RBP11.61□□□□□ -0.55
TPM1-224ENST00000560615 RIGQ13278 110 aa11.61□□□□□ -0.55
TPM1-224ENST00000560615 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
TPM1-224ENST00000560615 AKAP14Q86UN6 197 aa11.61□□□□□ -0.55
TPM1-224ENST00000560615 Q6ZRP5 223 aa11.6□□□□□ -0.55
TPM1-224ENST00000560615 TMEM18Q96B42 140 aa11.6□□□□□ -0.55
TPM1-224ENST00000560615 KIR2DL4Q99706 377 aa11.6□□□□□ -0.55
TPM1-224ENST00000560615 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
TPM1-224ENST00000560615 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
TPM1-224ENST00000560615 CAMPP49913 170 aa11.59□□□□□ -0.55
TPM1-224ENST00000560615 LINC01551Q86U37 167 aa11.59□□□□□ -0.55
TPM1-224ENST00000560615 CSDC2Q9Y534 153 aaKnown RBP11.59□□□□□ -0.55
TPM1-224ENST00000560615 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
TPM1-224ENST00000560615 COX7A2LO14548 114 aa11.58□□□□□ -0.56
TPM1-224ENST00000560615 PPP1R2P9O14990 202 aa11.58□□□□□ -0.56
TPM1-224ENST00000560615 AMN1Q8IY45 258 aa11.58□□□□□ -0.56
TPM1-224ENST00000560615 APOMO95445 188 aa11.57□□□□□ -0.56
TPM1-224ENST00000560615 LINC00526Q96FQ7 95 aa11.57□□□□□ -0.56
TPM1-224ENST00000560615 IGLV4-69A0A075B6H9 119 aa11.56□□□□□ -0.56
TPM1-224ENST00000560615 GAS8-AS1O95177 125 aa11.56□□□□□ -0.56
TPM1-224ENST00000560615 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
TPM1-224ENST00000560615 A0A0J9YXV3 536 aa11.55□□□□□ -0.56
TPM1-224ENST00000560615 TCAPO15273 167 aa11.55□□□□□ -0.56
TPM1-224ENST00000560615 PTTG1IPP53801 180 aa11.55□□□□□ -0.56
TPM1-224ENST00000560615 GAGE2BQ13066 116 aa11.55□□□□□ -0.56
TPM1-224ENST00000560615 CAMK2N2Q96S95 79 aa11.55□□□□□ -0.56
TPM1-224ENST00000560615 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
TPM1-224ENST00000560615 UBR4Q5T4S7 5183 aa11.54□□□□□ -0.56
TPM1-224ENST00000560615 FAM74A3Q4VXF1 159 aa11.53□□□□□ -0.56
TPM1-224ENST00000560615 NUP35Q8NFH5 326 aa11.53□□□□□ -0.56
TPM1-224ENST00000560615 C2orf48Q96LS8 159 aa11.53□□□□□ -0.56
TPM1-224ENST00000560615 UBE2D4Q9Y2X8 147 aa11.53□□□□□ -0.56
TPM1-224ENST00000560615 TRAV13-1A0A0B4J241 112 aa11.52□□□□□ -0.57
TPM1-224ENST00000560615 LINC00862A6NCI5 91 aa11.52□□□□□ -0.57
TPM1-224ENST00000560615 TMEM241Q24JQ0 296 aa11.52□□□□□ -0.57
TPM1-224ENST00000560615 V9GYV3 84 aa11.52□□□□□ -0.57
TPM1-224ENST00000560615 SMKR1H3BMG3 65 aa11.51□□□□□ -0.57
TPM1-224ENST00000560615 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
TPM1-224ENST00000560615 C20orf78Q9BR46 151 aa11.51□□□□□ -0.57
TPM1-224ENST00000560615 TIMM21Q9BVV7 248 aa11.51□□□□□ -0.57
TPM1-224ENST00000560615 A0A1B0GW15 77 aa11.5□□□□□ -0.57
TPM1-224ENST00000560615 SRSF9Q13242 221 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM1-224ENST00000560615 FAM104BQ5XKR9 115 aa11.49□□□□□ -0.57
TPM1-224ENST00000560615 NRACQ8N912 160 aa11.49□□□□□ -0.57
TPM1-224ENST00000560615 F8WDY8 70 aa11.48□□□□□ -0.57
TPM1-224ENST00000560615 S100A8P05109 93 aa11.48□□□□□ -0.57
TPM1-224ENST00000560615 CKS2P33552 79 aa11.48□□□□□ -0.57
TPM1-224ENST00000560615 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
TPM1-224ENST00000560615 RNF151Q2KHN1 245 aa11.48□□□□□ -0.57
TPM1-224ENST00000560615 RNASE13Q5GAN3 156 aaKnown RBP11.48□□□□□ -0.57
TPM1-224ENST00000560615 C5orf38Q86SI9 138 aa11.48□□□□□ -0.57
TPM1-224ENST00000560615 OR10D4PQ8NGN7 298 aa11.48□□□□□ -0.57
TPM1-224ENST00000560615 MT-ND6P03923 174 aa11.47□□□□□ -0.57
TPM1-224ENST00000560615 KRTAP10-8P60410 259 aa11.47□□□□□ -0.57
TPM1-224ENST00000560615 SPAG11BQ08648 103 aa11.47□□□□□ -0.57
TPM1-224ENST00000560615 hCG_2014768A0A024R1R8 64 aa11.46□□□□□ -0.57
TPM1-224ENST00000560615 TRBV24-1A0A075B6N3 115 aa11.46□□□□□ -0.57
TPM1-224ENST00000560615 F8W036 122 aa11.46□□□□□ -0.57
TPM1-224ENST00000560615 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
TPM1-224ENST00000560615 ADIRFQ15847 76 aa11.46□□□□□ -0.57
TPM1-224ENST00000560615 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.57
TPM1-224ENST00000560615 Q6ZUT4 128 aa11.46□□□□□ -0.57
TPM1-224ENST00000560615 IMMP2LQ96T52 175 aa11.46□□□□□ -0.57
TPM1-224ENST00000560615 NAT8Q9UHE5 227 aa11.46□□□□□ -0.57
TPM1-224ENST00000560615 RPL23P62829 140 aaKnown RBP11.45□□□□□ -0.58
TPM1-224ENST00000560615 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
TPM1-224ENST00000560615 SPANXA1Q9NS26 97 aa11.45□□□□□ -0.58
TPM1-224ENST00000560615 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
TPM1-224ENST00000560615 SMIM27A0A1W2PRY6 76 aa11.44□□□□□ -0.58
TPM1-224ENST00000560615 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.44□□□□□ -0.58
TPM1-224ENST00000560615 MRPL35Q9NZE8 188 aaKnown RBP11.43□□□□□ -0.58
TPM1-224ENST00000560615 NDUFA1O15239 70 aa11.42□□□□□ -0.58
TPM1-224ENST00000560615 TNFRSF6BO95407 300 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms