RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 TRBV20OR9-2A0A075B6H5 130 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 H0Y9J4 135 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 GNG4P50150 75 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 CD164L2Q6UWJ8 174 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 TSKUQ8WUA8 353 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 BTF3L4Q96K17 158 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 FAM210AQ96ND0 272 aa8.61□□□□□ -1.03
IRF9-210ENST00000560542 EIF5A2Q9GZV4 153 aaKnown RBP8.61□□□□□ -1.03
IRF9-210ENST00000560542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.6□□□□□ -1.03
IRF9-210ENST00000560542 IGKV2-29A2NJV5 120 aaPredicted RBP8.6□□□□□ -1.03
IRF9-210ENST00000560542 TMEM250H0YL14 139 aa8.6□□□□□ -1.03
IRF9-210ENST00000560542 APOMO95445 188 aa8.6□□□□□ -1.03
IRF9-210ENST00000560542 C9orf116Q5BN46 136 aaPredicted RBP8.6□□□□□ -1.03
IRF9-210ENST00000560542 SMIM12Q96EX1 92 aa8.6□□□□□ -1.03
IRF9-210ENST00000560542 TMEM101Q96IK0 257 aa8.6□□□□□ -1.03
IRF9-210ENST00000560542 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
IRF9-210ENST00000560542 IGLV4-69A0A075B6H9 119 aa8.59□□□□□ -1.03
IRF9-210ENST00000560542 RPL13AP40429 203 aaKnown RBP8.59□□□□□ -1.03
IRF9-210ENST00000560542 SS18Q15532 418 aa8.59□□□□□ -1.03
IRF9-210ENST00000560542 CNFNQ9BYD5 112 aa8.59□□□□□ -1.03
IRF9-210ENST00000560542 C19orf71A6NCJ1 209 aa8.58□□□□□ -1.04
IRF9-210ENST00000560542 CTRLP40313 264 aa8.58□□□□□ -1.04
IRF9-210ENST00000560542 CEBPGP53567 150 aa8.58□□□□□ -1.04
IRF9-210ENST00000560542 LYZL1Q6UWQ5 148 aa8.58□□□□□ -1.04
IRF9-210ENST00000560542 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
IRF9-210ENST00000560542 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
IRF9-210ENST00000560542 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
IRF9-210ENST00000560542 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
IRF9-210ENST00000560542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.56□□□□□ -1.04
IRF9-210ENST00000560542 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
IRF9-210ENST00000560542 MALP21145 153 aa8.56□□□□□ -1.04
IRF9-210ENST00000560542 UBE2D1P51668 147 aa8.56□□□□□ -1.04
IRF9-210ENST00000560542 PHF5AQ7RTV0 110 aaKnown RBP8.56□□□□□ -1.04
IRF9-210ENST00000560542 C2orf48Q96LS8 159 aa8.56□□□□□ -1.04
IRF9-210ENST00000560542 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
IRF9-210ENST00000560542 I3L3M4 83 aa8.55□□□□□ -1.04
IRF9-210ENST00000560542 K7EN84 100 aa8.55□□□□□ -1.04
IRF9-210ENST00000560542 RPL18AQ02543 176 aaKnown RBP8.55□□□□□ -1.04
IRF9-210ENST00000560542 TWIST1Q15672 202 aa8.55□□□□□ -1.04
IRF9-210ENST00000560542 MRPL52Q86TS9 123 aaKnown RBP8.55□□□□□ -1.04
IRF9-210ENST00000560542 OCC1Q8TAD7 63 aa8.55□□□□□ -1.04
IRF9-210ENST00000560542 SMIM7Q9BQ49 75 aa8.55□□□□□ -1.04
IRF9-210ENST00000560542 BIN3Q9NQY0 253 aa8.55□□□□□ -1.04
IRF9-210ENST00000560542 COX7A2LO14548 114 aa8.54□□□□□ -1.04
IRF9-210ENST00000560542 RAB14P61106 215 aa8.54□□□□□ -1.04
IRF9-210ENST00000560542 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
IRF9-210ENST00000560542 RNF151Q2KHN1 245 aa8.54□□□□□ -1.04
IRF9-210ENST00000560542 RPL39LQ96EH5 51 aaKnown RBP8.54□□□□□ -1.04
IRF9-210ENST00000560542 MRAP2Q96G30 205 aa8.54□□□□□ -1.04
IRF9-210ENST00000560542 CDC42SE2Q9NRR3 84 aa8.54□□□□□ -1.04
IRF9-210ENST00000560542 A0A087WZ39 114 aa8.53□□□□□ -1.04
IRF9-210ENST00000560542 ZNF727A8MUV8 499 aa8.53□□□□□ -1.04
IRF9-210ENST00000560542 C9JQL5 133 aa8.53□□□□□ -1.04
IRF9-210ENST00000560542 ESDP10768 282 aa8.53□□□□□ -1.04
IRF9-210ENST00000560542 IFITM2Q01629 132 aa8.53□□□□□ -1.04
IRF9-210ENST00000560542 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
IRF9-210ENST00000560542 NUDT10Q8NFP7 164 aa8.53□□□□□ -1.04
IRF9-210ENST00000560542 NUDT11Q96G61 164 aa8.53□□□□□ -1.04
IRF9-210ENST00000560542 CARHSP1Q9Y2V2 147 aaKnown RBP8.53□□□□□ -1.04
IRF9-210ENST00000560542 TRBV6-5A0A0K0K1A5 114 aa8.52□□□□□ -1.05
IRF9-210ENST00000560542 C1orf196B1AJZ1 125 aa8.52□□□□□ -1.05
IRF9-210ENST00000560542 PMCHP20382 165 aa8.52□□□□□ -1.05
IRF9-210ENST00000560542 PEA15Q15121 130 aa8.52□□□□□ -1.05
IRF9-210ENST00000560542 RNASE7Q9H1E1 156 aaKnown RBP8.52□□□□□ -1.05
IRF9-210ENST00000560542 F8WDY8 70 aa8.5□□□□□ -1.05
IRF9-210ENST00000560542 CLLU1Q5K131 121 aa8.5□□□□□ -1.05
IRF9-210ENST00000560542 LINC01551Q86U37 167 aa8.5□□□□□ -1.05
IRF9-210ENST00000560542 SMDT1Q9H4I9 107 aa8.5□□□□□ -1.05
IRF9-210ENST00000560542 RPP21Q9H633 154 aaKnown RBP8.5□□□□□ -1.05
IRF9-210ENST00000560542 TSHBP01222 138 aa8.49□□□□□ -1.05
IRF9-210ENST00000560542 FAM74A3Q4VXF1 159 aa8.49□□□□□ -1.05
IRF9-210ENST00000560542 FAM231DQ6ZW35 169 aa8.49□□□□□ -1.05
IRF9-210ENST00000560542 IMMP2LQ96T52 175 aa8.49□□□□□ -1.05
IRF9-210ENST00000560542 MRPL35Q9NZE8 188 aaKnown RBP8.49□□□□□ -1.05
IRF9-210ENST00000560542 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
IRF9-210ENST00000560542 C7orf77A4D0Y5 90 aa8.48□□□□□ -1.05
IRF9-210ENST00000560542 GATCO43716 136 aaKnown RBP8.48□□□□□ -1.05
IRF9-210ENST00000560542 SMAGPQ0VAQ4 97 aa8.48□□□□□ -1.05
IRF9-210ENST00000560542 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
IRF9-210ENST00000560542 OR10D4PQ8NGN7 298 aa8.48□□□□□ -1.05
IRF9-210ENST00000560542 TLX1NBP0CAT3 122 aa8.47□□□□□ -1.05
IRF9-210ENST00000560542 RPL23P62829 140 aaKnown RBP8.47□□□□□ -1.05
IRF9-210ENST00000560542 SPAG11BQ08648 103 aa8.47□□□□□ -1.05
IRF9-210ENST00000560542 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
IRF9-210ENST00000560542 OPRPNQ99935 248 aaPredicted RBP8.47□□□□□ -1.05
IRF9-210ENST00000560542 ST20Q9HBF5 79 aa8.47□□□□□ -1.05
IRF9-210ENST00000560542 TMEM242Q9NWH2 141 aa8.47□□□□□ -1.05
IRF9-210ENST00000560542 NAT8Q9UHE5 227 aa8.47□□□□□ -1.05
IRF9-210ENST00000560542 TRBV27A0A0K0K1C4 114 aa8.46□□□□□ -1.06
IRF9-210ENST00000560542 ADIRFQ15847 76 aa8.46□□□□□ -1.06
IRF9-210ENST00000560542 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
IRF9-210ENST00000560542 A8MWL6 223 aa8.45□□□□□ -1.06
IRF9-210ENST00000560542 CT83Q5H943 113 aa8.45□□□□□ -1.06
IRF9-210ENST00000560542 FAM168BA1KXE4 195 aa8.44□□□□□ -1.06
IRF9-210ENST00000560542 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
IRF9-210ENST00000560542 NDUFA1O15239 70 aa8.43□□□□□ -1.06
IRF9-210ENST00000560542 FOXA3P55318 350 aaPredicted RBP8.43□□□□□ -1.06
IRF9-210ENST00000560542 UBE2BP63146 152 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms